Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 1.5e-77 292.7 143 100.0
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 1.1e-75 286.6 143 97.9
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 2.1e-55 219.2 108 100.0
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 1.2e-50 203.4 108 92.6
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 1.2e-50 203.4 108 92.6
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 2.0e-50 202.6 108 92.6
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 7.7e-50 200.7 108 91.7
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 7.7e-50 200.7 108 91.7
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 1.0e-49 200.3 108 91.7
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 1.0e-49 200.3 108 91.7
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 1.0e-49 200.3 108 91.7
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 8.5e-49 197.2 108 90.7
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 8.5e-49 197.2 108 90.7
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 8.5e-49 197.2 108 90.7
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 1.1e-48 196.8 108 90.7
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 2.5e-48 195.7 108 89.8
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 3.2e-48 195.3 108 88.9
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 4.2e-48 194.9 108 88.0
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 9.4e-48 193.7 108 88.9
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 9.4e-48 193.7 103 93.2
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 4.0e-46 188.3 108 87.0
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 1.2e-42 176.8 117 80.3
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 1.2e-42 176.8 108 78.7
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 1.2e-39 166.8 101 78.2
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 1.6e-39 166.4 101 78.2
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 3.6e-39 165.2 100 77.0
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 8.0e-39 164.1 101 76.2
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 1.4e-38 163.3 100 80.0
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 1.8e-38 162.9 100 78.0
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 1.8e-38 162.9 100 78.0
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 1.8e-38 162.9 100 76.0
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 2.3e-38 162.5 107 75.7
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 2.3e-38 162.5 102 76.5
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 3.0e-38 162.2 101 75.2
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 4.0e-38 161.8 107 71.0
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 4.0e-38 161.8 102 75.5
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 5.2e-38 161.4 107 72.9
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 1.2e-37 160.2 100 75.0
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 2.0e-37 159.5 110 69.1
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.6e-37 159.1 101 75.2
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 2.6e-37 159.1 120 65.8
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 3.4e-37 158.7 100 75.0
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 5.7e-37 157.9 120 65.0
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 5.7e-37 157.9 101 72.3
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 5.7e-37 157.9 101 72.3
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 9.8e-37 157.1 101 72.3
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 9.8e-37 157.1 104 70.2
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 9.8e-37 157.1 108 70.4
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 9.8e-37 157.1 103 72.8
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 1.3e-36 156.8 105 70.5
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 1.7e-36 156.4 107 70.1
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 1.7e-36 156.4 101 77.2
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.2e-36 156.0 101 72.3
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 8.3e-36 154.1 104 70.2
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.1e-35 153.7 101 73.3
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 1.4e-35 153.3 107 70.1
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 1.4e-35 153.3 116 66.4
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 1.8e-35 152.9 103 71.8
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 2.4e-35 152.5 100 74.0
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 4.1e-35 151.8 101 73.3
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 5.4e-35 151.4 122 63.9
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 5.4e-35 151.4 124 63.7
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 5.4e-35 151.4 103 70.9
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 5.4e-35 151.4 103 70.9
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 5.4e-35 151.4 103 70.9
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 7.0e-35 151.0 109 65.1
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 9.2e-35 150.6 127 59.1
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 9.2e-35 150.6 103 71.8
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 1.2e-34 150.2 101 72.3
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 1.6e-34 149.8 100 71.0
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 1.6e-34 149.8 107 68.2
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 1.6e-34 149.8 101 73.3
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 2.0e-34 149.4 99 70.7
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 3.5e-34 148.7 102 70.6
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 3.5e-34 148.7 102 67.6
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 5.9e-34 147.9 118 63.6
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 1.0e-33 147.1 101 71.3
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 1.3e-33 146.7 101 71.3
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 1.3e-33 146.7 121 60.3
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 1.3e-33 146.7 124 58.9
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 1.7e-33 146.4 107 67.3
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 1.7e-33 146.4 128 59.4
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 2.9e-33 145.6 102 71.6
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 5.0e-33 144.8 95 70.5
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 5.0e-33 144.8 99 69.7
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 5.0e-33 144.8 124 57.3
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 8.6e-33 144.1 117 59.8
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 1.1e-32 143.7 121 59.5
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 3.3e-32 142.1 104 64.4
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 5.6e-32 141.4 115 65.2
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 5.6e-32 141.4 130 58.5
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 7.3e-32 141.0 100 71.0
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 1.6e-31 139.8 115 64.3
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 4.7e-31 138.3 88 73.9
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.8e-30 136.3 129 56.6
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.8e-30 136.3 129 56.6
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 3.0e-30 135.6 87 73.6
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 3.4e-29 132.1 117 59.8
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 3.4e-29 132.1 110 55.5
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 4.4e-29 131.7 87 72.4
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 5.8e-29 131.3 107 60.7
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 9.8e-29 130.6 89 70.8
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 3.2e-27 125.6 101 58.4
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 4.6e-26 121.7 101 59.4
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 6.0e-26 121.3 95 62.1
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 6.0e-26 121.3 104 58.7
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 3.0e-25 119.0 100 62.0
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 6.6e-25 117.9 68 82.4
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 1.5e-24 116.7 200 38.0
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 1.9e-24 116.3 102 56.9
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 2.5e-24 115.9 113 55.8
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 5.6e-24 114.8 110 52.7
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 7.3e-24 114.4 101 58.4
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 6.2e-23 111.3 101 58.4
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 4.0e-22 108.6 70 74.3
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.2e-21 107.1 107 53.3
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 2.6e-21 105.9 74 64.9
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 4.4e-21 105.1 89 59.6
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 1.0e-17 94.0 63 71.4
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 2.3e-17 92.8 81 50.6
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 2.3e-17 92.8 61 72.1
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 3.3e-16 89.0 106 43.4
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 1.6e-15 86.7 79 54.4
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 4.0e-14 82.0 56 69.6
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 7.5e-13 77.8 103 38.8
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 9.9e-13 77.4 45 77.8
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 8.3e-12 74.3 64 50.0
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 3.2e-11 72.4 124 42.7
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 3.9e-09 65.5 76 48.7
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 1.4e-06 57.0 90 35.6


User provided reference genes

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