Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 1.7e-120 436.0 217 100.0
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 3.0e-90 335.5 166 99.4
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 8.3e-88 327.4 166 97.0
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.9e-47 193.4 97 100.0
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 1.6e-46 190.3 97 99.0
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 4.6e-46 188.7 97 95.9
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 4.6e-46 188.7 97 97.9
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 1.0e-45 187.6 97 94.8
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 3.0e-45 186.0 97 94.8
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 3.0e-45 186.0 97 94.8
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 3.9e-45 185.7 97 94.8
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 1.5e-44 183.7 97 93.8
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 2.5e-44 183.0 97 92.8
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 3.3e-44 182.6 97 91.8
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.6e-43 180.3 97 90.7
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 4.2e-39 165.6 97 82.5
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 1.2e-38 164.1 97 79.4
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 2.6e-33 146.4 132 59.1
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 5.8e-33 145.2 97 69.1
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 1.7e-32 143.7 122 60.7
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.1e-31 141.0 97 67.0
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 1.1e-31 141.0 97 68.0
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 1.9e-31 140.2 97 66.0
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 1.9e-31 140.2 97 68.0
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 2.5e-31 139.8 97 68.0
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 2.5e-31 139.8 141 51.8
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 3.2e-31 139.4 97 68.0
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 3.2e-31 139.4 97 68.0
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 4.2e-31 139.0 97 68.0
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 4.2e-31 139.0 97 66.0
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 7.1e-31 138.3 97 64.9
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 9.3e-31 137.9 100 67.0
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 1.6e-30 137.1 97 68.0
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.6e-30 137.1 97 66.0
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 1.6e-30 137.1 97 63.9
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 2.1e-30 136.7 97 66.0
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 2.1e-30 136.7 115 60.0
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 2.1e-30 136.7 96 67.7
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 2.1e-30 136.7 97 64.9
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 2.7e-30 136.3 106 65.1
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 2.7e-30 136.3 97 66.0
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 2.7e-30 136.3 97 63.9
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 3.5e-30 136.0 97 63.9
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 3.5e-30 136.0 97 64.9
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 3.5e-30 136.0 97 66.0
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 4.6e-30 135.6 97 63.9
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 4.6e-30 135.6 97 63.9
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 4.6e-30 135.6 124 56.5
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 4.6e-30 135.6 97 64.9
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 6.0e-30 135.2 97 66.0
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 6.0e-30 135.2 97 66.0
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 7.9e-30 134.8 93 66.7
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.0e-29 134.4 94 66.0
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.0e-29 134.4 96 67.7
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 1.3e-29 134.0 96 66.7
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 1.3e-29 134.0 124 55.6
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 1.3e-29 134.0 97 64.9
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.8e-29 133.7 96 65.6
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 2.3e-29 133.3 109 57.8
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.3e-29 133.3 123 56.1
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 2.3e-29 133.3 97 63.9
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 3.0e-29 132.9 97 64.9
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 3.9e-29 132.5 97 62.9
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 5.1e-29 132.1 97 66.0
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 6.7e-29 131.7 120 57.5
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 8.7e-29 131.3 97 64.9
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 1.1e-28 131.0 99 60.6
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 1.5e-28 130.6 104 61.5
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 2.5e-28 129.8 96 64.6
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 4.3e-28 129.0 97 63.9
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 5.7e-28 128.6 115 52.2
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 5.7e-28 128.6 98 64.3
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 5.7e-28 128.6 97 58.8
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 5.7e-28 128.6 98 63.3
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 7.4e-28 128.3 97 60.8
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 2.8e-27 126.3 97 62.9
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 2.8e-27 126.3 97 59.8
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 4.8e-27 125.6 115 56.5
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 8.2e-27 124.8 97 59.8
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 8.2e-27 124.8 97 58.8
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 1.8e-26 123.6 97 60.8
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 6.9e-26 121.7 143 47.6
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 3.4e-25 119.4 103 56.3
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.0e-24 117.9 103 54.4
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 3.8e-24 115.9 102 53.9
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 3.8e-24 115.9 97 53.6
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 6.5e-24 115.2 94 54.3
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 1.4e-23 114.0 95 52.6
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 1.2e-22 110.9 97 55.7
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 3.6e-22 109.4 120 45.8
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 3.6e-22 109.4 77 66.2
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 3.0e-21 106.3 98 52.0
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 8.7e-21 104.8 115 45.2
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 3.3e-20 102.8 97 53.6
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 3.3e-20 102.8 97 54.6
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 4.8e-19 99.0 167 37.1
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 8.2e-19 98.2 70 65.7
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 1.5e-17 94.0 97 43.3
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 2.6e-17 93.2 77 59.7
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 3.4e-17 92.8 65 66.2
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 4.5e-17 92.4 96 52.1
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 1.4e-15 87.4 96 45.8
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 3.6e-14 82.8 97 43.3
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 4.6e-14 82.4 73 64.4
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 5.7e-12 75.5 61 52.5
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 1.3e-11 74.3 118 37.3
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 8.2e-11 71.6 52 57.7
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 8.2e-11 71.6 49 67.3
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 1.7e-08 63.9 50 62.0
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 9.4e-07 58.2 36 72.2
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 4.7e-06 55.8 67 44.8
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 6.1e-06 55.5 27 100.0


User provided reference genes

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