Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 2.1e-83 312.4 164 100.0
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 4.7e-75 284.6 164 95.1
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 4.7e-75 284.6 164 95.1
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 4.7e-75 284.6 164 95.1
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 2.3e-66 255.8 157 89.8
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 8.5e-61 237.3 157 85.4
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 1.1e-47 193.7 109 92.7
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 3.1e-47 192.2 105 95.2
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 5.4e-47 191.4 110 92.7
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 5.4e-47 191.4 107 93.5
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 9.2e-47 190.7 105 94.3
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 3.5e-46 188.7 107 90.7
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 1.3e-45 186.8 107 90.7
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 2.9e-45 185.7 105 91.4
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 5.0e-45 184.9 107 88.8
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 8.6e-45 184.1 105 91.4
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 1.2e-43 180.3 106 91.5
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 1.2e-43 180.3 106 91.5
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 1.4e-42 176.8 106 85.8
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 2.3e-34 149.4 107 72.9
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 6.4e-32 141.4 102 72.5
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 7.5e-25 117.9 119 53.8
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 1.9e-23 113.2 89 60.7
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 4.1e-23 112.1 102 52.9
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 5.4e-23 111.7 116 52.6
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 9.2e-23 110.9 110 52.7
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 9.2e-23 110.9 103 56.3
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 2.1e-22 109.8 89 61.8
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 2.7e-22 109.4 92 59.8
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 2.7e-22 109.4 85 60.0
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 3.5e-22 109.0 95 57.9
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 4.6e-22 108.6 95 53.7
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 6.0e-22 108.2 91 57.1
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 7.8e-22 107.8 104 53.8
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.0e-21 107.5 88 56.8
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 1.0e-21 107.5 103 50.5
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 1.0e-21 107.5 83 61.4
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.3e-21 107.1 109 53.2
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 1.7e-21 106.7 91 56.0
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.7e-21 106.7 91 56.0
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 1.7e-21 106.7 83 61.4
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 2.3e-21 106.3 85 61.2
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 3.0e-21 105.9 84 60.7
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 3.0e-21 105.9 84 60.7
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 3.0e-21 105.9 84 60.7
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 3.0e-21 105.9 83 60.2
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 3.9e-21 105.5 85 60.0
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 3.9e-21 105.5 103 54.4
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 5.1e-21 105.1 83 60.2
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 5.1e-21 105.1 120 49.2
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 6.6e-21 104.8 97 56.7
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 6.6e-21 104.8 81 63.0
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 6.6e-21 104.8 103 55.3
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 8.6e-21 104.4 103 51.5
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 8.6e-21 104.4 96 55.2
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.1e-20 104.0 96 56.2
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 1.1e-20 104.0 83 59.0
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 1.5e-20 103.6 132 44.7
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 1.5e-20 103.6 96 55.2
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.5e-20 103.6 100 53.0
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 1.9e-20 103.2 95 52.6
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 2.5e-20 102.8 107 53.3
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.5e-20 102.8 133 44.4
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 2.5e-20 102.8 92 56.5
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 2.5e-20 102.8 87 54.0
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 3.3e-20 102.4 92 56.5
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 4.3e-20 102.1 84 57.1
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 4.3e-20 102.1 89 58.4
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 4.3e-20 102.1 101 53.5
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 5.6e-20 101.7 89 57.3
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 5.6e-20 101.7 99 52.5
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 5.6e-20 101.7 101 53.5
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 7.3e-20 101.3 85 57.6
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 9.5e-20 100.9 101 53.5
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.2e-19 100.5 97 53.6
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.6e-19 100.1 97 51.5
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.6e-19 100.1 102 54.9
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 1.6e-19 100.1 82 56.1
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 2.8e-19 99.4 84 59.5
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 2.8e-19 99.4 84 54.8
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 3.6e-19 99.0 84 58.3
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 4.7e-19 98.6 137 44.5
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 8.1e-19 97.8 85 57.6
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 8.1e-19 97.8 99 50.5
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 8.1e-19 97.8 101 52.5
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 8.1e-19 97.8 78 60.3
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 1.1e-18 97.4 101 47.5
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 1.1e-18 97.4 99 50.5
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 1.8e-18 96.7 66 62.1
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 2.4e-18 96.3 85 55.3
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 2.4e-18 96.3 72 63.9
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 3.1e-18 95.9 74 58.1
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 3.1e-18 95.9 74 58.1
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 4.0e-18 95.5 86 54.7
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 5.2e-18 95.1 100 51.0
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 5.2e-18 95.1 102 51.0
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 6.8e-18 94.7 84 56.0
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 8.9e-18 94.4 102 52.0
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 8.9e-18 94.4 107 48.6
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 1.2e-17 94.0 106 47.2
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.5e-17 93.6 78 56.4
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.5e-17 93.6 84 56.0
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 1.5e-17 93.6 101 49.5
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 2.0e-17 93.2 84 54.8
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 2.6e-17 92.8 105 49.5
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 5.8e-17 91.7 97 51.5
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 5.8e-17 91.7 87 52.9
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 7.6e-17 91.3 84 56.0
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 7.6e-17 91.3 84 53.6
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 9.9e-17 90.9 104 45.2
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.7e-16 90.1 84 53.6
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.2e-16 89.7 62 64.5
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 6.4e-16 88.2 83 54.2
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 6.4e-16 88.2 91 52.7
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.1e-15 87.4 84 52.4
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 1.1e-15 87.4 62 61.3
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 2.4e-15 86.3 63 61.9
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.4e-15 86.3 71 56.3
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.2e-14 84.0 61 59.0
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 3.9e-13 79.0 98 46.9
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 8.7e-13 77.8 63 55.6
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 5.6e-12 75.1 47 59.6
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 1.6e-11 73.6 84 41.7
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 3.4e-09 65.9 106 34.9
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 7.6e-09 64.7 92 37.0
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 3.8e-08 62.4 37 64.9


User provided reference genes

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