Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p68210 Brassica napus HOM05D008049 ORTHO05D010198 1.6e-158 562.8 298 100.0
BolC9t59570H Brassica oleracea HOM05D008049 ORTHO05D010198 6.8e-157 557.4 298 99.3
BraA10t44851Z Brassica rapa HOM05D008049 ORTHO05D010198 5.7e-148 527.7 299 95.3
A10p28010 Brassica napus HOM05D008049 ORTHO05D010198 2.2e-147 525.8 299 95.3
Sp6g34110 Schrenkiella parvula HOM05D008049 ORTHO05D010198 6.2e-126 454.5 312 84.9
Thhalv10014201m.g Eutrema salsugineum HOM05D008049 ORTHO05D010198 9.2e-122 440.7 312 82.1
BcaB08g37227 Brassica carinata HOM05D008049 ORTHO05D010198 2.8e-118 429.1 313 80.8
CARHR204240 Cardamine hirsuta HOM05D008049 ORTHO05D010198 1.1e-114 417.2 306 81.7
AL6G19520 Arabidopsis lyrata HOM05D008049 ORTHO05D010198 4.6e-113 411.8 305 80.7
AT5G08770 Arabidopsis thaliana HOM05D008049 ORTHO05D010198 3.0e-112 409.1 305 80.3
Aa31LG3G17800 Aethionema arabicum HOM05D008049 ORTHO05D010198 5.1e-112 408.3 305 78.4
Carub.0006s0774 Capsella rubella HOM05D008049 ORTHO05D010198 1.3e-110 403.7 312 77.6
THA.LOC104818414 Tarenaya hassleriana HOM05D008049 ORTHO05D010198 3.7e-86 322.4 309 65.0
Cpa.g.sc37.30 Carica papaya HOM05D008049 ORTHO05D010198 1.8e-77 293.5 309 57.3
Ciclev10002216m.g Citrus clementina HOM05D008049 ORTHO05D010198 3.8e-67 259.2 302 55.3
Atru.chr4.1095 Acer truncatum HOM05D008049 ORTHO05D010198 1.1e-66 257.7 305 54.1
Atru.chr4.1100 Acer truncatum HOM05D008049 ORTHO05D010198 1.1e-66 257.7 305 54.1
CiPaw.03G116500 Carya illinoinensis HOM05D008049 ORTHO05D010198 5.5e-66 255.4 315 52.1
Dinv30334 Davidia involucrata HOM05D008049 ORTHO05D010198 7.9e-65 251.5 332 50.9
Potri.005G069900 Populus trichocarpa HOM05D008049 ORTHO05D010198 2.0e-63 246.9 312 51.3
QL10p040433 Quercus lobata HOM05D008049 ORTHO05D010198 1.4e-61 240.7 322 48.4
Prupe.4G279900 Prunus persica HOM05D008049 ORTHO05D010198 2.4e-61 240.0 312 50.0
TWI31G1063 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 3.1e-61 239.6 315 50.2
MD15G1137300 Malus domestica HOM05D008049 ORTHO05D010198 4.1e-61 239.2 310 50.0
PGR102G0265 Punica granatum HOM05D008049 ORTHO05D010198 3.5e-60 236.1 308 50.3
Hma1.2p1_0134F.1_g061550 Hydrangea macrophylla HOM05D008049 ORTHO05D010198 2.2e-59 233.4 319 48.0
FAN26G0656 Fragaria x ananassa HOM05D008049 ORTHO05D010198 6.5e-59 231.9 303 48.8
FAN26G2415 Fragaria x ananassa HOM05D008049 ORTHO05D010198 6.5e-59 231.9 303 48.8
Thecc.01G140900 Theobroma cacao HOM05D008049 ORTHO05D010198 3.2e-58 229.6 260 53.1
TWI79G0517 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 4.2e-58 229.2 315 48.9
PSO528G0188 Papaver somniferum HOM05D008049 ORTHO05D010198 7.2e-58 228.4 269 52.0
RcHm_v2.0_Chr2g0123171 Rosa chinensis HOM05D008049 ORTHO05D010198 2.1e-57 226.9 307 49.2
FvH4_1g25250 Fragaria vesca HOM05D008049 ORTHO05D010198 2.7e-57 226.5 300 48.3
TAR381G0470 Trochodendron aralioides HOM05D008049 ORTHO05D010198 8.8e-56 221.5 318 48.1
Duzib187G0110 Durio zibethinus HOM05D008049 ORTHO05D010198 2.6e-55 219.9 310 48.7
Duzib147G0405 Durio zibethinus HOM05D008049 ORTHO05D010198 7.5e-55 218.4 307 47.9
Gorai.012G037400 Gossypium raimondii HOM05D008049 ORTHO05D010198 1.7e-54 217.2 261 53.6
Medtr3g096940 Medicago truncatula HOM05D008049 ORTHO05D010198 1.7e-54 217.2 304 48.0
FAN19G2909 Fragaria x ananassa HOM05D008049 ORTHO05D010198 2.2e-54 216.9 293 47.8
Actinidia16520 Actinidia chinensis HOM05D008049 ORTHO05D010198 8.2e-54 214.9 254 51.2
PSO170G0957 Papaver somniferum HOM05D008049 ORTHO05D010198 6.5e-51 205.3 246 52.0
arahy.Tifrunner.gnm1.ann1.M4SWJY Arachis hypogaea HOM05D008049 ORTHO05D010198 8.5e-51 204.9 322 46.0
arahy.Tifrunner.gnm1.ann1.WZNZ1Z Arachis hypogaea HOM05D008049 ORTHO05D010198 2.5e-50 203.4 324 45.7
Glyma.04G208100 Glycine max HOM05D008049 ORTHO05D010198 2.5e-50 203.4 305 46.6
Lj1g0009929 Lotus japonicus HOM05D008049 ORTHO05D010198 3.2e-50 203.0 320 44.4
Sc09g0002140 Simmondsia chinensis HOM05D008049 ORTHO05D010198 9.4e-50 201.4 271 48.3
DCAR_013179 Daucus carota HOM05D008049 ORTHO05D010198 1.2e-49 201.1 310 41.3
Phvul.009G152600 Phaseolus vulgaris HOM05D008049 ORTHO05D010198 1.6e-49 200.7 309 45.0
Glyma.06G157600 Glycine max HOM05D008049 ORTHO05D010198 1.5e-47 194.1 299 45.5
Nn5g28352 Nelumbo nucifera HOM05D008049 ORTHO05D010198 1.1e-45 188.0 309 44.7
VMungo1309G0538 Vigna mungo HOM05D008049 ORTHO05D010198 1.0e-43 181.4 303 42.9
COL.COLO4_12107 Corchorus olitorius HOM05D008049 ORTHO05D010198 1.3e-43 181.0 163 62.6
Lalb_Chr08g0238031 Lupinus albus HOM05D008049 ORTHO05D010198 4.2e-42 176.0 234 50.4
Migut.H00830 Erythranthe guttata HOM05D008049 ORTHO05D010198 1.2e-41 174.5 313 41.9
EL10Ac4g09675 Beta vulgaris HOM05D008049 ORTHO05D010198 7.0e-37 158.7 264 44.7
unitig_899.g15147 Utricularia gibba HOM05D008049 ORTHO05D010198 3.3e-34 149.8 218 48.2
AUR62006889 Chenopodium quinoa HOM05D008049 ORTHO05D010198 1.2e-31 141.4 170 53.5
Gohir.D04G033000 Gossypium hirsutum HOM05D008049 ORTHO05D010198 1.2e-31 141.4 261 39.1
Gohir.A05G382200 Gossypium hirsutum HOM05D008049 ORTHO05D010198 5.7e-31 139.0 261 38.7
Sabra05G0056900 Salix brachista HOM05D008049 ORTHO05D010198 2.7e-28 130.2 112 59.8
MD15G1137000 Malus domestica HOM05D008049 ORTHO05D010198 5.0e-27 125.9 153 52.3
CDE04G3132 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 1.7e-22 110.9 289 32.5
CDE07G0304 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 1.3e-19 101.3 281 32.0
Psat5g058560 Pisum sativum HOM05D008049 ORTHO05D010198 3.9e-19 99.8 91 60.4
Nitab4.5_0000905g0120 Nicotiana tabacum HOM05D008049 ORTHO05D010198 7.3e-18 95.5 177 40.1
AUR62000540 Chenopodium quinoa HOM05D008049 ORTHO05D010198 4.7e-17 92.8 94 54.3
TPR.G7867 Trifolium pratense HOM05D008049 ORTHO05D010198 1.2e-15 88.2 180 40.6
MBI06_g26010_MAGBIO Magnolia biondii HOM05D008049 ORTHO05D010198 6.0e-12 75.9 169 36.7
SGA_v2.0_scaffold20G08957 Striga asiatica HOM05D008049 ORTHO05D010198 1.3e-11 74.7 106 43.4
Ca_16998_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 7.3e-10 68.9 62 61.3
Ca_17026_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 7.3e-10 68.9 62 61.3
arahy.Tifrunner.gnm1.ann1.P087XE Arachis hypogaea HOM05D008049 ORTHO05D010198 4.4e-07 59.7 40 70.0


User provided reference genes

Program Settings