Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 2.8e-166 588.6 307 100.0
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 3.1e-165 585.1 307 99.3
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 2.0e-156 555.8 308 94.8
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 7.2e-154 547.4 308 93.5
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 9.5e-130 467.2 327 76.5
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.1e-122 443.7 322 73.6
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 7.3e-122 441.0 321 73.5
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 8.9e-120 434.1 321 72.6
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 4.4e-119 431.8 324 72.2
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 2.2e-118 429.5 321 73.8
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 4.9e-110 401.7 324 68.2
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.1e-96 357.5 321 63.9
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 8.4e-94 347.8 323 58.5
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 4.3e-74 282.3 324 48.8
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 9.6e-74 281.2 332 49.1
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 1.4e-72 277.3 306 49.0
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 4.1e-72 275.8 313 52.1
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 5.3e-72 275.4 323 49.2
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 6.9e-72 275.0 313 50.2
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.5e-71 272.3 313 50.5
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 7.6e-71 271.6 313 50.5
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 1.3e-70 270.8 305 49.8
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.1e-69 267.7 323 50.2
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 3.6e-68 262.7 324 49.1
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 6.1e-68 261.9 315 49.2
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 3.0e-67 259.6 305 47.9
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 1.5e-66 257.3 331 46.8
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 1.9e-66 256.9 374 42.0
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 4.3e-66 255.8 325 46.5
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 4.8e-65 252.3 322 45.0
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 8.2e-65 251.5 319 46.1
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 8.2e-65 251.5 316 46.2
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 1.1e-64 251.1 318 45.9
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 2.4e-64 250.0 317 45.7
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 5.3e-64 248.8 324 46.9
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 6.9e-64 248.4 328 45.7
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 1.3e-62 244.2 322 46.3
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 1.3e-62 244.2 344 43.6
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 2.9e-62 243.0 334 48.2
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 2.9e-62 243.0 327 44.6
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 1.4e-61 240.7 326 44.8
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 4.2e-61 239.2 334 47.3
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 1.2e-60 237.7 306 44.1
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 2.1e-60 236.9 307 45.9
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 2.1e-60 236.9 369 40.1
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 9.7e-58 228.0 317 43.8
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 9.7e-58 228.0 310 44.5
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 1.3e-57 227.6 388 41.8
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 1.3e-57 227.6 310 44.5
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 3.7e-57 226.1 335 42.7
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 4.8e-57 225.7 314 43.0
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 1.4e-56 224.2 318 44.3
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 1.8e-56 223.8 309 45.0
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 2.4e-56 223.4 313 43.5
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 1.2e-55 221.1 310 41.3
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 2.6e-55 219.9 321 44.2
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 2.6e-55 219.9 340 40.6
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 4.5e-55 219.2 311 44.7
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 5.9e-55 218.8 285 46.0
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 2.2e-54 216.9 317 40.7
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 3.8e-54 216.1 312 42.9
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 8.5e-54 214.9 268 47.4
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 6.1e-52 208.8 257 48.6
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 6.7e-51 205.3 357 38.7
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 6.7e-51 205.3 268 45.1
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 1.1e-50 204.5 309 42.7
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 5.7e-50 202.2 261 47.9
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 5.7e-50 202.2 311 41.2
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 1.7e-49 200.7 317 41.0
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 5.3e-48 195.7 306 39.2
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 1.6e-47 194.1 305 39.7
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 2.6e-47 193.4 313 39.3
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 7.7e-47 191.8 305 38.7
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 1.3e-46 191.0 284 42.3
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 3.8e-46 189.5 249 44.2
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 6.5e-46 188.7 280 44.3
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 1.9e-45 187.2 305 39.3
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 2.5e-45 186.8 290 39.0
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 3.2e-45 186.4 260 46.2
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 3.6e-44 183.0 175 53.1
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 6.1e-44 182.2 164 57.3
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 1.0e-43 181.4 244 46.3
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 6.7e-43 178.7 266 42.1
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 9.7e-42 174.9 182 54.4
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 1.3e-41 174.5 305 38.4
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 2.4e-40 170.2 160 53.8
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 3.1e-40 169.9 276 38.4
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 4.5e-39 166.0 310 39.4
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 8.3e-33 145.2 165 52.1
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 2.7e-31 140.2 360 30.8
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 5.9e-31 139.0 234 41.9
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 2.8e-28 130.2 97 58.8
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 8.0e-28 128.6 183 41.5
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 5.2e-27 125.9 92 64.1
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.5e-23 113.2 84 65.5
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 8.6e-22 108.6 254 31.9
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 6.8e-19 99.0 340 27.4
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.2e-17 94.0 165 41.2
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 2.7e-15 87.0 402 24.9
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.9e-14 83.2 73 56.2
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 1.0e-11 75.1 114 41.2
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 1.5e-10 71.2 108 36.1
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.4e-10 70.1 121 39.7
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.7e-09 67.8 65 49.2
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 2.9e-09 67.0 87 44.8
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 2.9e-09 67.0 65 50.8
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 6.4e-09 65.9 66 54.5
AL5G44100 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.1e-08 65.1 73 56.2
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 1.9e-08 64.3 53 64.2
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 5.4e-08 62.8 47 59.6
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 1.2e-07 61.6 119 31.9
MD12G1047700 Malus domestica HOM05D007071 ORTHO05D008677 1.6e-07 61.2 45 57.8
Cre08.g359800 Chlamydomonas reinhardtii HOM05D007071 ORTHO05D008677 3.9e-06 56.6 114 26.3
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 6.6e-06 55.8 58 50.0


User provided reference genes

Program Settings