Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p72440 Brassica napus HOM05D003012 ORTHO05D002833 1.4e-77 292.7 136 100.0
BraA10t45221Z Brassica rapa HOM05D003012 ORTHO05D002833 2.6e-63 245.4 124 91.1
A10p31760 Brassica napus HOM05D003012 ORTHO05D002833 4.1e-61 238.0 125 88.8
BolC9t59987H Brassica oleracea HOM05D003012 ORTHO05D002833 8.7e-59 230.3 128 86.7
A10p31740 Brassica napus HOM05D003012 ORTHO05D002833 6.4e-54 214.2 127 83.5
A10p31770 Brassica napus HOM05D003012 ORTHO05D002833 2.8e-33 145.6 136 55.9
BraA10t45222Z Brassica rapa HOM05D003012 ORTHO05D002833 2.8e-33 145.6 136 55.9
C09p72460 Brassica napus HOM05D003012 ORTHO05D002833 3.1e-32 142.1 134 56.0
BolC9t59988H Brassica oleracea HOM05D003012 ORTHO05D002833 6.9e-32 141.0 132 59.8
BcaC06g32139 Brassica carinata HOM05D003012 ORTHO05D002833 3.4e-31 138.7 136 55.9
BcaC06g32140 Brassica carinata HOM05D003012 ORTHO05D002833 3.4e-31 138.7 136 55.9
Thhalv10015869m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.3e-30 136.7 136 51.5
C09p72450 Brassica napus HOM05D003012 ORTHO05D002833 3.2e-29 132.1 132 56.8
BolC9t59989H Brassica oleracea HOM05D003012 ORTHO05D002833 7.1e-29 131.0 113 55.8
A10p31750 Brassica napus HOM05D003012 ORTHO05D002833 3.0e-27 125.6 132 56.1
BraA10t45220Z Brassica rapa HOM05D003012 ORTHO05D002833 3.0e-27 125.6 132 56.1
BcaB04g19638 Brassica carinata HOM05D003012 ORTHO05D002833 5.1e-27 124.8 139 51.8
AT5G04350 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 6.9e-24 114.4 135 46.7
Carub.0006s0330 Capsella rubella HOM05D003012 ORTHO05D002833 5.5e-21 104.8 129 46.5
Sp6g38380 Schrenkiella parvula HOM05D003012 ORTHO05D002833 1.7e-17 93.2 104 53.8
CARHR208940 Cardamine hirsuta HOM05D003012 ORTHO05D002833 6.9e-16 87.8 133 39.8
BcaC06g32138 Brassica carinata HOM05D003012 ORTHO05D002833 5.9e-15 84.7 61 57.4
BcaB01g05892 Brassica carinata HOM05D003012 ORTHO05D002833 1.7e-14 83.2 143 38.5
C03p01980 Brassica napus HOM05D003012 ORTHO05D002833 1.7e-14 83.2 143 38.5
BolC3t12752H Brassica oleracea HOM05D003012 ORTHO05D002833 1.7e-14 83.2 143 38.5
C03p02010 Brassica napus HOM05D003012 ORTHO05D002833 2.2e-14 82.8 137 39.4
A03p01630 Brassica napus HOM05D003012 ORTHO05D002833 2.9e-14 82.4 143 38.5
BraA03t09538Z Brassica rapa HOM05D003012 ORTHO05D002833 2.9e-14 82.4 143 38.5
Aa31LG11G5250 Aethionema arabicum HOM05D013273 ORTHO05D002833 3.2e-13 79.0 94 47.9
BcaNung05795 Brassica carinata HOM05D003012 ORTHO05D002833 3.2e-13 79.0 141 36.9
A03p01640 Brassica napus HOM05D000149 ORTHO05D000076 2.7e-12 75.9 116 39.7
BraA03t09539Z Brassica rapa HOM05D000149 ORTHO05D000076 2.7e-12 75.9 116 39.7
THA.LOC104816675 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 3.6e-12 75.5 134 36.6
BcaB01g05894 Brassica carinata HOM05D000149 ORTHO05D000076 6.1e-12 74.7 116 38.8
BolC3t12754H Brassica oleracea HOM05D000149 ORTHO05D000076 6.1e-12 74.7 116 38.8
AL6G13980 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 1.0e-11 73.9 134 35.8
A06p47670 Brassica napus HOM05D004904 ORTHO05D002833 2.6e-10 69.3 136 35.3
BraA06t27634Z Brassica rapa HOM05D004904 ORTHO05D002833 2.6e-10 69.3 136 35.3
CARHR147970 Cardamine hirsuta HOM05D008305 ORTHO05D002833 2.6e-10 69.3 135 37.0
Carub.0007s3747 Capsella rubella HOM05D003012 ORTHO05D002833 7.4e-10 67.8 143 35.0
THA.LOC104816681 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 7.4e-10 67.8 111 36.0
AT5G04347 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 1.7e-09 66.6 134 33.6
BcaNung05794 Brassica carinata HOM05D000149 ORTHO05D000076 4.8e-09 65.1 110 36.4
Aa31LG3G3090 Aethionema arabicum HOM05D004904 ORTHO05D002833 8.2e-09 64.3 135 31.9
Carub.0007s3551 Capsella rubella HOM05D008305 ORTHO05D010625 1.4e-08 63.5 136 33.8
Carub.0007s3746 Capsella rubella HOM05D003012 ORTHO05D002833 2.4e-08 62.8 136 36.8
BolC4t26548H Brassica oleracea HOM05D003012 ORTHO05D002833 3.1e-08 62.4 138 37.0
AT5G38440 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 4.1e-08 62.0 138 32.6
A07p19700 Brassica napus HOM05D003012 ORTHO05D002833 7.0e-08 61.2 131 32.8
C07p26380 Brassica napus HOM05D004904 ORTHO05D002833 7.0e-08 61.2 136 30.9
BolC7t43165H Brassica oleracea HOM05D004904 ORTHO05D002833 7.0e-08 61.2 136 30.9
Carub.0007s3550 Capsella rubella HOM05D008305 ORTHO05D010625 9.1e-08 60.8 117 35.9
BcaB06g27716 Brassica carinata HOM05D003012 ORTHO05D002833 1.2e-07 60.5 139 36.0
THA.LOC104816678 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 2.6e-07 59.3 133 32.3
AL5G17120 Arabidopsis lyrata HOM05D008305 ORTHO05D010625 3.4e-07 58.9 134 32.1
BcaB02g08008 Brassica carinata HOM05D003012 ORTHO05D002833 3.4e-07 58.9 137 33.6
BcaC08g44379 Brassica carinata HOM05D003012 ORTHO05D002833 3.4e-07 58.9 135 33.3
BolC6t37021H Brassica oleracea HOM05D003012 ORTHO05D002833 3.4e-07 58.9 135 33.3
BraA07t29670Z Brassica rapa HOM05D003012 ORTHO05D002833 3.4e-07 58.9 135 33.3
Carub.0007s3750 Capsella rubella HOM05D003012 ORTHO05D002833 3.4e-07 58.9 140 35.0
THA.LOC104816680 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 3.4e-07 58.9 135 33.3
Carub.0002s1683 Capsella rubella HOM05D004904 ORTHO05D012993 1.7e-06 56.6 135 28.9
Thhalv10002162m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 2.2e-06 56.2 142 32.4
C07p35950 Brassica napus HOM05D008305 ORTHO05D010625 3.8e-06 55.5 134 31.3
BolC7t44112H Brassica oleracea HOM05D008305 ORTHO05D010625 3.8e-06 55.5 134 31.3
Aa31LG2G5710 Aethionema arabicum HOM05D008305 ORTHO05D010625 5.0e-06 55.1 87 34.5
Carub.0003s3531 Capsella rubella HOM05D008344 ORTHO05D011034 5.0e-06 55.1 120 35.0
Aa31LG3G3080 Aethionema arabicum HOM05D004904 ORTHO05D002833 6.5e-06 54.7 131 32.8
Thhalv10009073m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 6.5e-06 54.7 137 30.7
AT1G28306 Arabidopsis thaliana HOM05D008305 ORTHO05D010625 8.5e-06 54.3 141 29.8
C05p59030 Brassica napus HOM05D003012 ORTHO05D002833 8.5e-06 54.3 136 30.1


User provided reference genes

Program Settings