Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 8.7e-108 393.7 201 100.0
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 2.5e-107 392.1 201 99.5
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.7e-95 352.8 194 93.8
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 2.7e-93 345.5 194 91.2
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 3.0e-92 342.0 195 89.7
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 5.1e-92 341.3 189 91.0
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 8.8e-92 340.5 189 90.5
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.5e-91 339.7 194 88.7
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 2.6e-88 328.9 189 88.4
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 5.9e-88 327.8 191 89.0
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 9.7e-83 310.5 194 85.1
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 1.8e-81 306.2 189 80.4
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 5.3e-81 304.7 181 84.0
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 1.2e-80 303.5 158 98.7
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 7.7e-80 300.8 158 97.5
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 2.3e-76 289.3 174 87.4
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 6.5e-71 271.2 170 76.5
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 1.9e-70 269.6 170 76.5
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 5.2e-68 261.5 172 72.1
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 9.8e-67 257.3 169 72.8
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 1.3e-66 256.9 178 69.1
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 1.3e-66 256.9 180 70.6
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 1.7e-66 256.5 177 69.5
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.7e-66 256.5 172 72.1
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 1.7e-66 256.5 189 65.6
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 2.2e-66 256.1 189 67.7
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 8.3e-66 254.2 169 72.2
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.1e-65 253.8 189 65.1
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.1e-65 253.8 189 65.1
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 1.1e-65 253.8 170 71.8
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 3.1e-65 252.3 170 68.8
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 3.1e-65 252.3 189 65.1
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 5.4e-65 251.5 170 71.8
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 1.2e-64 250.4 181 68.0
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 2.0e-64 249.6 179 68.7
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 2.7e-64 249.2 185 64.3
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 4.5e-64 248.4 179 65.9
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 4.5e-64 248.4 170 69.4
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 5.9e-64 248.1 166 69.9
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 7.7e-64 247.7 179 65.4
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 2.3e-63 246.1 170 68.8
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 5.0e-63 245.0 190 63.2
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 6.6e-63 244.6 179 64.8
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 6.6e-63 244.6 169 67.5
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 6.6e-63 244.6 191 63.9
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 6.6e-63 244.6 180 65.0
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 8.6e-63 244.2 200 63.0
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 1.5e-62 243.4 193 63.7
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 3.3e-62 242.3 180 64.4
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 4.2e-62 241.9 189 62.4
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 5.5e-62 241.5 179 66.5
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 5.5e-62 241.5 187 61.5
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.2e-61 240.4 173 67.1
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.6e-61 240.0 190 63.7
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 6.1e-61 238.0 198 61.1
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 6.1e-61 238.0 165 70.3
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 1.8e-60 236.5 188 62.8
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 1.8e-60 236.5 179 67.0
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 1.8e-60 236.5 189 61.4
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 8.9e-60 234.2 169 65.7
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 4.4e-59 231.9 169 65.7
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 2.2e-58 229.6 176 64.8
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 3.7e-58 228.8 175 63.4
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 6.3e-58 228.0 156 69.9
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 6.3e-58 228.0 165 66.7
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 8.3e-58 227.6 172 60.5
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 1.4e-57 226.9 179 60.3
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 4.5e-56 221.9 158 67.1
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 1.3e-55 220.3 158 66.5
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.7e-55 219.9 187 59.4
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 5.0e-55 218.4 171 60.2
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.1e-54 217.2 195 57.9
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 2.1e-53 213.0 167 62.3
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 4.7e-53 211.8 158 64.6
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 6.1e-53 211.5 179 60.9
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 8.0e-53 211.1 176 60.8
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 1.0e-52 210.7 138 72.5
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 2.3e-52 209.5 165 61.2
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 2.6e-51 206.1 181 57.5
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 8.3e-50 201.1 259 45.9
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 3.0e-47 192.6 168 60.1
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 2.5e-46 189.5 168 55.4
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 3.3e-46 189.1 161 55.9
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 7.3e-46 188.0 194 58.2
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 7.3e-46 188.0 97 99.0
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 1.2e-45 187.2 161 53.4
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 2.8e-45 186.0 166 57.8
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 2.6e-43 179.5 158 55.1
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 2.9e-42 176.0 186 51.1
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 5.4e-41 171.8 119 68.1
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 1.0e-39 167.5 177 52.5
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 1.0e-39 167.5 161 52.2
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 1.5e-38 163.7 140 60.0
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.5e-38 163.7 125 65.6
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 9.5e-38 161.0 122 61.5
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 3.6e-37 159.1 133 69.2
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 8.1e-37 157.9 136 55.9
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 1.2e-35 154.1 103 68.9
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 1.5e-35 153.7 132 53.8
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 2.0e-35 153.3 105 67.6
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 2.6e-35 152.9 162 51.9
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 5.8e-35 151.8 105 65.7
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 2.2e-34 149.8 109 66.1
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 2.2e-34 149.8 107 67.3
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 4.9e-34 148.7 97 72.2
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.4e-33 147.1 115 61.7
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 6.0e-32 141.7 118 60.2
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 3.3e-30 136.0 97 66.0
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 4.7e-29 132.1 98 67.3
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 7.1e-25 118.2 75 77.3
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 1.3e-23 114.0 140 43.6
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 5.6e-22 108.6 150 41.3
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 9.3e-17 91.3 83 53.0
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.2e-16 90.9 155 31.6
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 3.0e-15 86.3 71 52.1
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 2.8e-13 79.7 49 77.6
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 1.2e-11 74.3 49 71.4
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 3.0e-07 59.7 36 83.3


User provided reference genes

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