Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 4.1e-47 191.0 96 100.0
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 4.1e-47 191.0 96 100.0
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 4.1e-47 191.0 96 100.0
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 5.4e-47 190.7 96 99.0
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 5.4e-47 190.7 96 99.0
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 1.1e-44 183.0 94 94.7
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 1.9e-44 182.2 95 94.7
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 9.5e-44 179.9 94 94.7
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 2.1e-43 178.7 93 93.5
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 3.6e-43 177.9 94 92.6
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 8.0e-43 176.8 93 92.5
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 8.0e-43 176.8 93 92.5
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.0e-42 174.5 94 88.3
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 8.6e-37 156.8 90 84.4
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.5e-36 156.0 90 85.6
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 9.5e-36 153.3 89 80.9
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 1.0e-34 149.8 86 80.2
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 1.4e-34 149.4 87 81.6
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 1.4e-34 149.4 91 76.9
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 2.3e-34 148.7 85 83.5
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 2.3e-34 148.7 86 80.2
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 3.1e-34 148.3 89 78.7
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 5.2e-34 147.5 92 75.0
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 5.2e-34 147.5 89 79.8
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 6.8e-34 147.1 89 78.7
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 6.8e-34 147.1 88 79.5
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 8.9e-34 146.7 85 82.4
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 8.9e-34 146.7 92 76.1
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 8.9e-34 146.7 89 78.7
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 1.2e-33 146.4 90 78.9
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 1.5e-33 146.0 89 78.7
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 1.5e-33 146.0 86 81.4
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 1.5e-33 146.0 86 79.1
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 2.0e-33 145.6 86 79.1
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 4.4e-33 144.4 89 76.4
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 4.4e-33 144.4 89 78.7
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 5.8e-33 144.1 85 78.8
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 5.8e-33 144.1 86 77.9
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 5.8e-33 144.1 89 77.5
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 5.8e-33 144.1 89 76.4
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 5.8e-33 144.1 89 76.4
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 5.8e-33 144.1 86 80.2
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 5.8e-33 144.1 90 74.4
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 7.5e-33 143.7 88 79.5
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 9.8e-33 143.3 86 77.9
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 2.2e-32 142.1 89 76.4
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 3.7e-32 141.4 89 77.5
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 3.7e-32 141.4 83 81.9
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 3.7e-32 141.4 86 79.1
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 3.7e-32 141.4 86 75.6
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 3.7e-32 141.4 86 77.9
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 6.4e-32 140.6 75 86.7
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 6.4e-32 140.6 89 75.3
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 6.4e-32 140.6 86 76.7
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 6.4e-32 140.6 83 79.5
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 8.3e-32 140.2 91 72.5
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 1.1e-31 139.8 94 72.3
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 1.1e-31 139.8 86 76.7
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 1.4e-31 139.4 86 75.6
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 1.4e-31 139.4 86 74.4
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.4e-31 139.4 86 74.4
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.4e-31 139.4 86 74.4
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 1.4e-31 139.4 87 74.7
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 1.4e-31 139.4 86 74.4
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 1.9e-31 139.0 89 73.0
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 1.9e-31 139.0 94 73.4
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 1.9e-31 139.0 88 72.7
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 1.9e-31 139.0 88 77.3
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 2.4e-31 138.7 83 78.3
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 5.4e-31 137.5 86 74.4
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 7.0e-31 137.1 86 74.4
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 1.6e-30 136.0 89 71.9
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 1.6e-30 136.0 89 74.2
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 2.0e-30 135.6 86 74.4
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 3.5e-30 134.8 84 76.2
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 3.5e-30 134.8 80 77.5
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 3.5e-30 134.8 86 72.1
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 4.6e-30 134.4 86 73.3
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 4.6e-30 134.4 87 75.9
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 1.3e-29 132.9 82 76.8
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 1.7e-29 132.5 68 94.1
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 3.0e-29 131.7 84 75.0
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 5.0e-29 131.0 97 66.0
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 1.6e-27 125.9 124 55.6
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 2.1e-27 125.6 98 62.2
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.1e-26 123.2 91 67.0
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 3.4e-25 118.2 79 70.9
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 3.4e-25 118.2 79 70.9
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 4.4e-25 117.9 66 84.8
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 7.5e-25 117.1 67 82.1
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 9.8e-25 116.7 138 49.3
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 1.3e-24 116.3 65 81.5
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.3e-24 116.3 69 78.3
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 2.2e-24 115.5 75 72.0
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 3.7e-24 114.8 69 73.9
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.4e-23 112.8 66 81.8
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 1.4e-23 112.8 68 77.9
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 5.4e-23 110.9 69 73.9
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 1.2e-22 109.8 79 60.8
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 1.6e-22 109.4 68 73.5
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 1.3e-21 106.3 64 79.7
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 1.3e-21 106.3 85 60.0
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 1.7e-21 105.9 62 75.8
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 3.0e-21 105.1 65 73.8
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 8.6e-21 103.6 77 63.6
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 1.1e-18 96.7 65 66.2
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 3.9e-13 78.2 45 75.6
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 8.6e-13 77.0 65 60.0
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 3.1e-10 68.6 86 46.5
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 3.1e-10 68.6 70 50.0
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 8.9e-10 67.0 71 45.1


User provided reference genes

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