Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p67190 Brassica napus HOM05D000391 ORTHO05D000293 1.4e-23 112.1 57 100.0
BcaB08g37127 Brassica carinata HOM05D000391 ORTHO05D000293 6.7e-13 76.6 38 97.4
BcaB08g37130 Brassica carinata HOM05D000391 ORTHO05D000293 6.7e-13 76.6 38 97.4
A10p27330 Brassica napus HOM05D000391 ORTHO05D000293 6.7e-13 76.6 38 97.4
BraA10t44784Z Brassica rapa HOM05D000391 ORTHO05D000293 6.7e-13 76.6 38 97.4
AL6G20720 Arabidopsis lyrata HOM05D000391 ORTHO05D000293 1.1e-12 75.9 38 94.7
Carub.0006s0869 Capsella rubella HOM05D000391 ORTHO05D000293 1.1e-12 75.9 38 94.7
Thhalv10014138m.g Eutrema salsugineum HOM05D000391 ORTHO05D000293 1.1e-12 75.9 38 94.7
SpUN1172_0010 Schrenkiella parvula HOM05D000391 ORTHO05D000293 1.1e-12 75.9 38 94.7
BolC9t59490H Brassica oleracea HOM05D000391 ORTHO05D000293 1.5e-12 75.5 38 94.7
AT5G10230 Arabidopsis thaliana HOM05D000391 ORTHO05D000293 1.9e-12 75.1 38 92.1
THA.LOC104804925 Tarenaya hassleriana HOM05D000391 ORTHO05D000293 1.7e-11 72.0 38 92.1
CARHR203070 Cardamine hirsuta HOM05D000391 ORTHO05D000293 8.2e-11 69.7 38 86.8
Sp6g33180 Schrenkiella parvula HOM05D000391 ORTHO05D000293 1.1e-10 69.3 38 84.2
Aa31LG3G16920 Aethionema arabicum HOM05D000391 ORTHO05D000293 3.1e-10 67.8 38 78.9
BcaC04g19321 Brassica carinata HOM05D000391 ORTHO05D000293 3.1e-10 67.8 38 84.2
A10p27340 Brassica napus HOM05D000391 ORTHO05D000293 3.1e-10 67.8 38 84.2
C09p67200 Brassica napus HOM05D000391 ORTHO05D000293 3.1e-10 67.8 38 84.2
BolC9t59491H Brassica oleracea HOM05D000391 ORTHO05D000293 3.1e-10 67.8 38 84.2
BraA10t44785Z Brassica rapa HOM05D000391 ORTHO05D000293 3.1e-10 67.8 38 84.2
Thhalv10014136m.g Eutrema salsugineum HOM05D000391 ORTHO05D000293 3.1e-10 67.8 38 84.2
AL8G42530 Arabidopsis lyrata HOM05D000391 ORTHO05D000293 4.1e-10 67.4 38 81.6
AT5G65020 Arabidopsis thaliana HOM05D000391 ORTHO05D000293 4.1e-10 67.4 38 81.6
BcaB02g09855 Brassica carinata HOM05D000391 ORTHO05D000293 4.1e-10 67.4 38 81.6
BcaC01g02733 Brassica carinata HOM05D000391 ORTHO05D000293 4.1e-10 67.4 38 81.6
A06p31840 Brassica napus HOM05D000391 ORTHO05D000293 4.1e-10 67.4 38 81.6
C03p61170 Brassica napus HOM05D000391 ORTHO05D000293 4.1e-10 67.4 38 81.6
BolC3t18377H Brassica oleracea HOM05D000391 ORTHO05D000293 4.1e-10 67.4 38 81.6
BraA06t26117Z Brassica rapa HOM05D000391 ORTHO05D000293 4.1e-10 67.4 38 81.6
Carub.0008s2586 Capsella rubella HOM05D000391 ORTHO05D000293 4.1e-10 67.4 38 81.6
CARHR293750 Cardamine hirsuta HOM05D000391 ORTHO05D000293 4.1e-10 67.4 38 81.6
AT5G10220 Arabidopsis thaliana HOM05D000391 ORTHO05D000293 6.9e-10 66.6 38 81.6
Carub.0006s0868 Capsella rubella HOM05D000391 ORTHO05D000293 6.9e-10 66.6 38 81.6
AL6G20710 Arabidopsis lyrata HOM05D000391 ORTHO05D000293 9.1e-10 66.2 38 81.6
Haze_24938 Corylus avellana HOM05D000391 ORTHO05D000293 1.2e-09 65.9 50 68.0
Hund16281 Selenicereus undatus HOM05D000391 ORTHO05D000293 1.2e-09 65.9 38 76.3
Cpa.g.sc213.13 Carica papaya HOM05D000391 ORTHO05D000293 1.5e-09 65.5 38 84.2
MELO3C019002.2 Cucumis melo HOM05D000391 ORTHO05D000293 1.5e-09 65.5 38 84.2
Aa31LG1G16920 Aethionema arabicum HOM05D000391 ORTHO05D000293 2.0e-09 65.1 38 78.9
CiPaw.03G141600 Carya illinoinensis HOM05D000391 ORTHO05D000293 2.0e-09 65.1 38 81.6
Sp2g28100 Schrenkiella parvula HOM05D000391 ORTHO05D000293 2.0e-09 65.1 38 76.3
TAR381G0077 Trochodendron aralioides HOM05D000391 ORTHO05D000293 3.4e-09 64.3 38 78.9
Cfa002668 Carpinus fangiana HOM05D000391 ORTHO05D000293 4.5e-09 63.9 38 81.6
CiPaw.04G099200 Carya illinoinensis HOM05D000391 ORTHO05D000293 4.5e-09 63.9 38 78.9
DCAR_014226 Daucus carota HOM05D000391 ORTHO05D000293 4.5e-09 63.9 38 81.6
Sc16g0005650 Simmondsia chinensis HOM05D000391 ORTHO05D000293 4.5e-09 63.9 38 76.3
SGA_v2.0_scaffold28G11920 Striga asiatica HOM05D000391 ORTHO05D000293 4.5e-09 63.9 38 81.6
Haze_24939 Corylus avellana HOM05D000391 ORTHO05D000293 5.9e-09 63.5 38 81.6
BcaB08g37128 Brassica carinata HOM05D000391 ORTHO05D000293 7.7e-09 63.2 47 70.2
AUR62003790 Chenopodium quinoa HOM05D000391 ORTHO05D000293 7.7e-09 63.2 37 78.4
ClCG10G008760 Citrullus lanatus HOM05D000391 ORTHO05D000293 7.7e-09 63.2 38 78.9
CsaV3_4G008930 Cucumis sativus L. HOM05D000391 ORTHO05D000293 7.7e-09 63.2 39 79.5
Lj2A550T28 Lonicera japonica HOM05D000391 ORTHO05D000293 7.7e-09 63.2 38 81.6
Manes.12G135200 Manihot esculenta HOM05D000391 ORTHO05D000293 1.0e-08 62.8 38 81.6
Nitab4.5_0003629g0020 Nicotiana tabacum HOM05D000391 ORTHO05D000293 1.0e-08 62.8 38 81.6
Hund13627 Selenicereus undatus HOM05D000391 ORTHO05D000293 1.0e-08 62.8 37 78.4
BcaB07g29769 Brassica carinata HOM05D000391 ORTHO05D000293 1.3e-08 62.4 38 73.7
Thhalv10004625m.g Eutrema salsugineum HOM05D000391 ORTHO05D000293 1.3e-08 62.4 38 76.3
Nitab4.5_0000104g0050 Nicotiana tabacum HOM05D000391 ORTHO05D000293 1.3e-08 62.4 38 81.6
Lsat_1_v5_gn_9_41421 Lactuca sativa HOM05D000391 ORTHO05D000293 1.7e-08 62.0 37 81.1
CSS0001458 Camellia sinensis var. sinensis HOM05D000391 ORTHO05D000293 2.2e-08 61.6 38 78.9
HanXRQChr05g0147371 Helianthus annuus HOM05D000391 ORTHO05D000293 2.2e-08 61.6 37 81.1
Manes.18G068000 Manihot esculenta HOM05D000391 ORTHO05D000293 2.2e-08 61.6 38 73.7
PGR102G1928 Punica granatum HOM05D000391 ORTHO05D000293 2.2e-08 61.6 38 78.9
BcaC03g18297 Brassica carinata HOM05D000391 ORTHO05D000293 2.9e-08 61.2 38 71.1
A02p43610 Brassica napus HOM05D000391 ORTHO05D000293 2.9e-08 61.2 38 71.1
C02p63730 Brassica napus HOM05D000391 ORTHO05D000293 2.9e-08 61.2 38 71.1
BolC2t12441H Brassica oleracea HOM05D000391 ORTHO05D000293 2.9e-08 61.2 38 71.1
BraA02t09287Z Brassica rapa HOM05D000391 ORTHO05D000293 2.9e-08 61.2 38 71.1
ECA232G4033 Erigeron canadensis HOM05D000391 ORTHO05D000293 2.9e-08 61.2 39 76.9
QL12p036593 Quercus lobata HOM05D000391 ORTHO05D000293 2.9e-08 61.2 38 76.3
Sabra02G0075400 Salix brachista HOM05D000391 ORTHO05D000293 2.9e-08 61.2 38 71.1
PGSC0003DMG400001879 Solanum tuberosum HOM05D000391 ORTHO05D000293 2.9e-08 61.2 38 81.6
Ah.02g122480 Amaranthus hybridus HOM05D000391 ORTHO05D000293 3.8e-08 60.8 37 75.7
Cfa013629 Carpinus fangiana HOM05D000391 ORTHO05D000293 3.8e-08 60.8 38 76.3
FAN19G0220 Fragaria x ananassa HOM05D000391 ORTHO05D000293 3.8e-08 60.8 38 76.3
FAN23G2483 Fragaria x ananassa HOM05D000391 ORTHO05D000293 3.8e-08 60.8 38 76.3
FAN26G0132 Fragaria x ananassa HOM05D000391 ORTHO05D000293 3.8e-08 60.8 38 76.3
FAN28G2893 Fragaria x ananassa HOM05D000391 ORTHO05D000293 3.8e-08 60.8 38 76.3
Peaxi162Scf00212g00073 Petunia axillaris HOM05D000391 ORTHO05D000293 3.8e-08 60.8 38 78.9
RcHm_v2.0_Chr2g0114431 Rosa chinensis HOM05D000391 ORTHO05D000293 3.8e-08 60.8 38 76.3
Solyc04g055170.3 Solanum lycopersicum HOM05D000391 ORTHO05D000293 3.8e-08 60.8 38 81.6
Sopen04g025030 Solanum pennellii HOM05D000391 ORTHO05D000293 3.8e-08 60.8 38 81.6
Ah.03g143520 Amaranthus hybridus HOM05D000391 ORTHO05D000293 5.0e-08 60.5 37 75.7
Nn5g30132 Nelumbo nucifera HOM05D000391 ORTHO05D000293 5.0e-08 60.5 38 73.7
TWI77G0077 Tripterygium wilfordii HOM05D000391 ORTHO05D000293 5.0e-08 60.5 38 73.7
Dinv21911 Davidia involucrata HOM05D000391 ORTHO05D000293 6.5e-08 60.1 38 76.3
Glyma.05G178700 Glycine max HOM05D000391 ORTHO05D000293 6.5e-08 60.1 38 71.1
Glyma.08G136200 Glycine max HOM05D000391 ORTHO05D000293 6.5e-08 60.1 38 71.1
Hma1.2p1_0047F.1_g027880 Hydrangea macrophylla HOM05D000391 ORTHO05D000293 6.5e-08 60.1 38 73.7
Oeu024535.1 Olea europaea HOM05D000391 ORTHO05D000293 6.5e-08 60.1 38 76.3
Aqoxy6G00805 Aquilegia oxysepala HOM05D000391 ORTHO05D000293 8.5e-08 59.7 38 73.7
QL06p049559 Quercus lobata HOM05D000391 ORTHO05D000293 8.5e-08 59.7 38 76.3
Sed0003047 Sechium edule HOM05D000391 ORTHO05D000293 8.5e-08 59.7 38 76.3
Eucgr.H04787 Eucalyptus grandis HOM05D000391 ORTHO05D000293 1.1e-07 59.3 38 71.1
Thecc.08G108100 Theobroma cacao HOM05D000391 ORTHO05D000293 1.1e-07 59.3 35 80.0
CAN.G1795.1 Capsicum annuum HOM05D000391 ORTHO05D000293 1.4e-07 58.9 38 78.9
Dinv13186 Davidia involucrata HOM05D000391 ORTHO05D000293 1.4e-07 58.9 38 73.7
unitig_21.g20604 Utricularia gibba HOM05D000391 ORTHO05D000293 1.9e-07 58.5 35 74.3
Atru.chr4.68 Acer truncatum HOM05D000391 ORTHO05D000293 2.5e-07 58.2 38 76.3
AUR62002012 Chenopodium quinoa HOM05D000391 ORTHO05D000293 2.5e-07 58.2 37 73.0
Eucgr.F02423 Eucalyptus grandis HOM05D000391 ORTHO05D000293 2.5e-07 58.2 38 73.7
Eucgr.F02433 Eucalyptus grandis HOM05D000391 ORTHO05D000293 2.5e-07 58.2 39 66.7
PSO210G5470 Papaver somniferum HOM05D000391 ORTHO05D000293 2.5e-07 58.2 38 68.4
PSO447G0082 Papaver somniferum HOM05D000391 ORTHO05D000293 2.5e-07 58.2 38 68.4
Potri.002G095600 Populus trichocarpa HOM05D000391 ORTHO05D000293 2.5e-07 58.2 38 68.4
SalBow7G3866 Salvia bowleyana HOM05D000391 ORTHO05D000293 2.5e-07 58.2 38 68.4
vmacro12955 Vaccinium macrocarpon HOM05D000391 ORTHO05D000293 2.5e-07 58.2 38 73.7
EL10Ac6g15099 Beta vulgaris HOM05D000391 ORTHO05D000293 3.2e-07 57.8 35 77.1
CSS0022554 Camellia sinensis var. sinensis HOM05D000391 ORTHO05D000293 3.2e-07 57.8 38 73.7
Migut.N02901 Erythranthe guttata HOM05D000391 ORTHO05D000293 3.2e-07 57.8 38 71.1
HanXRQChr15g0470901 Helianthus annuus HOM05D000391 ORTHO05D000293 3.2e-07 57.8 38 71.1
Hma1.2p1_0120F.1_g057350 Hydrangea macrophylla HOM05D000391 ORTHO05D000293 3.2e-07 57.8 38 73.7
Ciclev10001888m.g Citrus clementina HOM05D000391 ORTHO05D000293 4.2e-07 57.4 35 74.3
FvH4_1g20930 Fragaria vesca HOM05D000391 ORTHO05D000293 4.2e-07 57.4 37 75.7
RcHm_v2.0_Chr7g0239291 Rosa chinensis HOM05D000391 ORTHO05D000293 4.2e-07 57.4 35 74.3
Duzib093G0433 Durio zibethinus HOM05D000391 ORTHO05D000293 5.5e-07 57.0 35 77.1
Lsat_1_v5_gn_5_43401 Lactuca sativa HOM05D000391 ORTHO05D000293 5.5e-07 57.0 38 71.1
Lj4C103T9 Lonicera japonica HOM05D000391 ORTHO05D000293 5.5e-07 57.0 38 71.1
Lj4g0022424 Lotus japonicus HOM05D000391 ORTHO05D000293 5.5e-07 57.0 38 68.4
Lalb_Chr07g0185171 Lupinus albus HOM05D000391 ORTHO05D000293 5.5e-07 57.0 38 65.8
VMungo0251G1791 Vigna mungo HOM05D000391 ORTHO05D000293 5.5e-07 57.0 38 68.4
BcaB08g37126 Brassica carinata HOM05D000391 ORTHO05D000293 7.2e-07 56.6 31 87.1
Potri.007G092500 Populus trichocarpa HOM05D000391 ORTHO05D000293 7.2e-07 56.6 38 76.3
CDE05G0745 Ceratophyllum demersum HOM05D000391 ORTHO05D000293 9.4e-07 56.2 39 64.1
Cc07_g15280 Coffea canephora HOM05D000391 ORTHO05D000293 9.4e-07 56.2 41 65.9
Phvul.002G255700 Phaseolus vulgaris HOM05D000391 ORTHO05D000293 9.4e-07 56.2 38 68.4
Sabra07G0076800 Salix brachista HOM05D000391 ORTHO05D000293 9.4e-07 56.2 38 76.3
vmacro04748 Vaccinium macrocarpon HOM05D000391 ORTHO05D000293 9.4e-07 56.2 35 71.4
Actinidia38132 Actinidia chinensis HOM05D000391 ORTHO05D000293 1.2e-06 55.8 37 73.0
Lalb_Chr13g0295981 Lupinus albus HOM05D000391 ORTHO05D000293 1.2e-06 55.8 38 65.8
MD01G1029100 Malus domestica HOM05D000391 ORTHO05D000293 1.2e-06 55.8 39 66.7
TWI56G1314 Tripterygium wilfordii HOM05D000391 ORTHO05D000293 1.2e-06 55.8 38 73.7
TAR628G0619 Trochodendron aralioides HOM05D000391 ORTHO05D000293 1.2e-06 55.8 36 72.2
Atru.chr13.1203 Acer truncatum HOM05D000391 ORTHO05D000293 1.6e-06 55.5 38 68.4
Eucgr.F02429 Eucalyptus grandis HOM05D000391 ORTHO05D000293 1.6e-06 55.5 38 71.1
MBI02_g08728_MAGBIO Magnolia biondii HOM05D000391 ORTHO05D000293 1.6e-06 55.5 38 73.7
Medtr0276s0050 Medicago truncatula HOM05D000391 ORTHO05D000293 1.6e-06 55.5 37 73.0
Nitab4.5_0006967g0070 Nicotiana tabacum HOM05D000391 ORTHO05D000293 1.6e-06 55.5 41 65.9
Prupe.6G186600 Prunus persica HOM05D000391 ORTHO05D000293 1.6e-06 55.5 38 65.8
COL.COLO4_16417 Corchorus olitorius HOM05D000391 ORTHO05D000293 2.1e-06 55.1 35 71.4
Medtr5g063670 Medicago truncatula HOM05D000391 ORTHO05D000293 2.1e-06 55.1 35 71.4
Nitab4.5_0000715g0020 Nicotiana tabacum HOM05D000391 ORTHO05D000293 2.1e-06 55.1 41 65.9
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 2.1e-06 55.1 37 73.0
MSTRG.24972 Avicennia marina HOM05D000391 ORTHO05D000293 2.7e-06 54.7 38 68.4
CDE05G0554 Ceratophyllum demersum HOM05D000391 ORTHO05D000293 2.7e-06 54.7 39 64.1
Dinv13022 Davidia involucrata HOM05D000391 ORTHO05D000293 2.7e-06 54.7 35 74.3
Gohir.1Z049526 Gossypium hirsutum HOM05D000391 ORTHO05D000293 2.7e-06 54.7 37 73.0
Gohir.A11G052300 Gossypium hirsutum HOM05D000391 ORTHO05D000293 2.7e-06 54.7 37 73.0
Gohir.D11G055700 Gossypium hirsutum HOM05D000391 ORTHO05D000293 2.7e-06 54.7 37 73.0
Gorai.007G060900 Gossypium raimondii HOM05D000391 ORTHO05D000293 2.7e-06 54.7 37 73.0
Oeu002175.1 Olea europaea HOM05D000391 ORTHO05D000293 2.7e-06 54.7 37 73.0
RcHm_v2.0_Chr2g0114411 Rosa chinensis HOM05D000391 ORTHO05D000293 2.7e-06 54.7 39 69.2
Sabra05G0062500 Salix brachista HOM05D000391 ORTHO05D000293 2.7e-06 54.7 38 73.7
Sc03g0002100 Simmondsia chinensis HOM05D000391 ORTHO05D000293 2.7e-06 54.7 38 65.8
Ca_12411_v3 Cicer arietinum L. HOM05D000391 ORTHO05D000293 3.6e-06 54.3 35 71.4
FAN19G1475 Fragaria x ananassa HOM05D000391 ORTHO05D000293 4.7e-06 53.9 39 66.7
FAN23G0733 Fragaria x ananassa HOM05D000391 ORTHO05D000293 4.7e-06 53.9 39 66.7
FAN28G1497 Fragaria x ananassa HOM05D000391 ORTHO05D000293 4.7e-06 53.9 39 66.7
Gohir.A05G227300 Gossypium hirsutum HOM05D000391 ORTHO05D000293 4.7e-06 53.9 35 71.4
Gohir.D05G229800 Gossypium hirsutum HOM05D000391 ORTHO05D000293 4.7e-06 53.9 35 71.4
Gorai.009G237900 Gossypium raimondii HOM05D000391 ORTHO05D000293 4.7e-06 53.9 35 71.4
Lsat_1_v5_gn_6_102961 Lactuca sativa HOM05D000391 ORTHO05D000293 4.7e-06 53.9 37 70.3
Psat7g054960 Pisum sativum HOM05D000391 ORTHO05D000293 4.7e-06 53.9 37 70.3
SalBow5G1354 Salvia bowleyana HOM05D000391 ORTHO05D000293 4.7e-06 53.9 37 62.2
SalBow5G2162 Salvia bowleyana HOM05D000391 ORTHO05D000293 4.7e-06 53.9 37 62.2
GSVIVG01009021001 Vitis vinifera HOM05D000391 ORTHO05D000293 4.7e-06 53.9 38 71.1
ATR0753G072 Amborella trichopoda HOM05D000391 ORTHO05D000293 6.1e-06 53.5 38 65.8
arahy.Tifrunner.gnm1.ann1.47PCZJ Arachis hypogaea HOM05D000391 ORTHO05D000293 6.1e-06 53.5 37 64.9
arahy.Tifrunner.gnm1.ann1.KS7J3Q Arachis hypogaea HOM05D000391 ORTHO05D000293 6.1e-06 53.5 37 64.9
Cpa.g.sc36.126 Carica papaya HOM05D000391 ORTHO05D000293 6.1e-06 53.5 38 68.4
ECA246G0457 Erigeron canadensis HOM05D000391 ORTHO05D000293 6.1e-06 53.5 38 68.4
Actinidia28162 Actinidia chinensis HOM05D000391 ORTHO05D000293 7.9e-06 53.1 38 65.8
ATR0753G076 Amborella trichopoda HOM05D000391 ORTHO05D000293 7.9e-06 53.1 38 65.8
MSTRG.15710 Avicennia marina HOM05D000391 ORTHO05D000293 7.9e-06 53.1 38 68.4
Phvul.008G173100 Phaseolus vulgaris HOM05D000391 ORTHO05D000293 7.9e-06 53.1 34 76.5
Rhsim10G0162800 Rhododendron simsii HOM05D000391 ORTHO05D000293 7.9e-06 53.1 38 68.4
Sed0015639 Sechium edule HOM05D000391 ORTHO05D000293 7.9e-06 53.1 37 73.0


User provided reference genes

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