Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 2.3e-119 432.2 209 100.0
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 2.9e-114 415.2 210 96.7
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 4.7e-104 381.3 184 98.9
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 7.4e-102 374.0 192 94.8
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 1.2e-99 366.7 192 93.2
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 4.4e-94 348.2 184 90.2
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 2.4e-92 342.4 185 88.1
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 1.9e-89 332.8 184 85.3
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 7.2e-89 330.9 185 85.9
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 8.0e-88 327.4 179 87.7
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 1.0e-87 327.0 184 85.9
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 1.0e-87 327.0 184 85.9
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 1.4e-87 326.6 184 84.8
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 2.0e-86 322.8 179 87.2
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 5.7e-86 321.2 184 83.2
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 5.7e-86 321.2 184 83.2
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 1.3e-85 320.1 184 83.2
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 1.0e-74 283.9 178 77.0
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 1.6e-67 260.0 173 70.5
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 5.6e-65 251.5 173 69.9
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 7.3e-65 251.1 175 67.4
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 9.5e-65 250.8 182 66.5
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 1.2e-64 250.4 167 70.7
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 1.2e-64 250.4 176 68.8
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 2.8e-64 249.2 167 70.1
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 2.8e-64 249.2 202 60.9
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 3.6e-64 248.8 179 65.4
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 3.6e-64 248.8 176 67.6
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 3.6e-64 248.8 177 66.7
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 8.0e-64 247.7 180 67.2
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 3.1e-63 245.7 177 67.2
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 4.0e-63 245.4 182 65.4
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 4.0e-63 245.4 176 66.5
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 4.0e-63 245.4 177 67.8
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 8.9e-63 244.2 173 68.2
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 8.9e-63 244.2 176 67.0
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 2.0e-62 243.0 176 67.0
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 2.6e-62 242.7 171 66.7
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 3.4e-62 242.3 159 69.8
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 7.5e-62 241.1 181 64.6
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 9.8e-62 240.7 167 67.1
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.3e-61 240.4 172 66.3
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 2.2e-61 239.6 157 69.4
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 2.9e-61 239.2 156 69.9
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 3.7e-61 238.8 157 70.1
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 3.7e-61 238.8 180 63.9
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 1.1e-60 237.3 152 73.0
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 1.4e-60 236.9 178 65.7
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.9e-60 236.5 170 64.7
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 2.4e-60 236.1 169 66.9
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 2.4e-60 236.1 173 65.9
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 3.2e-60 235.7 157 68.2
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 3.2e-60 235.7 158 70.9
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 4.1e-60 235.3 169 65.1
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 5.4e-60 235.0 158 68.4
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 7.0e-60 234.6 183 61.7
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 7.0e-60 234.6 156 68.6
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 7.0e-60 234.6 171 64.9
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 9.2e-60 234.2 169 66.3
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 9.2e-60 234.2 156 70.5
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 1.6e-59 233.4 180 62.8
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 2.1e-59 233.0 185 62.7
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 2.7e-59 232.6 169 65.7
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 3.5e-59 232.3 158 70.3
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 3.5e-59 232.3 158 67.7
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 7.8e-59 231.1 167 68.3
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 7.8e-59 231.1 172 63.4
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 1.0e-58 230.7 158 68.4
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 1.3e-58 230.3 191 58.6
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 2.3e-58 229.6 156 68.6
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 3.0e-58 229.2 154 68.8
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 5.1e-58 228.4 155 66.5
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 8.6e-58 227.6 180 60.0
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 1.5e-57 226.9 151 70.2
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 4.3e-57 225.3 157 66.9
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 5.6e-57 224.9 167 64.1
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 7.3e-57 224.6 174 62.6
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 4.7e-56 221.9 157 65.6
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 6.2e-56 221.5 156 64.7
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 2.6e-54 216.1 190 58.4
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 2.9e-53 212.6 156 66.0
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 1.4e-52 210.3 167 60.5
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 4.6e-51 205.3 239 48.5
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 6.0e-51 204.9 137 70.1
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 7.8e-51 204.5 137 69.3
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 3.3e-49 199.1 157 61.8
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 9.5e-49 197.6 141 68.1
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 2.8e-48 196.1 198 57.1
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 6.8e-47 191.4 156 61.5
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.9e-45 186.0 159 56.6
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 8.4e-45 184.5 189 52.4
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 2.4e-44 183.0 151 58.9
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.1e-43 179.9 159 57.2
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 6.0e-43 178.3 123 69.1
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 1.0e-42 177.6 138 64.5
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 2.3e-42 176.4 150 59.3
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 8.7e-42 174.5 156 56.4
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.3e-40 170.6 122 66.4
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 2.4e-39 166.4 118 66.1
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.3e-37 160.6 154 55.2
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 8.1e-32 141.4 117 59.8
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.7e-27 126.3 82 69.5
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 6.0e-27 125.2 80 77.5
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 1.1e-17 94.4 149 36.9
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 9.6e-17 91.3 89 49.4
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.4e-12 77.4 45 73.3
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 3.2e-12 76.3 78 53.8
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 3.3e-09 66.2 47 63.8
Sopen11g002570 Solanum pennellii HOM05D000011 ORTHO05D000018 4.5e-06 55.8 38 65.8
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 4.5e-06 55.8 41 61.0


User provided reference genes

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