Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 1.6e-92 342.8 184 100.0
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 1.6e-92 342.8 184 100.0
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 9.0e-59 230.7 176 79.5
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 7.6e-58 227.6 176 79.0
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 1.7e-57 226.5 176 78.4
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 1.7e-57 226.5 176 78.4
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 1.7e-57 226.5 176 77.8
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 8.1e-52 207.6 173 73.4
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 1.9e-48 196.4 174 69.0
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 4.6e-47 191.8 173 65.9
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 4.8e-44 181.8 173 63.6
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 3.1e-43 179.1 174 65.5
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 3.5e-39 165.6 171 60.8
BcaB01g02390 Brassica carinata HOM05D005433 ORTHO05D006675 3.9e-38 162.2 184 57.6
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 5.7e-37 158.3 169 58.6
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 4.2e-32 142.1 162 56.8
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 4.6e-31 138.7 145 58.6
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 4.6e-31 138.7 145 58.6
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 4.6e-31 138.7 145 58.6
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 1.0e-30 137.5 145 59.3
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 5.1e-30 135.2 163 52.8
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 8.7e-30 134.4 162 55.6
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 8.7e-30 134.4 142 59.9
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 1.5e-29 133.7 168 52.4
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 1.5e-29 133.7 157 53.5
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 1.9e-29 133.3 168 51.8
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 4.3e-29 132.1 161 53.4
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 5.7e-29 131.7 165 53.9
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 7.4e-29 131.3 171 53.2
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 9.7e-29 131.0 171 51.5
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 9.7e-29 131.0 179 53.1
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 1.6e-28 130.2 135 57.8
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 1.6e-28 130.2 181 50.3
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 2.2e-28 129.8 162 53.1
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 2.2e-28 129.8 164 52.4
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 2.8e-28 129.4 166 51.8
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 3.7e-28 129.0 174 47.7
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 4.8e-28 128.6 134 58.2
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 4.8e-28 128.6 137 58.4
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 6.3e-28 128.3 163 52.8
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 6.3e-28 128.3 134 59.0
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 8.2e-28 127.9 137 57.7
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 1.1e-27 127.5 155 52.3
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 1.1e-27 127.5 157 52.2
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 1.4e-27 127.1 168 49.4
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 1.4e-27 127.1 168 49.4
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 1.4e-27 127.1 157 54.1
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 1.8e-27 126.7 134 58.2
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 2.4e-27 126.3 168 51.2
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 2.4e-27 126.3 183 46.4
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 3.1e-27 125.9 144 56.2
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 3.1e-27 125.9 171 49.7
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 3.1e-27 125.9 168 49.4
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 4.1e-27 125.6 164 51.2
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 5.3e-27 125.2 167 52.1
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 5.3e-27 125.2 157 51.6
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 9.0e-27 124.4 132 57.6
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 1.2e-26 124.0 157 50.3
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 1.5e-26 123.6 164 50.6
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 1.5e-26 123.6 166 48.8
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 2.0e-26 123.2 146 56.2
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 2.0e-26 123.2 168 47.6
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 3.4e-26 122.5 134 53.7
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 5.9e-26 121.7 166 49.4
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 7.7e-26 121.3 131 61.8
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 1.3e-25 120.6 159 50.3
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 1.3e-25 120.6 159 49.7
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.2e-25 119.8 166 51.2
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 2.9e-25 119.4 134 53.7
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 3.8e-25 119.0 166 50.6
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 6.5e-25 118.2 165 50.9
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 6.5e-25 118.2 168 50.0
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 6.5e-25 118.2 132 56.1
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 8.5e-25 117.9 146 52.7
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 1.1e-24 117.5 134 59.0
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 1.1e-24 117.5 142 52.8
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 1.1e-24 117.5 148 53.4
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 1.1e-24 117.5 141 51.8
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 5.5e-24 115.2 162 48.8
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 5.5e-24 115.2 164 50.6
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 5.5e-24 115.2 134 56.7
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 9.4e-24 114.4 165 48.5
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 1.6e-23 113.6 158 50.6
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 1.6e-23 113.6 164 47.0
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 7.9e-23 111.3 172 44.8
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 2.3e-22 109.8 165 47.3
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 2.3e-22 109.8 165 47.3
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 2.3e-22 109.8 176 47.2
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 3.9e-22 109.0 102 63.7
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 3.9e-22 109.0 164 48.8
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 8.8e-22 107.8 164 48.2
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 1.1e-21 107.5 138 52.2
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 1.5e-21 107.1 134 51.5
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 3.3e-21 105.9 164 47.6
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 1.3e-20 104.0 164 44.5
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 1.7e-20 103.6 134 50.0
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 1.7e-20 103.6 134 50.0
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 3.7e-20 102.4 134 51.5
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 6.3e-20 101.7 174 46.6
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 1.1e-19 100.9 163 44.8
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 4.1e-19 99.0 143 48.3
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 4.5e-18 95.5 105 55.2
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 1.3e-17 94.0 113 54.0
Lsat_1_v5_gn_0_4360 Lactuca sativa HOM05D005433 ORTHO05D006675 1.3e-17 94.0 119 52.9
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 3.8e-17 92.4 133 49.6
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 1.1e-16 90.9 117 51.3
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.4e-16 90.5 123 48.8
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 5.5e-16 88.6 141 46.1
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 7.9e-15 84.7 107 49.5
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 3.9e-14 82.4 111 50.5
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 5.1e-14 82.0 149 37.6
CARHR090080 Cardamine hirsuta HOM05D005433 ORTHO05D006675 4.4e-13 79.0 72 63.9
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 4.4e-13 79.0 117 47.0
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 1.8e-11 73.6 70 61.4
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 2.4e-11 73.2 150 39.3
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 2.4e-11 73.2 100 50.0
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 5.3e-11 72.0 85 51.8
EL10Ac5g11588 Beta vulgaris HOM05D005433 ORTHO05D006675 7.7e-10 68.2 71 59.2
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 1.0e-09 67.8 109 41.3
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 1.7e-09 67.0 99 43.4
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 2.2e-09 66.6 146 34.2
Oeu051093.1 Olea europaea HOM05D005433 ORTHO05D006675 3.8e-09 65.9 147 38.1
Oeu055126.1 Olea europaea HOM05D005433 ORTHO05D006675 3.2e-08 62.8 83 51.8
EL10Ac1g01129 Beta vulgaris HOM05D005433 ORTHO05D006675 2.3e-06 56.6 35 82.9
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 6.7e-06 55.1 41 68.3


User provided reference genes

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