Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32425 Brassica carinata HOM05D021341 ORTHO05D024077 1.1e-64 251.5 425 100.0
C09p69660 Brassica napus HOM05D021341 ORTHO05D024077 1.1e-64 251.5 425 100.0
BolC9t59709H Brassica oleracea HOM05D021341 ORTHO05D024077 1.1e-64 251.5 425 100.0
BraA10t44973Z Brassica rapa HOM05D021341 ORTHO05D024077 1.1e-35 155.2 167 90.4
A10p29270 Brassica napus HOM05D021341 ORTHO05D024077 2.5e-35 154.1 441 72.1
BcaC06g32488 Brassica carinata HOM05D021341 ORTHO05D093304 1.3e-28 131.7 164 73.2
C03p03790 Brassica napus HOM05D007846 ORTHO05D010837 2.9e-12 77.4 138 45.7
A03p03350 Brassica napus HOM05D007846 ORTHO05D010837 3.8e-12 77.0 138 45.7
BcaB01g06046 Brassica carinata HOM05D007846 ORTHO05D010837 1.6e-10 71.6 74 59.5
BolC3t12914H Brassica oleracea HOM05D007846 ORTHO05D010837 1.6e-10 71.6 74 59.5
BcaB01g06047 Brassica carinata HOM05D007846 ORTHO05D010837 2.1e-10 71.2 93 55.9
BcaB01g05692 Brassica carinata HOM05D007846 ORTHO05D010837 4.0e-09 67.0 73 56.2
BcaB01g06048 Brassica carinata HOM05D007846 ORTHO05D010837 5.2e-09 66.6 48 79.2
Sp6g35340 Schrenkiella parvula HOM05D007846 ORTHO05D371621 5.7e-08 63.2 81 49.4
AL6G17840 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 3.7e-07 60.5 45 75.6
BcaC06g32486 Brassica carinata HOM05D007846 ORTHO05D010837 4.8e-07 60.1 69 55.1
BcaB05g21610 Brassica carinata HOM05D007846 ORTHO05D010837 8.3e-07 59.3 83 42.2
A10p29250 Brassica napus HOM05D007846 ORTHO05D010837 8.3e-07 59.3 68 57.4
BraA10t44971Z Brassica rapa HOM05D007846 ORTHO05D010837 8.3e-07 59.3 68 57.4
Thhalv10015090m.g Eutrema salsugineum HOM05D007846 ORTHO05D000624 8.3e-07 59.3 42 78.6
Aa31LG3G18890 Aethionema arabicum HOM05D007846 ORTHO05D010837 1.4e-06 58.5 74 48.6
Carub.0006s0651 Capsella rubella HOM05D007846 ORTHO05D010837 1.4e-06 58.5 74 50.0
Sp6g35350 Schrenkiella parvula HOM05D007846 ORTHO05D010837 3.1e-06 57.4 46 71.7
BcaC06g32428 Brassica carinata HOM05D007846 ORTHO05D010837 4.1e-06 57.0 68 54.4
A03p03340 Brassica napus HOM05D007846 ORTHO05D010837 4.1e-06 57.0 74 51.4
C09p69640 Brassica napus HOM05D007846 ORTHO05D010837 4.1e-06 57.0 68 54.4
C09p69650 Brassica napus HOM05D007846 ORTHO05D010837 4.1e-06 57.0 46 73.9
BolC9t59707H Brassica oleracea HOM05D007846 ORTHO05D010837 4.1e-06 57.0 68 54.4
BolC9t59708H Brassica oleracea HOM05D007846 ORTHO05D010837 4.1e-06 57.0 46 73.9
BraA03t09686Z Brassica rapa HOM05D007846 ORTHO05D010837 4.1e-06 57.0 74 51.4
BcaC06g32487 Brassica carinata HOM05D007846 ORTHO05D010837 5.3e-06 56.6 46 71.7
BraA02t04921Z Brassica rapa HOM05D007846 ORTHO05D010837 5.3e-06 56.6 72 54.2
Sp6g35320 Schrenkiella parvula HOM05D000805 ORTHO05D000624 5.3e-06 56.6 55 63.6
C08p18270 Brassica napus HOM05D007846 ORTHO05D010837 7.0e-06 56.2 71 52.1
BolC8t49462H Brassica oleracea HOM05D007846 ORTHO05D010837 7.0e-06 56.2 71 52.1
BraA08t34994Z Brassica rapa HOM05D007846 ORTHO05D010837 7.0e-06 56.2 71 52.1
Carub.0006s0653 Capsella rubella HOM05D007846 ORTHO05D000624 7.0e-06 56.2 40 72.5
Thhalv10015089m.g Eutrema salsugineum HOM05D000805 ORTHO05D000624 7.0e-06 56.2 53 64.2
BcaC06g32423 Brassica carinata HOM05D007846 ORTHO05D023961 9.1e-06 55.8 42 71.4
A10p29310 Brassica napus HOM05D007846 ORTHO05D023961 9.1e-06 55.8 42 71.4
C09p69680 Brassica napus HOM05D007846 ORTHO05D023961 9.1e-06 55.8 42 71.4
BolC9t59711H Brassica oleracea HOM05D007846 ORTHO05D023961 9.1e-06 55.8 42 71.4
BraA10t44975Z Brassica rapa HOM05D007846 ORTHO05D023961 9.1e-06 55.8 42 71.4


User provided reference genes

Program Settings