Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 2.3e-185 652.1 345 100.0
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 6.8e-185 650.6 345 99.4
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 8.9e-185 650.2 345 99.7
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 3.2e-182 641.7 357 96.1
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 3.5e-181 638.3 345 97.4
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 3.9e-180 634.8 345 96.8
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 7.3e-179 630.6 345 95.9
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 9.5e-179 630.2 345 96.5
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 2.8e-178 628.6 345 96.2
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 2.8e-178 628.6 345 96.2
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 8.1e-178 627.1 345 95.9
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 8.1e-178 627.1 345 95.9
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 8.1e-178 627.1 345 95.9
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 8.1e-178 627.1 345 95.7
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 1.2e-176 623.2 345 95.1
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 3.7e-175 618.2 357 91.6
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 7.1e-166 587.4 345 88.1
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 1.6e-149 533.1 343 79.3
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 1.6e-149 533.1 343 79.6
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 3.5e-149 531.9 343 79.3
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 1.0e-148 530.4 343 78.1
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 6.7e-148 527.7 343 78.4
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 6.7e-148 527.7 343 79.3
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 8.7e-148 527.3 345 79.4
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 1.1e-147 526.9 343 78.4
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 1.1e-147 526.9 343 78.4
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 1.9e-147 526.2 343 79.6
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 1.9e-147 526.2 345 78.0
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 4.3e-147 525.0 343 77.3
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 5.6e-147 524.6 344 78.5
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 7.4e-147 524.2 343 78.1
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 9.6e-147 523.9 343 78.1
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 2.1e-146 522.7 343 76.7
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 2.8e-146 522.3 343 77.3
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 1.1e-145 520.4 344 78.5
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 2.4e-145 519.2 343 77.8
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 3.1e-145 518.8 343 77.6
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 9.0e-145 517.3 343 77.0
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 9.0e-145 517.3 344 76.5
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 2.6e-144 515.8 343 76.7
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 2.6e-144 515.8 343 77.3
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 3.4e-144 515.4 343 78.4
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 4.5e-144 515.0 343 77.0
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 5.8e-144 514.6 344 76.2
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 1.3e-143 513.5 343 77.0
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 1.3e-143 513.5 343 77.8
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 2.2e-143 512.7 344 76.7
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 3.8e-143 511.9 343 76.7
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 3.8e-143 511.9 343 77.3
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 6.4e-143 511.1 341 76.2
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 1.4e-142 510.0 343 77.0
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 5.5e-142 508.1 343 74.9
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 9.3e-142 507.3 345 78.0
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 3.5e-141 505.4 344 75.0
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 3.5e-141 505.4 341 75.4
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 4.6e-141 505.0 343 75.5
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 6.0e-141 504.6 343 75.2
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 1.3e-140 503.4 343 74.6
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 1.9e-139 499.6 345 76.5
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 3.3e-139 498.8 343 74.6
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 9.6e-139 497.3 343 74.1
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 9.6e-139 497.3 343 73.8
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 9.6e-139 497.3 343 73.5
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 9.6e-139 497.3 346 74.3
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 8.1e-138 494.2 343 73.5
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.4e-137 493.4 343 74.1
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 6.9e-137 491.1 348 73.0
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 9.0e-137 490.7 392 67.6
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 2.0e-136 489.6 343 73.2
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 2.0e-136 489.6 343 71.1
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 5.8e-136 488.0 343 72.3
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 1.3e-135 486.9 335 76.1
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 1.3e-135 486.9 343 72.3
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 1.3e-135 486.9 345 73.3
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 2.2e-135 486.1 345 72.2
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 2.2e-135 486.1 345 73.3
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 3.8e-135 485.3 349 71.9
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 8.4e-135 484.2 367 71.4
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 3.2e-134 482.3 325 75.4
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 4.2e-134 481.9 342 75.1
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 7.1e-134 481.1 341 73.3
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 7.1e-134 481.1 343 73.5
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 9.3e-134 480.7 336 70.8
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 2.1e-133 479.6 343 71.1
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 6.0e-133 478.0 356 69.9
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 3.9e-132 475.3 343 71.1
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 6.9e-129 464.5 343 71.1
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 5.0e-127 458.4 272 84.6
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 6.5e-127 458.0 413 61.7
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 8.5e-127 457.6 308 73.4
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.9e-126 456.4 306 75.8
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 4.2e-126 455.3 306 75.5
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 2.7e-125 452.6 336 68.2
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 6.3e-122 441.4 344 65.7
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 4.1e-121 438.7 334 70.4
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 5.9e-120 434.9 306 71.6
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 1.0e-119 434.1 272 79.0
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 8.5e-119 431.0 395 61.0
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 2.1e-117 426.4 343 66.5
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 2.0e-115 419.9 343 65.0
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 2.0e-115 419.9 343 67.1
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 1.4e-113 413.7 293 73.7
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 1.1e-110 404.1 416 55.8
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.2e-109 400.6 343 63.0
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 3.0e-108 396.0 315 69.2
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 4.4e-107 392.1 343 62.1
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 5.3e-105 385.2 292 70.5
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 2.2e-103 379.8 222 86.0
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 6.3e-98 361.7 222 81.5
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 3.5e-96 355.9 343 58.3
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 5.9e-96 355.1 384 52.6
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 7.7e-96 354.8 202 92.1
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 3.0e-92 342.8 246 73.2
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.3e-90 337.4 343 55.7
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.8e-89 333.6 204 84.3
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 2.2e-82 310.1 397 51.1
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 9.2e-81 304.7 335 51.6
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 2.9e-79 299.7 343 50.1
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 6.1e-77 292.0 249 62.2
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 4.4e-75 285.8 169 84.0
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 5.9e-72 275.4 247 59.9
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 6.2e-69 265.4 299 47.5
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 6.8e-60 235.3 255 52.9
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 4.1e-57 226.1 163 75.5
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 9.2e-57 224.9 144 81.9
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 2.6e-51 206.8 144 72.2
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 4.1e-49 199.5 154 64.9
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 4.6e-48 196.1 232 50.4
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 5.2e-44 182.6 358 36.0
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 2.6e-43 180.3 131 71.8
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 3.4e-43 179.9 182 55.5
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 2.9e-42 176.8 110 78.2
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 9.3e-41 171.8 342 33.6
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 8.7e-39 165.2 323 35.3
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 7.3e-38 162.2 312 35.6
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 5.8e-35 152.5 113 73.5
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 1.3e-34 151.4 130 60.8
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 6.4e-26 122.5 74 82.4
Gohir.D07G021800 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.4e-20 104.8 93 57.0
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 4.0e-20 103.2 73 68.5
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 5.3e-20 102.8 104 54.8
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 6.5e-18 95.9 95 57.9


User provided reference genes

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