Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p60050 Brassica napus HOM05D004299 ORTHO05D032718 6.2e-116 421.0 243 100.0
BolC9t58840H Brassica oleracea HOM05D004299 ORTHO05D032718 8.3e-113 410.6 248 92.7
BcaC04g18830 Brassica carinata HOM05D004299 ORTHO05D032718 9.0e-75 284.3 257 67.7
Sp6g27070 Schrenkiella parvula HOM05D004299 ORTHO05D003557 2.8e-60 236.1 304 54.6
BcaB08g36802 Brassica carinata HOM05D004299 ORTHO05D003557 2.3e-46 189.9 274 51.1
BraA03t10142Z Brassica rapa HOM05D004299 ORTHO05D003557 1.8e-43 180.3 243 53.5
BcaB01g05216 Brassica carinata HOM05D004299 ORTHO05D003557 3.5e-42 176.0 244 52.9
BcaC01g02808 Brassica carinata HOM05D004299 ORTHO05D003557 3.2e-40 169.5 273 47.3
C02p08770 Brassica napus HOM05D004299 ORTHO05D003557 3.2e-40 169.5 241 50.6
BolC3t13447H Brassica oleracea HOM05D004299 ORTHO05D003557 3.2e-40 169.5 250 51.6
C03p60050 Brassica napus HOM05D004299 ORTHO05D003557 3.6e-39 166.0 265 47.9
BcaB01g04949 Brassica carinata HOM05D004299 ORTHO05D003557 4.8e-36 155.6 244 50.0
A03p08220 Brassica napus HOM05D004299 ORTHO05D003557 3.1e-35 152.9 244 50.8
BcaC03g18533 Brassica carinata HOM05D004299 ORTHO05D003557 1.1e-32 144.4 290 42.4
BolC2t06791H Brassica oleracea HOM05D004299 ORTHO05D003557 1.0e-30 137.9 241 45.6
A02p03950 Brassica napus HOM05D004299 ORTHO05D003557 7.0e-27 125.2 276 39.5
BraA02t05360Z Brassica rapa HOM05D004299 ORTHO05D003557 2.0e-26 123.6 303 37.0
AT5G17160 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 8.0e-23 111.7 298 39.6
Thhalv10013127m.g Eutrema salsugineum HOM05D004299 ORTHO05D003557 3.5e-18 96.3 255 37.6
Carub.0006s1534 Capsella rubella HOM05D004299 ORTHO05D003557 1.3e-17 94.4 230 41.3
AL6G28200 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 3.1e-14 83.2 295 35.3
CARHR196070 Cardamine hirsuta HOM05D004299 ORTHO05D003557 6.6e-09 65.5 118 44.9
C03p09520 Brassica napus HOM05D004299 ORTHO05D003557 8.0e-07 58.5 96 43.8
A10p22240 Brassica napus HOM05D004299 ORTHO05D003557 8.9e-06 55.1 33 87.9
BraA10t44283Z Brassica rapa HOM05D004299 ORTHO05D003557 8.9e-06 55.1 33 87.9


User provided reference genes

Program Settings