Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p62380 Brassica napus HOM05D007570 ORTHO05D009365 1.2e-204 717.6 929 100.0
BolC9t59076H Brassica oleracea HOM05D007570 ORTHO05D009365 2.0e-194 683.7 929 97.3
BcaC04g19010 Brassica carinata HOM05D007570 ORTHO05D009365 5.2e-187 659.1 928 96.4
BraA10t44455Z Brassica rapa HOM05D007570 ORTHO05D009365 3.7e-177 626.3 929 94.8
A10p23910 Brassica napus HOM05D007570 ORTHO05D009365 1.6e-172 610.9 929 94.4
BcaB08g36948 Brassica carinata HOM05D007570 ORTHO05D009365 2.3e-171 607.1 936 93.6
Sp6g29270 Schrenkiella parvula HOM05D007570 ORTHO05D009365 1.4e-152 544.7 941 90.1
Thhalv10012597m.g Eutrema salsugineum HOM05D007570 ORTHO05D009365 1.9e-141 507.7 940 86.9
AL6G25570 Arabidopsis lyrata HOM05D007570 ORTHO05D009365 1.6e-140 504.6 941 85.0
Carub.0006s1294 Capsella rubella HOM05D007570 ORTHO05D009365 9.8e-138 495.4 941 86.3
AT5G14770 Arabidopsis thaliana HOM05D007570 ORTHO05D009365 7.8e-135 485.7 941 85.1
CARHR198540 Cardamine hirsuta HOM05D007570 ORTHO05D009365 1.9e-80 305.1 289 69.9
Aa31LG11G14690 Aethionema arabicum HOM05D007570 ORTHO05D009365 6.6e-33 147.1 130 66.9
Aa31LG11G14680 Aethionema arabicum HOM05D007570 ORTHO05D009365 1.5e-24 119.4 113 59.3
Ca_18529_v3 Cicer arietinum L. HOM05D001301 ORTHO05D009365 9.9e-21 106.7 171 40.4
CiPaw.05G211100 Carya illinoinensis HOM05D007570 ORTHO05D009365 1.7e-20 105.9 137 44.5
Psat7g112960 Pisum sativum HOM05D007570 ORTHO05D009365 2.2e-20 105.5 137 43.1
Ciclev10030585m.g Citrus clementina HOM05D007570 ORTHO05D009365 3.7e-20 104.8 188 37.2
Medtr8g064830 Medicago truncatula HOM05D007570 ORTHO05D009365 3.7e-20 104.8 137 43.8
MD03G1142100 Malus domestica HOM05D007570 ORTHO05D009365 6.4e-20 104.0 163 39.9
arahy.Tifrunner.gnm1.ann1.3SI8EE Arachis hypogaea HOM05D000112 ORTHO05D009365 8.3e-20 103.6 353 33.1
arahy.Tifrunner.gnm1.ann1.K3ZWQ5 Arachis hypogaea HOM05D000112 ORTHO05D009365 8.3e-20 103.6 353 33.1
Glyma.07G194900 Glycine max HOM05D007570 ORTHO05D009365 8.3e-20 103.6 162 42.6
Lj4g0005287 Lotus japonicus HOM05D007570 ORTHO05D009365 8.3e-20 103.6 163 42.3
Migut.N02077 Erythranthe guttata HOM05D007570 ORTHO05D009365 1.9e-19 102.4 267 32.2
Medtr4g089005 Medicago truncatula HOM05D007570 ORTHO05D009365 4.1e-19 101.3 172 41.9
VMungo0251G2923 Vigna mungo HOM05D007570 ORTHO05D009365 4.1e-19 101.3 162 42.6
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 9.2e-19 100.1 279 29.4
Thecc.05G226900 Theobroma cacao HOM05D007570 ORTHO05D009365 1.2e-18 99.8 199 37.7
Lalb_Chr16g0383631 Lupinus albus HOM05D007570 ORTHO05D009365 1.6e-18 99.4 176 39.8
Phvul.002G227100 Phaseolus vulgaris HOM05D007570 ORTHO05D009365 1.6e-18 99.4 162 41.4
Atru.chr6.18 Acer truncatum HOM05D007570 ORTHO05D009365 2.1e-18 99.0 137 40.1
MD11G1161200 Malus domestica HOM05D007570 ORTHO05D009365 2.1e-18 99.0 137 41.6
Potri.019G043101 Populus trichocarpa HOM05D007570 ORTHO05D009365 2.1e-18 99.0 184 37.5
Migut.O00416 Erythranthe guttata HOM05D007570 ORTHO05D009365 2.7e-18 98.6 185 35.7
Cc02_g33170 Coffea canephora HOM05D007570 ORTHO05D009365 3.5e-18 98.2 236 32.2
Nitab4.5_0002344g0040 Nicotiana tabacum HOM05D007570 ORTHO05D009365 3.5e-18 98.2 160 36.9
Peaxi162Scf00037g01028 Petunia axillaris HOM05D007570 ORTHO05D009365 4.6e-18 97.8 261 33.0
TPR.G12015 Trifolium pratense HOM05D007570 ORTHO05D009365 7.8e-18 97.1 137 41.6
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 1.3e-17 96.3 141 39.7
CSS0020002 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 1.7e-17 95.9 141 41.1
Duzib106G0838 Durio zibethinus HOM05D007570 ORTHO05D009365 1.7e-17 95.9 182 37.9
CSS0011257 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 3.0e-17 95.1 141 41.8
FAN06G1073 Fragaria x ananassa HOM05D007570 ORTHO05D009365 5.1e-17 94.4 171 36.3
FvH4_7g02371 Fragaria vesca HOM05D007570 ORTHO05D009365 8.6e-17 93.6 170 35.9
Sabra19G0053700 Salix brachista HOM05D007570 ORTHO05D009365 8.6e-17 93.6 176 36.4
CANSAT78G1681 Cannabis sativa HOM05D007570 ORTHO05D009365 1.1e-16 93.2 137 43.1
TWI34G1038 Tripterygium wilfordii HOM05D007570 ORTHO05D009365 1.9e-16 92.4 139 38.8
MSTRG.27980 Avicennia marina HOM05D007570 ORTHO05D009365 3.3e-16 91.7 164 36.6
FAN01G3111 Fragaria x ananassa HOM05D007570 ORTHO05D009365 4.3e-16 91.3 171 36.3
Gohir.A01G216000 Gossypium hirsutum HOM05D007570 ORTHO05D009365 4.3e-16 91.3 182 36.8
Nitab4.5_0008329g0060 Nicotiana tabacum HOM05D001281 ORTHO05D009365 4.3e-16 91.3 142 37.3
Gorai.002G249100 Gossypium raimondii HOM05D007570 ORTHO05D009365 5.6e-16 90.9 182 36.8
Dinv40321 Davidia involucrata HOM05D007570 ORTHO05D009365 2.8e-15 88.6 287 30.7
Gohir.D01G204800 Gossypium hirsutum HOM05D007570 ORTHO05D009365 2.8e-15 88.6 182 36.3
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 1.4e-14 86.3 138 35.5
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 1.4e-14 86.3 138 35.5
Lj5C421G19 Lonicera japonica HOM05D007570 ORTHO05D009365 2.4e-14 85.5 185 33.0
Manes.08G159400 Manihot esculenta HOM05D007570 ORTHO05D009365 2.4e-14 85.5 188 37.8
Eucgr.F03126 Eucalyptus grandis HOM05D007570 ORTHO05D009365 4.0e-14 84.7 140 37.9
PGR031G1904 Punica granatum HOM05D007570 ORTHO05D009365 4.0e-14 84.7 136 33.8
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 2.6e-13 82.0 247 29.6
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 4.4e-13 81.3 247 30.4
Eucgr.A02378 Eucalyptus grandis HOM05D007570 ORTHO05D009365 5.8e-13 80.9 160 35.0
MD11G1161100 Malus domestica HOM05D007570 ORTHO05D009365 1.7e-12 79.3 78 50.0
Actinidia35565 Actinidia chinensis HOM05D007570 ORTHO05D009365 2.9e-12 78.6 106 43.4
Cpa.g.sc909.2 Carica papaya HOM05D007570 ORTHO05D009365 8.4e-12 77.0 71 50.7
Ah.10g033640 Amaranthus hybridus HOM05D007570 ORTHO05D009365 1.4e-11 76.3 273 27.1
Sopen01g043040 Solanum pennellii HOM05D007570 ORTHO05D009365 1.4e-11 76.3 141 34.8
MD00G1202300 Malus domestica HOM05D007570 ORTHO05D009365 1.9e-11 75.9 281 67.3
PGSC0003DMG400024750 Solanum tuberosum HOM05D007570 ORTHO05D009365 2.4e-11 75.5 141 33.3
Cfa016108 Carpinus fangiana HOM05D007570 ORTHO05D009365 5.4e-11 74.3 71 47.9
Hma1.2p1_1374F.1_g278810 Hydrangea macrophylla HOM05D007570 ORTHO05D009365 7.1e-11 73.9 107 41.1
Prupe.2G007100 Prunus persica HOM05D007570 ORTHO05D009365 4.6e-10 71.2 64 53.1
CAN.G665.19 Capsicum annuum HOM05D007570 ORTHO05D009365 1.0e-09 70.1 62 51.6
Nn1g08626 Nelumbo nucifera HOM05D007570 ORTHO05D009365 1.7e-09 69.3 186 31.2
SalBow3G3428 Salvia bowleyana HOM05D007570 ORTHO05D009365 3.9e-09 68.2 98 41.8
RcHm_v2.0_Chr1g0384651 Rosa chinensis HOM05D007570 ORTHO05D009365 9.6e-08 63.5 137 43.8
CsaV3_2G035920 Cucumis sativus L. HOM05D021906 ORTHO05D009365 2.1e-07 62.4 70 45.7
Solyc02g085650.4 Solanum lycopersicum HOM05D001985 ORTHO05D000761 2.1e-07 62.4 147 27.2
Medtr8g463610 Medicago truncatula HOM05D006503 ORTHO05D008116 3.6e-07 61.6 130 32.3
Aqoxy5G04288 Aquilegia oxysepala HOM05D007570 ORTHO05D009365 1.1e-06 60.1 75 42.7
Medtr7g451470 Medicago truncatula HOM05D002737 ORTHO05D009499 1.1e-06 60.1 136 35.3
MELO3C024749.2 Cucumis melo HOM05D021906 ORTHO05D009365 1.4e-06 59.7 70 44.3
Hund19367 Selenicereus undatus HOM05D007570 ORTHO05D009365 1.4e-06 59.7 138 30.4
RcHm_v2.0_Chr1g0326571 Rosa chinensis HOM05D006556 ORTHO05D008146 4.0e-06 58.2 136 28.7
C02p07310 Brassica napus HOM05D007570 ORTHO05D033112 6.9e-06 57.4 43 72.1
BolC2t06662H Brassica oleracea HOM05D007570 ORTHO05D033112 6.9e-06 57.4 43 72.1
BolC2t06664H Brassica oleracea HOM05D007570 ORTHO05D033112 6.9e-06 57.4 43 72.1
Lalb_Chr05g0218081 Lupinus albus HOM05D007101 ORTHO05D008632 6.9e-06 57.4 138 39.9
Zm00001eb191870 Zea mays HOM05D011046 ORTHO05D013342 6.9e-06 57.4 132 31.1


User provided reference genes

Program Settings