Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p71580 Brassica napus HOM05D012504 ORTHO05D012796 6.1e-70 267.7 131 100.0
BolC9t59920H Brassica oleracea HOM05D012504 ORTHO05D012796 1.4e-66 256.5 131 96.9
BraA10t45179Z Brassica rapa HOM05D012504 ORTHO05D012796 1.9e-63 246.1 131 92.4
BcaC06g32221 Brassica carinata HOM05D012504 ORTHO05D012796 4.7e-38 161.8 140 65.7
C03p02470 Brassica napus HOM05D012504 ORTHO05D012796 2.8e-22 109.4 143 51.0
BolC3t12798H Brassica oleracea HOM05D012504 ORTHO05D012796 2.8e-22 109.4 143 51.0
Sp6g37720 Schrenkiella parvula HOM05D012504 ORTHO05D012796 2.4e-21 106.3 162 44.4
A03p02160 Brassica napus HOM05D012504 ORTHO05D012796 4.9e-19 98.6 130 46.9
BraA03t09580Z Brassica rapa HOM05D012504 ORTHO05D012796 6.4e-19 98.2 130 46.9
AL6G14950 Arabidopsis lyrata HOM05D012504 ORTHO05D012796 2.5e-15 86.3 132 41.7
AT5G05120 Arabidopsis thaliana HOM05D012504 ORTHO05D012796 1.4e-13 80.5 78 53.8
Thhalv10015305m.g Eutrema salsugineum HOM05D012504 ORTHO05D012796 2.0e-12 76.6 97 46.4
CARHR208150 Cardamine hirsuta HOM05D012504 ORTHO05D012796 4.5e-12 75.5 133 39.8
Carub.0006s0405 Capsella rubella HOM05D012504 ORTHO05D012796 3.5e-09 65.9 142 36.6
THA.LOC109117277 Tarenaya hassleriana HOM05D000333 ORTHO05D000627 1.0e-08 64.3 58 53.4
BcaB05g22350 Brassica carinata HOM05D000333 ORTHO05D000190 8.7e-08 61.2 82 37.8
A02p08460 Brassica napus HOM05D000333 ORTHO05D000190 1.5e-07 60.5 84 34.5
BraA02t05917Z Brassica rapa HOM05D000333 ORTHO05D000190 1.5e-07 60.5 84 34.5
AL675U10010 Arabidopsis lyrata HOM05D000333 ORTHO05D000190 1.9e-07 60.1 82 40.2
C02p14220 Brassica napus HOM05D000333 ORTHO05D000190 1.9e-07 60.1 82 35.4
FvH4_7g04251 Fragaria vesca HOM05D000333 ORTHO05D000190 4.3e-07 58.9 76 38.2
BcaC03g14151 Brassica carinata HOM05D000333 ORTHO05D000190 5.6e-07 58.5 82 35.4
BolC2t07544H Brassica oleracea HOM05D000333 ORTHO05D000190 5.6e-07 58.5 82 35.4
Phvul.005G014400 Phaseolus vulgaris HOM05D000333 ORTHO05D000190 5.6e-07 58.5 87 37.9
Phvul.005G014500 Phaseolus vulgaris HOM05D000333 ORTHO05D000190 5.6e-07 58.5 87 36.8
CSS0048728 Camellia sinensis var. sinensis HOM05D001250 ORTHO05D000627 9.6e-07 57.8 86 39.5
FAN02G4135 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN03G2930 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN04G0902 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN06G4863 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN10G0778 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN10G1402 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 89 36.0
FAN12G0373 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN16G0921 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN18G3909 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN21G0762 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN21G1166 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN23G1246 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN26G0350 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN27G0299 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
FAN28G2336 Fragaria x ananassa HOM05D000333 ORTHO05D000190 9.6e-07 57.8 76 36.8
EL10Ac2g02711 Beta vulgaris HOM05D000333 ORTHO05D000190 1.6e-06 57.0 79 41.8
Oeu060778.1 Olea europaea HOM05D030945 ORTHO05D036968 1.6e-06 57.0 87 36.8
CANSAT80G1583 Cannabis sativa HOM05D001250 ORTHO05D000627 2.1e-06 56.6 92 34.8
Sabra18G0105700 Salix brachista HOM05D000333 ORTHO05D000190 2.1e-06 56.6 81 37.0
Sp6g32520 Schrenkiella parvula HOM05D000333 ORTHO05D000190 2.1e-06 56.6 68 45.6
Dinv24910 Davidia involucrata HOM05D001250 ORTHO05D000627 2.8e-06 56.2 65 47.7
Lalb_Chr13g0300321 Lupinus albus HOM05D000333 ORTHO05D000190 2.8e-06 56.2 65 43.1
Oeu004188.1 Olea europaea HOM05D000333 ORTHO05D000190 2.8e-06 56.2 71 42.3
PSO063G0247 Papaver somniferum HOM05D000333 ORTHO05D000190 2.8e-06 56.2 99 39.4
Ciclev10032466m.g Citrus clementina HOM05D001250 ORTHO05D000627 3.7e-06 55.8 75 44.0
Glyma.04G127600 Glycine max HOM05D000333 ORTHO05D000190 3.7e-06 55.8 65 40.0
Potri.018G123800 Populus trichocarpa HOM05D000333 ORTHO05D000190 3.7e-06 55.8 76 38.2
BcaC01g06483 Brassica carinata HOM05D000333 ORTHO05D000190 4.8e-06 55.5 84 36.9
Dinv31990 Davidia involucrata HOM05D000840 ORTHO05D000670 4.8e-06 55.5 74 36.5
Thhalv10015251m.g Eutrema salsugineum HOM05D000333 ORTHO05D000190 4.8e-06 55.5 73 39.7
MD13G1269700 Malus domestica HOM05D000333 ORTHO05D000190 4.8e-06 55.5 79 34.2
Psat6g134440 Pisum sativum HOM05D010505 ORTHO05D012796 4.8e-06 55.5 66 37.9
SGA_v2.0_scaffold253G45160 Striga asiatica HOM05D000333 ORTHO05D000190 4.8e-06 55.5 72 43.1
Aa31LG3G16160 Aethionema arabicum HOM05D000333 ORTHO05D000190 6.2e-06 55.1 73 38.4
Duzib114G0860 Durio zibethinus HOM05D000333 ORTHO05D000190 6.2e-06 55.1 73 41.1
Oeu015334.1 Olea europaea HOM05D023726 ORTHO05D012796 6.2e-06 55.1 42 59.5
Oeu029000.1 Olea europaea HOM05D023726 ORTHO05D012796 6.2e-06 55.1 54 48.1
PSO724G1011 Papaver somniferum HOM05D000333 ORTHO05D000190 6.2e-06 55.1 103 35.0
AL6G21570 Arabidopsis lyrata HOM05D000333 ORTHO05D000190 8.1e-06 54.7 58 48.3
EL10Ac6g13753 Beta vulgaris HOM05D001250 ORTHO05D000627 8.1e-06 54.7 61 52.5
A02p39920 Brassica napus HOM05D000333 ORTHO05D000190 8.1e-06 54.7 101 34.7
A03p12750 Brassica napus HOM05D000333 ORTHO05D000190 8.1e-06 54.7 84 36.9
C03p14940 Brassica napus HOM05D000333 ORTHO05D000190 8.1e-06 54.7 84 36.9
BolC3t13936H Brassica oleracea HOM05D000333 ORTHO05D000190 8.1e-06 54.7 84 36.9
BraA02t08955Z Brassica rapa HOM05D000333 ORTHO05D000190 8.1e-06 54.7 101 34.7
BraA03t10586Z Brassica rapa HOM05D000333 ORTHO05D000190 8.1e-06 54.7 84 36.9
CARHR202320 Cardamine hirsuta HOM05D000333 ORTHO05D000190 8.1e-06 54.7 72 43.1
CiPaw.09G051500 Carya illinoinensis HOM05D000333 ORTHO05D000190 8.1e-06 54.7 71 45.1
AUR62012460 Chenopodium quinoa HOM05D000333 ORTHO05D000190 8.1e-06 54.7 109 34.9
Lj9C648T16 Lonicera japonica HOM05D000333 ORTHO05D000190 8.1e-06 54.7 83 38.6
Manes.01G111600 Manihot esculenta HOM05D001250 ORTHO05D000627 8.1e-06 54.7 68 50.0
Nn7g36999 Nelumbo nucifera HOM05D000333 ORTHO05D000190 8.1e-06 54.7 76 35.5
Phvul.001G046500 Phaseolus vulgaris HOM05D000333 ORTHO05D000190 8.1e-06 54.7 66 42.4
Potri.004G097900 Populus trichocarpa HOM05D001250 ORTHO05D000627 8.1e-06 54.7 63 46.0


User provided reference genes

Program Settings