Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p61950 Brassica napus HOM05D009607 ORTHO05D009849 3.5e-52 208.0 105 100.0
BcaC04g18975 Brassica carinata HOM05D009607 ORTHO05D009849 1.0e-51 206.5 105 99.0
BolC9t59034H Brassica oleracea HOM05D009607 ORTHO05D009849 1.0e-51 206.5 105 99.0
A10p23660 Brassica napus HOM05D009607 ORTHO05D009849 1.6e-49 199.1 105 96.2
BraA10t44430Z Brassica rapa HOM05D009607 ORTHO05D009849 1.6e-49 199.1 105 96.2
BcaB08g36918 Brassica carinata HOM05D009607 ORTHO05D009849 8.2e-49 196.8 105 94.3
BcaC04g18976 Brassica carinata HOM05D009607 ORTHO05D009849 8.2e-49 196.8 105 94.3
BraA02t05266Z Brassica rapa HOM05D009607 ORTHO05D009849 3.2e-37 158.3 119 73.9
BcaC03g13422 Brassica carinata HOM05D009607 ORTHO05D009849 9.4e-37 156.8 119 73.1
A02p02940 Brassica napus HOM05D009607 ORTHO05D009849 9.4e-37 156.8 119 73.1
C02p07580 Brassica napus HOM05D009607 ORTHO05D009849 9.4e-37 156.8 119 73.1
BolC2t06691H Brassica oleracea HOM05D009607 ORTHO05D009849 9.4e-37 156.8 119 73.1
CARHR198120 Cardamine hirsuta HOM05D009607 ORTHO05D009849 1.6e-36 156.0 113 77.0
Sp6g28880 Schrenkiella parvula HOM05D009607 ORTHO05D009849 2.7e-36 155.2 117 74.4
BolC3t13298H Brassica oleracea HOM05D009607 ORTHO05D009849 3.6e-36 154.8 116 72.4
AL6G26040 Arabidopsis lyrata HOM05D009607 ORTHO05D009849 1.1e-34 149.8 105 80.0
BcaNung03324 Brassica carinata HOM05D009607 ORTHO05D009849 1.1e-34 149.8 122 71.3
AT5G15190 Arabidopsis thaliana HOM05D009607 ORTHO05D009849 2.6e-34 148.7 114 74.6
C03p08000 Brassica napus HOM05D006350 ORTHO05D007850 6.3e-33 144.1 107 73.8
BraA03t10024Z Brassica rapa HOM05D009607 ORTHO05D009849 6.3e-33 144.1 107 73.8
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 4.1e-32 141.4 114 69.3
BcaB01g05071 Brassica carinata HOM05D009607 ORTHO05D009849 1.2e-31 139.8 111 70.3
Thhalv10016066m.g Eutrema salsugineum HOM05D009607 ORTHO05D009849 3.5e-31 138.3 113 69.9
Aa31LG11G14370 Aethionema arabicum HOM05D009607 ORTHO05D009849 3.2e-29 131.7 111 66.7
THA.LOC104821033 Tarenaya hassleriana HOM05D009607 ORTHO05D009849 8.8e-27 123.6 116 62.9
Carub.0006s1337 Capsella rubella HOM05D009607 ORTHO05D009849 1.1e-26 123.2 116 71.6
THA.LOC104822523 Tarenaya hassleriana HOM05D009607 ORTHO05D009849 1.7e-25 119.4 127 55.9
BcaB01g05073 Brassica carinata HOM05D009607 ORTHO05D009849 7.0e-16 87.4 58 79.3
BcaB01g05070 Brassica carinata HOM05D001645 ORTHO05D001749 8.8e-11 70.5 49 77.6
Cpa.g.sc14.11 Carica papaya HOM05D008650 ORTHO05D009849 3.4e-10 68.6 102 46.1
Prupe.3G269200 Prunus persica HOM05D008650 ORTHO05D009849 1.8e-08 62.8 92 43.5
Rhsim10G0040300 Rhododendron simsii HOM05D008650 ORTHO05D009849 3.5e-07 58.5 79 50.6
MD17G1049800 Malus domestica HOM05D008650 ORTHO05D009849 4.5e-07 58.2 94 47.9
COL.COLO4_04788 Corchorus olitorius HOM05D015048 ORTHO05D009849 2.9e-06 55.5 110 40.0
Manes.17G025188 Manihot esculenta HOM05D008650 ORTHO05D009849 5.0e-06 54.7 97 39.2
CANSAT64G2373 Cannabis sativa HOM05D008650 ORTHO05D009849 6.6e-06 54.3 86 43.0
Dinv33746 Davidia involucrata HOM05D008650 ORTHO05D009849 8.6e-06 53.9 91 46.2
MD09G1049600 Malus domestica HOM05D008650 ORTHO05D009849 8.6e-06 53.9 89 40.4


User provided reference genes

Program Settings