Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p61910 Brassica napus HOM05D000425 ORTHO05D030824 2.3e-31 138.3 69 100.0
Sp6g28830 Schrenkiella parvula HOM05D000425 ORTHO05D000373 3.0e-23 111.3 64 85.9
C09p61650 Brassica napus HOM05D000425 ORTHO05D000373 3.9e-23 110.9 64 84.4
BcaNung03318 Brassica carinata HOM05D000425 ORTHO05D000373 6.6e-23 110.2 65 86.2
BcaB08g36914 Brassica carinata HOM05D000425 ORTHO05D000373 8.6e-23 109.8 64 84.4
BcaC03g13418 Brassica carinata HOM05D000425 ORTHO05D000373 1.1e-22 109.4 65 86.2
A02p02980 Brassica napus HOM05D000425 ORTHO05D000373 1.1e-22 109.4 65 86.2
C02p07630 Brassica napus HOM05D000425 ORTHO05D000373 1.1e-22 109.4 65 86.2
BolC2t06695H Brassica oleracea HOM05D000425 ORTHO05D000373 1.1e-22 109.4 65 86.2
BraA02t05269Z Brassica rapa HOM05D000425 ORTHO05D000373 1.1e-22 109.4 65 86.2
Thhalv10013613m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 7.3e-22 106.7 64 82.8
CARHR198070 Cardamine hirsuta HOM05D000425 ORTHO05D000373 1.4e-17 92.4 64 78.1
AL6G26100 Arabidopsis lyrata HOM05D000425 ORTHO05D000373 7.1e-17 90.1 64 73.4
AT5G15240 Arabidopsis thaliana HOM05D000425 ORTHO05D000373 2.1e-16 88.6 64 73.4
Carub.0006s1342 Capsella rubella HOM05D000425 ORTHO05D000373 8.7e-15 83.2 66 74.2
Aa31LG11G14300 Aethionema arabicum HOM05D000425 ORTHO05D000373 3.4e-11 71.2 66 66.7
PSO017G0766 Papaver somniferum HOM05D000425 ORTHO05D000373 6.0e-08 60.5 64 57.8
THA.LOC104822358 Tarenaya hassleriana HOM05D000425 ORTHO05D000373 5.1e-07 57.4 64 54.7
Actinidia26222 Actinidia chinensis HOM05D000425 ORTHO05D000373 5.6e-06 53.9 35 68.6
Actinidia37033 Actinidia chinensis HOM05D000425 ORTHO05D030824 5.6e-06 53.9 35 68.6
CANSAT64G1534 Cannabis sativa HOM05D000425 ORTHO05D000373 7.4e-06 53.5 45 62.2
Nitab4.5_0000118g0120 Nicotiana tabacum HOM05D000425 ORTHO05D000373 7.4e-06 53.5 47 63.8
unitig_21.g20927 Utricularia gibba HOM05D000425 ORTHO05D000373 7.4e-06 53.5 32 84.4
vmacro05691 Vaccinium macrocarpon HOM05D000425 ORTHO05D000373 7.4e-06 53.5 32 78.1
Glyma.18G059300 Glycine max HOM05D000425 ORTHO05D000373 9.6e-06 53.1 30 83.3
VMungo0540G0236 Vigna mungo HOM05D000425 ORTHO05D000373 9.6e-06 53.1 46 56.5


User provided reference genes

Program Settings