Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 3.6e-126 454.9 227 100.0
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 4.4e-124 448.0 227 98.2
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 1.9e-87 326.2 166 97.0
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 2.7e-81 305.8 158 98.1
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 6.0e-81 304.7 158 98.1
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 2.3e-80 302.8 158 96.2
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 2.3e-80 302.8 158 97.5
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 2.3e-80 302.8 165 93.9
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 3.0e-80 302.4 158 96.8
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 5.1e-80 301.6 158 95.6
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 4.3e-79 298.5 158 94.9
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 2.8e-78 295.8 158 94.3
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 3.7e-78 295.4 158 93.7
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 3.1e-77 292.4 158 92.4
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 7.9e-73 277.7 158 86.7
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 6.7e-72 274.6 158 84.8
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 5.5e-66 255.0 137 94.2
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 1.3e-64 250.4 158 76.6
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 1.3e-64 250.4 183 68.9
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 1.4e-61 240.4 158 72.8
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 2.4e-61 239.6 199 62.8
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 4.1e-61 238.8 158 72.2
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 9.0e-61 237.7 158 72.2
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 2.6e-60 236.1 158 71.5
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 2.6e-60 236.1 158 70.9
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 2.6e-60 236.1 158 70.9
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 5.9e-60 235.0 182 66.5
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 5.9e-60 235.0 158 72.8
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 5.9e-60 235.0 158 72.2
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 5.9e-60 235.0 158 71.5
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 7.7e-60 234.6 158 72.8
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 7.7e-60 234.6 158 70.9
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 1.0e-59 234.2 158 69.6
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.0e-59 234.2 158 70.3
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 1.0e-59 234.2 158 72.2
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 2.2e-59 233.0 158 69.0
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 2.9e-59 232.6 158 69.0
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 3.8e-59 232.3 158 70.9
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 3.8e-59 232.3 158 70.3
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 5.0e-59 231.9 158 70.3
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 5.0e-59 231.9 158 70.9
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 6.5e-59 231.5 158 69.0
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 8.5e-59 231.1 158 69.0
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 8.5e-59 231.1 158 69.0
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 1.1e-58 230.7 158 68.4
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.1e-58 230.7 158 68.4
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 1.1e-58 230.7 158 68.4
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 1.9e-58 229.9 158 69.0
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 1.9e-58 229.9 159 70.4
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 5.5e-58 228.4 165 67.3
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 1.2e-57 227.3 176 65.9
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.2e-57 227.3 158 68.4
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 2.1e-57 226.5 158 67.7
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 7.9e-57 224.6 158 65.8
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 7.9e-57 224.6 158 67.1
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 1.0e-56 224.2 159 69.8
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 1.8e-56 223.4 160 66.2
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.8e-56 223.4 158 67.1
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 3.9e-56 222.2 162 69.1
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 3.9e-56 222.2 178 63.5
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 6.7e-56 221.5 158 67.1
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 8.8e-56 221.1 157 63.7
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 1.5e-55 220.3 158 65.8
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 3.3e-55 219.2 156 67.9
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 4.3e-55 218.8 158 66.5
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 3.7e-54 215.7 158 66.5
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 2.4e-53 213.0 164 63.4
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 4.1e-53 212.2 158 64.6
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 9.1e-53 211.1 156 64.7
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 7.7e-52 208.0 145 70.3
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 7.7e-52 208.0 145 67.6
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 1.3e-51 207.2 145 69.0
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 2.9e-51 206.1 138 71.0
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 3.8e-51 205.7 158 65.2
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 3.8e-51 205.7 196 54.1
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 5.0e-51 205.3 159 61.0
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.2e-49 200.7 176 58.5
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 2.1e-49 199.9 188 54.3
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 2.6e-47 193.0 181 53.6
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 3.3e-47 192.6 139 67.6
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 4.4e-47 192.2 145 65.5
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.1e-45 187.6 158 62.0
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 1.4e-45 187.2 237 46.4
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 2.0e-44 183.3 154 55.8
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 2.6e-44 183.0 158 53.2
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 1.1e-42 177.6 145 62.1
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 1.1e-42 177.6 158 54.4
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 1.6e-41 173.7 88 100.0
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 2.0e-39 166.8 119 66.4
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 3.7e-38 162.5 175 50.9
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.1e-37 161.0 125 64.8
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 2.4e-37 159.8 158 50.6
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 3.1e-37 159.5 133 69.2
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 2.6e-36 156.4 132 54.5
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 1.5e-34 150.6 97 73.2
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 9.4e-34 147.9 179 47.5
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 3.6e-33 146.0 145 54.5
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 8.0e-33 144.8 109 64.2
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 1.0e-32 144.4 124 56.5
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 2.3e-32 143.3 107 62.6
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 6.8e-32 141.7 109 63.3
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 9.8e-31 137.9 97 67.0
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 1.1e-29 134.4 111 61.3
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 3.1e-29 132.9 93 66.7
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 5.4e-29 132.1 94 64.9
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.6e-28 130.6 94 62.8
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 4.5e-28 129.0 96 65.6
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 4.5e-28 129.0 98 66.3
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 7.7e-28 128.3 103 61.2
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 8.0e-25 118.2 75 77.3
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 2.3e-24 116.7 140 44.3
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 3.6e-17 92.8 155 31.6
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 3.6e-17 92.8 113 44.2
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.2e-13 79.7 49 77.6
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 2.0e-12 77.0 61 54.1
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 1.3e-11 74.3 49 71.4
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.0e-11 73.2 52 59.6
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 3.4e-07 59.7 36 83.3


User provided reference genes

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