Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p61150 Brassica napus HOM05D005714 ORTHO05D006812 1.5e-53 212.6 109 100.0
BcaC04g18926 Brassica carinata HOM05D005714 ORTHO05D006812 8.0e-47 190.3 99 99.0
BraA10t44382Z Brassica rapa HOM05D005714 ORTHO05D006812 8.8e-46 186.8 101 95.0
Sp6g28230 Schrenkiella parvula HOM05D005714 ORTHO05D006812 1.5e-45 186.0 101 94.1
Thhalv10015850m.g Eutrema salsugineum HOM05D005714 ORTHO05D006812 9.7e-45 183.3 100 93.0
BolC3t13356H Brassica oleracea HOM05D005714 ORTHO05D006812 1.3e-44 183.0 101 93.1
Carub.0006s1407 Capsella rubella HOM05D005714 ORTHO05D006812 1.1e-43 179.9 101 90.1
C03p08510 Brassica napus HOM05D005714 ORTHO05D006812 1.4e-43 179.5 101 92.1
BraA03t10072Z Brassica rapa HOM05D005714 ORTHO05D006812 1.4e-43 179.5 102 93.1
CARHR197420 Cardamine hirsuta HOM05D005714 ORTHO05D006812 1.4e-43 179.5 101 91.1
C03p08640 Brassica napus HOM05D005714 ORTHO05D006812 1.8e-43 179.1 101 93.1
BolC3t13366H Brassica oleracea HOM05D005714 ORTHO05D006812 1.8e-43 179.1 101 93.1
BcaB08g36870 Brassica carinata HOM05D005714 ORTHO05D006812 2.4e-43 178.7 101 91.1
BolC9t58957H Brassica oleracea HOM05D005714 ORTHO05D006812 3.1e-43 178.3 101 94.1
BcaB01g05015 Brassica carinata HOM05D005714 ORTHO05D006812 1.2e-42 176.4 99 90.9
BraA03t10075Z Brassica rapa HOM05D005714 ORTHO05D006812 4.5e-42 174.5 102 92.2
A03p07460 Brassica napus HOM05D005714 ORTHO05D006812 5.0e-41 171.0 102 91.2
AL6G26770 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 1.5e-40 169.5 101 89.1
AL6G26782 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 1.5e-40 169.5 101 89.1
AT5G15880 Arabidopsis thaliana HOM05D005714 ORTHO05D006812 2.5e-40 168.7 101 87.1
Aa31LG11G13710 Aethionema arabicum HOM05D005714 ORTHO05D006812 1.2e-39 166.4 101 83.2
THA.LOC104802994 Tarenaya hassleriana HOM05D005714 ORTHO05D006812 1.4e-38 162.9 101 83.2
A10p17320 Brassica napus HOM05D000327 ORTHO05D006812 9.7e-37 156.8 100 81.0
BcaB07g33635 Brassica carinata HOM05D005714 ORTHO05D006812 8.8e-30 133.7 88 77.3
Gohir.D11G174600 Gossypium hirsutum HOM05D005714 ORTHO05D006812 2.7e-26 122.1 101 65.3
Gorai.007G187100 Gossypium raimondii HOM05D005714 ORTHO05D006812 4.5e-26 121.3 101 65.3
COL.COLO4_03920 Corchorus olitorius HOM05D005714 ORTHO05D006812 2.3e-25 119.0 100 66.0
Thecc.04G144400 Theobroma cacao HOM05D005714 ORTHO05D006812 2.9e-25 118.6 101 64.4
Lalb_Chr21g0317991 Lupinus albus HOM05D005714 ORTHO05D006812 8.6e-25 117.1 101 65.3
Glyma.19G041200 Glycine max HOM05D005714 ORTHO05D006812 1.1e-24 116.7 102 66.7
Nn3g17645 Nelumbo nucifera HOM05D005714 ORTHO05D006812 3.3e-24 115.2 100 64.0
Potri.017G110300 Populus trichocarpa HOM05D005714 ORTHO05D006812 3.3e-24 115.2 102 65.7
ECA232G3066 Erigeron canadensis HOM05D005714 ORTHO05D006812 9.5e-24 113.6 102 66.7
Manes.02G065100 Manihot esculenta HOM05D005714 ORTHO05D006812 9.5e-24 113.6 100 65.0
Potri.004G105400 Populus trichocarpa HOM05D005714 ORTHO05D006812 1.6e-23 112.8 110 60.0
FAN09G3422 Fragaria x ananassa HOM05D005714 ORTHO05D006812 2.8e-23 112.1 103 63.1
Dinv33913 Davidia involucrata HOM05D005714 ORTHO05D006812 3.6e-23 111.7 102 60.8
Sabra04G0076700 Salix brachista HOM05D005714 ORTHO05D006812 3.6e-23 111.7 110 60.0
FvH4_6g45610 Fragaria vesca HOM05D005714 ORTHO05D006812 4.7e-23 111.3 102 64.7
Phvul.004G049100 Phaseolus vulgaris HOM05D005714 ORTHO05D006812 4.7e-23 111.3 102 61.8
Sed0016830 Sechium edule HOM05D005714 ORTHO05D006812 6.1e-23 110.9 101 63.4
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 1.4e-22 109.8 101 64.4
Sabra17G0092200 Salix brachista HOM05D005714 ORTHO05D006812 1.4e-22 109.8 101 63.4
ClCG05G011990 Citrullus lanatus HOM05D005714 ORTHO05D006812 1.8e-22 109.4 101 61.4
MELO3C023776.2 Cucumis melo HOM05D005714 ORTHO05D006812 2.3e-22 109.0 101 60.4
Lj7A8G44 Lonicera japonica HOM05D005714 ORTHO05D006812 4.0e-22 108.2 102 63.7
RcHm_v2.0_Chr2g0163761 Rosa chinensis HOM05D005714 ORTHO05D006812 6.8e-22 107.5 102 62.7
Rhsim10G0064900 Rhododendron simsii HOM05D005714 ORTHO05D006812 1.2e-21 106.7 101 61.4
Medtr6g016870 Medicago truncatula HOM05D005714 ORTHO05D006812 2.0e-21 105.9 100 60.0
MSTRG.2945 Avicennia marina HOM05D005714 ORTHO05D006812 2.6e-21 105.5 102 59.8
CsaV3_3G020470 Cucumis sativus L. HOM05D005714 ORTHO05D006812 2.6e-21 105.5 101 60.4
Oeu032870.1 Olea europaea HOM05D005714 ORTHO05D006812 2.6e-21 105.5 102 58.8
CSS0016024 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 4.4e-21 104.8 102 61.8
CSS0020756 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 4.4e-21 104.8 102 61.8
CANSAT64G2721 Cannabis sativa HOM05D005714 ORTHO05D006812 5.7e-21 104.4 101 58.4
Cpa.g.sc179.47 Carica papaya HOM05D005714 ORTHO05D006812 1.3e-20 103.2 101 56.4
Cfa007977 Carpinus fangiana HOM05D001801 ORTHO05D001739 1.7e-20 102.8 102 59.8
CSS0044543 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 2.2e-20 102.4 102 58.8
CSS0047938 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 2.2e-20 102.4 102 58.8
CiPaw.03G006400 Carya illinoinensis HOM05D005714 ORTHO05D006812 2.8e-20 102.1 102 58.8
TWI74G1644 Tripterygium wilfordii HOM05D005714 ORTHO05D006812 3.7e-20 101.7 101 61.4
Prupe.3G242300 Prunus persica HOM05D005714 ORTHO05D006812 4.9e-20 101.3 102 60.8
Sc10g0001430 Simmondsia chinensis HOM05D005714 ORTHO05D006812 4.9e-20 101.3 102 55.9
Atru.BG.225.p Acer truncatum HOM05D005714 ORTHO05D006812 6.3e-20 100.9 103 59.2
MD09G1081200 Malus domestica HOM05D005714 ORTHO05D006812 8.3e-20 100.5 102 59.8
Peaxi162Scf00479g00037 Petunia axillaris HOM05D005714 ORTHO05D006812 1.1e-19 100.1 102 58.8
Actinidia18116 Actinidia chinensis HOM05D005714 ORTHO05D006812 2.4e-19 99.0 102 57.8
MD17G1072600 Malus domestica HOM05D005714 ORTHO05D006812 3.1e-19 98.6 102 59.8
Cfa007975 Carpinus fangiana HOM05D005714 ORTHO05D006812 4.1e-19 98.2 102 56.9
Migut.H00540 Erythranthe guttata HOM05D005714 ORTHO05D006812 4.1e-19 98.2 102 56.9
Actinidia36301 Actinidia chinensis HOM05D005714 ORTHO05D006812 5.4e-19 97.8 102 56.9
vmacro05584 Vaccinium macrocarpon HOM05D005714 ORTHO05D006812 5.4e-19 97.8 101 57.4
Nitab4.5_0000612g0140 Nicotiana tabacum HOM05D005714 ORTHO05D006812 7.0e-19 97.4 102 57.8
PGSC0003DMG400018763 Solanum tuberosum HOM05D005714 ORTHO05D006812 7.0e-19 97.4 102 56.9
SGA_v2.0_scaffold204G41660 Striga asiatica HOM05D005714 ORTHO05D006812 7.0e-19 97.4 101 57.4
SalBow1G2935 Salvia bowleyana HOM05D005714 ORTHO05D006812 1.2e-18 96.7 101 55.4
SalBow1G3421 Salvia bowleyana HOM05D005714 ORTHO05D006812 1.2e-18 96.7 101 55.4
EL10Ac2g04627 Beta vulgaris HOM05D005714 ORTHO05D006812 2.7e-18 95.5 101 50.5
GSVIVG01036468001 Vitis vinifera HOM05D005714 ORTHO05D006812 3.5e-18 95.1 101 55.4
BcaB01g04945 Brassica carinata HOM05D004183 ORTHO05D005022 7.8e-18 94.0 105 58.1
Duzib138G1804 Durio zibethinus HOM05D005714 ORTHO05D006812 2.3e-17 92.4 100 54.0
Hund16108 Selenicereus undatus HOM05D005714 ORTHO05D006812 5.0e-17 91.3 101 53.5
HanXRQChr15g0490211 Helianthus annuus HOM05D005714 ORTHO05D006812 1.1e-16 90.1 109 51.4
Aqoxy3G03832 Aquilegia oxysepala HOM05D005714 ORTHO05D006812 3.3e-16 88.6 101 52.5
Cc07_g04960 Coffea canephora HOM05D005714 ORTHO05D006812 7.3e-16 87.4 103 56.3
Eucgr.J01456 Eucalyptus grandis HOM05D005714 ORTHO05D006812 7.3e-16 87.4 102 53.9
Nitab4.5_0003161g0010 Nicotiana tabacum HOM05D005714 ORTHO05D006812 2.1e-15 85.9 94 53.2
Lj2g0024465 Lotus japonicus HOM05D005714 ORTHO05D006812 4.7e-15 84.7 80 60.0
PGR042G2576 Punica granatum HOM05D005714 ORTHO05D006812 8.0e-15 84.0 102 53.9
PSO063G3590 Papaver somniferum HOM05D005714 ORTHO05D006812 1.8e-14 82.8 102 53.9
Os09g0108400 Oryza sativa ssp. japonica HOM05D005714 ORTHO05D006812 6.8e-14 80.9 99 48.5
arahy.Tifrunner.gnm1.ann1.AEQW57 Arachis hypogaea HOM05D005714 ORTHO05D006812 1.5e-13 79.7 79 59.5
arahy.Tifrunner.gnm1.ann1.R8VTVZ Arachis hypogaea HOM05D005714 ORTHO05D006812 1.5e-13 79.7 79 59.5
MBI15_g36941_MAGBIO Magnolia biondii HOM05D005714 ORTHO05D006812 1.5e-13 79.7 102 52.0
BolC3t18733H Brassica oleracea HOM05D005714 ORTHO05D006812 2.6e-13 79.0 45 84.4
VMungo0464G1377 Vigna mungo HOM05D005714 ORTHO05D006812 2.6e-13 79.0 81 54.3
CDE02G2817 Ceratophyllum demersum HOM05D005714 ORTHO05D006812 3.4e-13 78.6 101 48.5
unitig_899.g15126 Utricularia gibba HOM05D005714 ORTHO05D006812 4.4e-13 78.2 101 47.5
QL02p053457 Quercus lobata HOM05D005714 ORTHO05D006812 7.5e-13 77.4 76 57.9
AUR62014554 Chenopodium quinoa HOM05D005714 ORTHO05D006812 9.8e-13 77.0 90 46.7
AUR62008947 Chenopodium quinoa HOM05D005714 ORTHO05D006812 1.3e-12 76.6 89 47.2
TPR.G9671 Trifolium pratense HOM05D005714 ORTHO05D006812 2.2e-12 75.9 82 58.5
CAN.G551.30 Capsicum annuum HOM05D005714 ORTHO05D006812 8.3e-12 73.9 101 48.5
Ah.10g037360 Amaranthus hybridus HOM05D005714 ORTHO05D006812 1.4e-11 73.2 90 44.4
RcHm_v2.0_Chr2g0163621 Rosa chinensis HOM05D005714 ORTHO05D006812 1.4e-11 73.2 88 55.7
HPP92_027404 Vanilla planifolia HOM05D005714 ORTHO05D006812 3.2e-11 72.0 101 47.5
RcHm_v2.0_Chr2g0163721 Rosa chinensis HOM05D005714 ORTHO05D006812 3.5e-10 68.6 49 69.4
PSO782G2399 Papaver somniferum HOM05D005714 ORTHO05D006812 2.5e-08 62.4 89 48.3
Lsat_1_v5_gn_4_175801 Lactuca sativa HOM05D005714 ORTHO05D006812 1.2e-07 60.1 45 68.9
ATR0752G036 Amborella trichopoda HOM05D005714 ORTHO05D006812 1.4e-06 56.6 118 40.7
RcHm_v2.0_Chr2g0163711 Rosa chinensis HOM05D005714 ORTHO05D006812 8.9e-06 53.9 44 63.6


User provided reference genes

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