Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 6.5e-105 384.0 190 100.0
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 6.1e-103 377.5 190 98.9
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 1.7e-97 359.4 190 93.2
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 4.3e-88 328.2 191 86.9
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 1.1e-80 303.5 189 81.5
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 1.2e-79 300.1 194 80.9
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 1.5e-77 293.1 194 75.8
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 2.7e-74 282.3 194 75.8
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 5.8e-61 238.0 172 73.8
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 2.0e-53 213.0 193 63.7
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 4.2e-27 125.6 189 41.8
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 2.1e-26 123.2 197 42.1
Sp3g12450 Schrenkiella parvula HOM05D007739 ORTHO05D009838 3.5e-26 122.5 187 43.9
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 1.0e-25 120.9 198 41.4
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 1.3e-25 120.6 197 39.6
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 2.3e-25 119.8 197 43.1
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 3.0e-25 119.4 197 43.1
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 1.5e-24 117.1 197 38.6
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 1.5e-24 117.1 193 40.4
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 1.5e-24 117.1 193 40.4
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 9.7e-24 114.4 196 40.8
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 1.3e-23 114.0 199 40.2
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 1.3e-23 114.0 195 40.5
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 4.8e-23 112.1 193 40.9
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 3.1e-22 109.4 188 41.0
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 6.9e-22 108.2 198 40.9
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 1.5e-21 107.1 193 40.4
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 1.7e-20 103.6 204 37.3
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 2.9e-20 102.8 188 39.9
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 1.9e-19 100.1 167 42.5
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 2.5e-19 99.8 169 41.4
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 9.4e-19 97.8 192 40.1
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 2.1e-18 96.7 189 39.7
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 2.7e-18 96.3 191 39.3
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 6.1e-18 95.1 189 37.6
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 1.4e-17 94.0 190 37.4
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 1.4e-17 94.0 188 40.4
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 5.1e-17 92.0 199 37.2
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 8.8e-17 91.3 189 37.0
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 8.8e-17 91.3 185 35.7
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 1.5e-16 90.5 192 39.1
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 2.0e-16 90.1 157 37.6
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 2.5e-16 89.7 189 35.4
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 2.5e-16 89.7 214 35.5
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 4.3e-16 89.0 202 38.6
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 7.4e-16 88.2 187 34.8
BraA01t03991Z Brassica rapa HOM05D007739 ORTHO05D009838 9.7e-16 87.8 183 38.3
A01p39500 Brassica napus HOM05D007739 ORTHO05D009838 2.8e-15 86.3 183 37.2
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 8.2e-15 84.7 204 35.3
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 2.4e-14 83.2 191 32.5
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 2.4e-14 83.2 196 35.7
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 2.4e-14 83.2 241 30.7
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 5.3e-14 82.0 137 37.2
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 6.9e-14 81.6 183 34.4
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 2.0e-13 80.1 166 38.0
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 2.6e-13 79.7 202 35.1
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 7.7e-13 78.2 220 33.6
Aa31LG8G1440 Aethionema arabicum HOM05D007739 ORTHO05D009838 1.1e-11 74.3 105 42.9
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 1.1e-11 74.3 199 34.7
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 1.1e-11 74.3 186 34.9
PGSC0003DMG400020420 Solanum tuberosum HOM05D007739 ORTHO05D009838 2.5e-11 73.2 194 35.6
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 4.2e-11 72.4 212 32.5
Lsat_1_v5_gn_5_70921 Lactuca sativa HOM05D007739 ORTHO05D009838 1.6e-10 70.5 189 31.7
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 4.7e-10 68.9 199 33.7
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 4.7e-10 68.9 192 33.3
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 6.1e-10 68.6 208 32.7
unitig_578.g16651 Utricularia gibba HOM05D007739 ORTHO05D009838 6.1e-10 68.6 193 33.7
C06p23400 Brassica napus HOM05D007739 ORTHO05D009838 1.3e-07 60.8 104 37.5
BolC6t37514H Brassica oleracea HOM05D007739 ORTHO05D009838 1.3e-07 60.8 104 37.5
BcaC08g44770 Brassica carinata HOM05D007739 ORTHO05D009838 1.7e-07 60.5 104 37.5


User provided reference genes

Program Settings