Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 2.4e-111 407.5 814 100.0
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 1.2e-102 378.6 818 97.1
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 2.6e-102 377.5 814 94.5
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 1.3e-101 375.2 814 96.4
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 5.0e-85 320.1 219 82.2
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 1.6e-83 315.1 216 78.7
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 2.3e-74 284.6 209 74.6
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 6.7e-74 283.1 212 71.7
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 7.7e-62 243.0 207 63.8
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 6.5e-61 240.0 194 68.0
Thhalv10015810m.g Eutrema salsugineum HOM05D007410 ORTHO05D009500 3.4e-41 174.5 98 87.8
AL6G44470 Arabidopsis lyrata HOM05D007410 ORTHO05D009500 1.7e-32 145.6 87 81.6
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 9.5e-28 129.8 150 48.7
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 5.4e-23 114.0 156 44.2
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 5.4e-23 114.0 156 42.3
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 9.2e-23 113.2 156 41.7
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 4.6e-22 110.9 149 41.6
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 1.7e-21 109.0 156 41.7
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 3.9e-21 107.8 211 34.1
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 8.6e-21 106.7 142 42.3
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 7.3e-20 103.6 136 40.4
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 9.5e-20 103.2 155 41.3
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 1.6e-19 102.4 147 40.1
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.6e-19 102.4 155 40.0
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 2.1e-19 102.1 156 37.2
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 3.6e-19 101.3 182 36.8
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 4.7e-19 100.9 155 39.4
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 8.1e-19 100.1 197 34.0
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 8.1e-19 100.1 156 37.2
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.1e-18 99.8 155 38.7
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 3.1e-18 98.2 128 43.8
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 3.1e-18 98.2 156 37.2
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 6.8e-18 97.1 205 35.1
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 2.0e-17 95.5 190 35.8
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 5.8e-17 94.0 178 35.4
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 7.6e-17 93.6 155 38.1
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 7.6e-17 93.6 154 36.4
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 2.2e-16 92.0 153 35.3
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 4.9e-16 90.9 153 35.3
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 1.1e-15 89.7 208 33.7
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 3.2e-15 88.2 152 34.9
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 1.6e-14 85.9 149 34.2
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 2.7e-14 85.1 149 32.9
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 1.0e-13 83.2 130 38.5
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 1.0e-13 83.2 123 39.8
SGA_v2.0_scaffold75G24801 Striga asiatica HOM05D007410 ORTHO05D009500 2.3e-13 82.0 151 32.5
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 3.0e-13 81.6 190 30.0
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 8.7e-13 80.1 152 40.8
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 1.1e-12 79.7 111 45.0
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 1.9e-12 79.0 123 37.4
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 1.9e-12 79.0 150 37.3
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 2.5e-12 78.6 153 35.9
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 2.5e-12 78.6 148 37.2
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 2.5e-12 78.6 178 32.0
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 7.3e-12 77.0 204 30.4
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 2.8e-11 75.1 145 37.2
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 2.8e-11 75.1 140 36.4
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 2.8e-11 75.1 138 34.8
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 1.4e-10 72.8 101 46.5
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 2.4e-10 72.0 133 35.3
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 2.4e-10 72.0 88 48.9
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 3.1e-10 71.6 93 39.8
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 3.1e-10 71.6 101 45.5
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 3.1e-10 71.6 101 45.5
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 5.3e-10 70.9 126 37.3
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 2.6e-09 68.6 155 32.9
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 4.4e-09 67.8 129 33.3
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 4.4e-09 67.8 123 32.5
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 9.9e-09 66.6 128 34.4
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 1.3e-08 66.2 104 34.6
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 2.9e-08 65.1 177 50.3
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 2.9e-08 65.1 183 29.5
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 1.4e-07 62.8 132 35.6
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 3.2e-07 61.6 98 38.8
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 9.3e-07 60.1 121 34.7
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 2.7e-06 58.5 121 33.9
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 2.7e-06 58.5 159 29.6
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 4.6e-06 57.8 121 28.9


User provided reference genes

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