Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p66510 Brassica napus HOM05D001843 ORTHO05D022026 7.6e-98 360.5 187 100.0
C09p66350 Brassica napus HOM05D001843 ORTHO05D022026 2.8e-92 342.0 187 96.8
C09p66600 Brassica napus HOM05D001843 ORTHO05D022026 8.2e-84 313.9 187 90.9
C09p66220 Brassica napus HOM05D001843 ORTHO05D022026 4.1e-83 311.6 187 90.4
C09p66430 Brassica napus HOM05D001843 ORTHO05D022026 4.1e-83 311.6 187 90.4
BolC9t59443H Brassica oleracea HOM05D001843 ORTHO05D022026 1.2e-82 310.1 187 89.8
A10p20300 Brassica napus HOM05D001843 ORTHO05D003411 3.4e-29 132.5 128 64.1
BraA10t44101Z Brassica rapa HOM05D001843 ORTHO05D003411 3.4e-29 132.5 128 64.1
C09p56900 Brassica napus HOM05D001843 ORTHO05D003411 4.4e-29 132.1 128 64.1
BolC9t58544H Brassica oleracea HOM05D001843 ORTHO05D003411 4.4e-29 132.1 128 64.1
Sp6g25010 Schrenkiella parvula HOM05D001843 ORTHO05D003411 2.7e-26 122.9 127 60.6
Thhalv10012551m.g Eutrema salsugineum HOM05D001843 ORTHO05D003411 6.6e-25 118.2 127 59.1
BraA02t05505Z Brassica rapa HOM05D001843 ORTHO05D003411 9.5e-24 114.4 127 56.7
A02p05540 Brassica napus HOM05D001843 ORTHO05D003411 2.8e-23 112.8 127 55.9
BNapus_Darmor_BZH_scaffold_38p02470 Brassica napus HOM05D001843 ORTHO05D003411 8.1e-23 111.3 127 55.9
Carub.0006s1774 Capsella rubella HOM05D001843 ORTHO05D003411 4.0e-22 109.0 125 56.0
AL6G30890 Arabidopsis lyrata HOM05D001843 ORTHO05D003411 1.5e-21 107.1 125 53.6
AT5G19400 Arabidopsis thaliana HOM05D001843 ORTHO05D003411 7.1e-19 98.2 117 54.7
Aa31LG1G8820 Aethionema arabicum HOM05D001843 ORTHO05D003411 3.9e-17 92.4 127 48.8
CARHR193550 Cardamine hirsuta HOM05D001843 ORTHO05D003411 1.1e-16 90.9 129 46.5
THA.LOC104799125 Tarenaya hassleriana HOM05D001843 ORTHO05D003411 2.1e-15 86.7 127 44.9
THA.LOC104811190 Tarenaya hassleriana HOM05D001843 ORTHO05D003411 1.3e-12 77.4 124 44.4
Sabra16G0169700 Salix brachista HOM05D001843 ORTHO05D003411 7.1e-11 71.6 128 43.0
Atru.chr3.2892 Acer truncatum HOM05D001843 ORTHO05D003411 1.2e-10 70.9 130 43.1
Ciclev10014151m.g Citrus clementina HOM05D001843 ORTHO05D003411 4.6e-10 68.9 130 40.0
Gohir.A05G070900 Gossypium hirsutum HOM05D001843 ORTHO05D003411 7.8e-10 68.2 128 37.5
PSO339G3633 Papaver somniferum HOM05D001843 ORTHO05D003411 7.8e-10 68.2 128 41.4
Cpa.g.sc157.60 Carica papaya HOM05D001843 ORTHO05D003411 1.7e-09 67.0 129 41.1
CiPaw.13G150400 Carya illinoinensis HOM05D001843 ORTHO05D003411 1.7e-09 67.0 128 41.4
CiPaw.14G113000 Carya illinoinensis HOM05D001843 ORTHO05D003411 1.7e-09 67.0 128 42.2
Nn7g36713 Nelumbo nucifera HOM05D001843 ORTHO05D003411 1.7e-09 67.0 127 39.4
PSO384G4955 Papaver somniferum HOM05D001843 ORTHO05D003411 2.3e-09 66.6 128 40.6
GSVIVG01037278001 Vitis vinifera HOM05D001843 ORTHO05D003411 2.3e-09 66.6 130 40.8
CsaV3_1G043450 Cucumis sativus L. HOM05D001843 ORTHO05D003411 3.9e-09 65.9 125 37.6
COL.COLO4_32762 Corchorus olitorius HOM05D001843 ORTHO05D003411 5.1e-09 65.5 128 39.8
Medtr0175s0030 Medicago truncatula HOM05D001843 ORTHO05D003411 5.1e-09 65.5 128 40.6
TAR633G1910 Trochodendron aralioides HOM05D001843 ORTHO05D003411 5.1e-09 65.5 130 36.9
RcHm_v2.0_Chr5g0050561 Rosa chinensis HOM05D001843 ORTHO05D003411 6.6e-09 65.1 126 42.1
MD11G1184900 Malus domestica HOM05D001843 ORTHO05D003411 8.6e-09 64.7 129 40.3
Potri.001G275400 Populus trichocarpa HOM05D001843 ORTHO05D003411 8.6e-09 64.7 128 40.6
QL01p017120 Quercus lobata HOM05D001843 ORTHO05D003411 8.6e-09 64.7 129 39.5
BcaC03g13674 Brassica carinata HOM05D001843 ORTHO05D003411 1.1e-08 64.3 124 41.9
ClCG03G012560 Citrullus lanatus HOM05D001843 ORTHO05D003411 1.1e-08 64.3 125 38.4
FvH4_3g27840 Fragaria vesca HOM05D001843 ORTHO05D003411 1.5e-08 63.9 126 41.3
FAN11G3218 Fragaria x ananassa HOM05D001843 ORTHO05D003411 1.5e-08 63.9 126 41.3
Glyma.20G040700 Glycine max HOM05D001843 ORTHO05D003411 1.5e-08 63.9 128 42.2
MD03G1165600 Malus domestica HOM05D001843 ORTHO05D003411 1.9e-08 63.5 129 41.1
TPR.G24344 Trifolium pratense HOM05D001843 ORTHO05D003411 1.9e-08 63.5 128 41.4
MELO3C015113.2 Cucumis melo HOM05D001843 ORTHO05D003411 2.5e-08 63.2 125 36.8
Dinv15036 Davidia involucrata HOM05D001843 ORTHO05D003411 2.5e-08 63.2 129 41.1
FAN16G1122 Fragaria x ananassa HOM05D001843 ORTHO05D003411 2.5e-08 63.2 126 41.3
Gohir.A09G110450 Gossypium hirsutum HOM05D001843 ORTHO05D003411 2.5e-08 63.2 125 37.6
Gorai.009G074900 Gossypium raimondii HOM05D001843 ORTHO05D003411 2.5e-08 63.2 125 38.4
Psat5g197600 Pisum sativum HOM05D001843 ORTHO05D003411 2.5e-08 63.2 124 40.3
Haze_23231 Corylus avellana HOM05D001843 ORTHO05D003411 3.3e-08 62.8 129 38.0
Gohir.D05G073800 Gossypium hirsutum HOM05D001843 ORTHO05D003411 3.3e-08 62.8 125 38.4
Lalb_Chr04g0249221 Lupinus albus HOM05D001843 ORTHO05D003411 3.3e-08 62.8 128 41.4
Lalb_Chr10g0106241 Lupinus albus HOM05D001843 ORTHO05D003411 3.3e-08 62.8 124 37.1
Sed0022809 Sechium edule HOM05D001843 ORTHO05D003411 3.3e-08 62.8 125 38.4
Prupe.4G265800 Prunus persica HOM05D001843 ORTHO05D003411 4.3e-08 62.4 119 42.0
arahy.Tifrunner.gnm1.ann1.7N5RT2 Arachis hypogaea HOM05D001843 ORTHO05D003411 5.6e-08 62.0 128 41.4
Duzib168G0131 Durio zibethinus HOM05D001843 ORTHO05D003411 5.6e-08 62.0 128 36.7
Glyma.07G231800 Glycine max HOM05D001843 ORTHO05D003411 5.6e-08 62.0 128 42.2
arahy.Tifrunner.gnm1.ann1.N51291 Arachis hypogaea HOM05D001843 ORTHO05D003411 7.3e-08 61.6 128 41.4
Gorai.013G253600 Gossypium raimondii HOM05D001843 ORTHO05D003411 7.3e-08 61.6 130 35.4
FAN25G3852 Fragaria x ananassa HOM05D001843 ORTHO05D003411 9.6e-08 61.2 126 41.3
PGR102G3331 Punica granatum HOM05D001843 ORTHO05D003411 9.6e-08 61.2 127 38.6
FAN21G1175 Fragaria x ananassa HOM05D001843 ORTHO05D003411 1.2e-07 60.8 126 41.3
Gohir.A13G218800 Gossypium hirsutum HOM05D001843 ORTHO05D003411 1.2e-07 60.8 130 35.4
Gohir.D13G222500 Gossypium hirsutum HOM05D001843 ORTHO05D003411 1.2e-07 60.8 130 35.4
DCAR_013639 Daucus carota HOM05D001843 ORTHO05D003411 1.6e-07 60.5 132 38.6
Lj6g0018672 Lotus japonicus HOM05D001843 ORTHO05D003411 2.1e-07 60.1 130 38.5
Lalb_Chr17g0347901 Lupinus albus HOM05D001843 ORTHO05D003411 2.1e-07 60.1 148 38.5
TAR369G0365 Trochodendron aralioides HOM05D001843 ORTHO05D003411 2.1e-07 60.1 130 35.4
Lj1C1093G8 Lonicera japonica HOM05D001843 ORTHO05D003411 2.8e-07 59.7 132 38.6
Manes.02G139200 Manihot esculenta HOM05D001843 ORTHO05D003411 2.8e-07 59.7 130 37.7
CSS0047730 Camellia sinensis var. sinensis HOM05D001843 ORTHO05D003411 3.6e-07 59.3 129 37.2
Duzib150G0706 Durio zibethinus HOM05D001843 ORTHO05D003411 3.6e-07 59.3 129 35.7
Thecc.09G248200 Theobroma cacao HOM05D001843 ORTHO05D003411 3.6e-07 59.3 129 37.2
Eucgr.C04149 Eucalyptus grandis HOM05D001843 ORTHO05D003411 4.7e-07 58.9 127 37.8
TAR636G1222 Trochodendron aralioides HOM05D001843 ORTHO05D003411 4.7e-07 58.9 132 37.9
Actinidia38162 Actinidia chinensis HOM05D001843 ORTHO05D003411 6.2e-07 58.5 129 37.2
Ca_01866_v3 Cicer arietinum L. HOM05D001843 ORTHO05D003411 6.2e-07 58.5 130 40.0
Migut.J01661 Erythranthe guttata HOM05D001843 ORTHO05D003411 6.2e-07 58.5 130 34.6
Rhsim03G0039500 Rhododendron simsii HOM05D001843 ORTHO05D003411 6.2e-07 58.5 129 36.4
TAR623G1343 Trochodendron aralioides HOM05D001843 ORTHO05D003411 6.2e-07 58.5 127 38.6
Medtr5g089510 Medicago truncatula HOM05D001843 ORTHO05D003411 8.1e-07 58.2 128 39.1
LjContig00564g0007413 Lotus japonicus HOM05D001843 ORTHO05D003411 1.4e-06 57.4 128 38.3
MBI14_g16108_MAGBIO Magnolia biondii HOM05D001843 ORTHO05D003411 1.4e-06 57.4 126 35.7
SalBow6G4459 Salvia bowleyana HOM05D001843 ORTHO05D003411 1.4e-06 57.4 135 35.6
Aqoxy2G00385 Aquilegia oxysepala HOM05D001843 ORTHO05D003411 1.8e-06 57.0 128 35.2
Gohir.D09G106800 Gossypium hirsutum HOM05D001843 ORTHO05D003411 1.8e-06 57.0 125 36.0
Gorai.006G124400 Gossypium raimondii HOM05D001843 ORTHO05D003411 1.8e-06 57.0 125 36.0
Zm00001eb097300 Zea mays HOM05D001843 ORTHO05D003411 1.8e-06 57.0 129 37.2
Nitab4.5_0001052g0120 Nicotiana tabacum HOM05D001843 ORTHO05D003411 2.4e-06 56.6 128 39.8
Nitab4.5_0005263g0050 Nicotiana tabacum HOM05D001843 ORTHO05D003411 2.4e-06 56.6 128 39.8
Oeu057789.1 Olea europaea HOM05D001843 ORTHO05D003411 2.4e-06 56.6 130 34.6
Oeu057790.3 Olea europaea HOM05D001843 ORTHO05D003411 2.4e-06 56.6 130 34.6
Oeu022965.1 Olea europaea HOM05D001843 ORTHO05D003411 3.1e-06 56.2 132 36.4
Phvul.006G014200 Phaseolus vulgaris HOM05D001843 ORTHO05D003411 3.1e-06 56.2 128 38.3
Ah.04g150960 Amaranthus hybridus HOM05D001843 ORTHO05D003411 4.0e-06 55.8 94 39.4
Psat0ss3759g0160 Pisum sativum HOM05D001843 ORTHO05D003411 4.0e-06 55.8 124 35.5
PGSC0003DMG400012944 Solanum tuberosum HOM05D001843 ORTHO05D003411 4.0e-06 55.8 132 35.6
Dinv09713 Davidia involucrata HOM05D001843 ORTHO05D003411 5.2e-06 55.5 127 37.8
HanXRQChr04g0096761 Helianthus annuus HOM05D001843 ORTHO05D003411 5.2e-06 55.5 126 33.3
VMungo0540G0682 Vigna mungo HOM05D001843 ORTHO05D003411 5.2e-06 55.5 128 37.5
Actinidia16384 Actinidia chinensis HOM05D001843 ORTHO05D003411 6.8e-06 55.1 125 38.4
Actinidia24454 Actinidia chinensis HOM05D001843 ORTHO05D003411 6.8e-06 55.1 125 38.4
EL10Ac3g07233 Beta vulgaris HOM05D001843 ORTHO05D003411 6.8e-06 55.1 130 35.4
Ca_06209_v3 Cicer arietinum L. HOM05D001843 ORTHO05D003411 6.8e-06 55.1 116 40.5


User provided reference genes

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