Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 8.3e-278 959.9 545 100.0
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.4e-277 958.4 545 99.8
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.4e-277 958.4 545 99.8
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 2.6e-271 938.3 545 97.8
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 2.6e-271 938.3 545 97.8
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 5.6e-266 920.6 550 89.6
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 2.1e-257 892.1 553 87.0
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 5.1e-251 870.9 553 84.3
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 6.6e-251 870.5 553 84.4
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.2e-247 859.8 550 83.5
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.0e-247 859.0 550 82.9
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 2.0e-247 859.0 550 83.1
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.7e-238 829.3 548 81.6
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.3e-219 765.8 563 73.7
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 4.1e-192 675.2 565 65.3
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 4.1e-192 675.2 571 63.7
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.2e-191 673.7 571 65.8
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.5e-191 673.3 566 65.2
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 3.4e-191 672.2 565 64.8
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 4.5e-191 671.8 566 65.0
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 8.5e-190 667.5 561 64.7
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 8.5e-190 667.5 571 65.0
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 1.6e-188 663.3 555 64.3
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 5.2e-187 658.3 571 62.5
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 6.7e-187 657.9 557 63.6
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.5e-186 656.8 571 63.7
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 2.6e-186 656.0 555 64.1
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 3.3e-186 655.6 562 63.7
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 7.4e-186 654.4 571 63.2
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 7.4e-186 654.4 555 64.7
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 9.7e-186 654.1 567 63.8
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 9.7e-186 654.1 557 63.9
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.2e-185 652.9 557 63.7
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 3.7e-185 652.1 558 62.7
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.8e-184 649.8 573 62.8
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.8e-184 649.8 576 61.6
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 2.4e-184 649.4 570 63.3
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 9.1e-184 647.5 557 63.2
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 9.1e-184 647.5 570 62.6
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 4.5e-183 645.2 567 61.9
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.3e-182 643.7 562 63.0
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 2.2e-182 642.9 566 61.8
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 6.5e-182 641.3 560 62.9
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 6.5e-182 641.3 563 62.7
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 2.5e-181 639.4 560 62.3
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.5e-181 639.4 549 63.0
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 2.5e-181 639.4 556 63.3
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 4.2e-181 638.6 571 61.6
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 7.2e-181 637.9 565 63.5
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 3.6e-180 635.6 558 63.1
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 6.1e-180 634.8 557 62.3
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.8e-179 633.3 561 62.6
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 3.0e-179 632.5 587 60.3
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 4.0e-179 632.1 564 60.8
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 5.2e-179 631.7 564 60.5
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 6.7e-179 631.3 546 62.5
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.5e-178 630.2 550 62.2
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 2.6e-178 629.4 561 61.5
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 3.3e-178 629.0 565 60.2
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 5.7e-178 628.2 565 60.0
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.3e-177 627.1 569 60.6
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.7e-177 626.7 560 60.5
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 3.7e-177 625.5 573 61.1
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 8.2e-177 624.4 563 60.2
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.1e-176 624.0 574 58.9
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.8e-176 623.2 553 62.6
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 9.1e-176 620.9 559 61.2
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.2e-175 620.5 558 61.8
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.2e-175 620.5 580 58.6
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 1.6e-175 620.2 563 60.0
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 2.0e-175 619.8 565 59.5
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 2.7e-175 619.4 556 61.2
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.0e-174 617.5 569 58.5
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 2.2e-174 616.3 558 60.8
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 6.5e-174 614.8 595 58.2
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 8.5e-174 614.4 630 55.4
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 8.5e-174 614.4 552 61.4
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.9e-173 613.2 561 60.8
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 7.2e-173 611.3 583 58.3
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.4e-171 607.1 572 59.1
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 3.7e-169 599.0 573 58.8
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 4.1e-168 595.5 567 59.1
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 3.6e-164 582.4 555 56.8
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 2.9e-158 562.8 569 55.2
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.3e-157 559.3 523 58.7
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 5.6e-157 558.5 568 56.7
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 4.4e-154 548.9 529 59.5
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 1.3e-153 547.4 576 51.2
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.9e-153 546.2 559 55.6
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 4.9e-153 545.4 556 55.9
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.6e-151 540.4 562 52.7
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 4.6e-151 538.9 633 50.2
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 7.5e-146 521.5 475 60.2
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 5.0e-142 508.8 507 56.4
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 9.9e-138 494.6 478 56.5
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 3.8e-129 466.1 399 63.9
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.2e-114 417.9 572 43.7
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 2.2e-113 413.7 551 42.6
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 5.1e-110 402.5 448 54.2
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 6.2e-100 369.0 575 43.8
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 1.6e-95 354.4 542 40.0
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 3.3e-93 346.7 224 74.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 9.7e-93 345.1 237 72.6
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 8.2e-92 342.0 397 52.6
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.9e-88 330.9 587 36.5
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 8.8e-70 268.9 291 55.0
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 4.4e-69 266.5 215 68.8
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 6.3e-68 262.7 238 56.7
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 3.5e-66 256.9 264 53.0
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 6.5e-65 252.7 307 52.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 1.7e-52 211.5 152 73.7
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 2.0e-50 204.5 376 41.8
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.7e-44 184.9 578 26.1
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.4e-43 181.0 193 52.8
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 8.6e-33 146.0 149 56.4
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 3.6e-31 140.6 157 55.4
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.7e-26 124.4 71 78.9
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 3.2e-11 74.3 54 72.2
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 1.8e-06 58.5 40 67.5


User provided reference genes

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