Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p59800 Brassica napus HOM05D009029 ORTHO05D009596 1.8e-80 302.4 136 100.0
BcaC04g18801 Brassica carinata HOM05D009029 ORTHO05D009596 1.2e-71 273.1 146 86.3
BcaB08g36781 Brassica carinata HOM05D009029 ORTHO05D009596 3.3e-58 228.4 165 67.9
BcaB05g23261 Brassica carinata HOM05D009029 ORTHO05D009596 1.7e-51 206.1 166 63.3
BcaC03g18552 Brassica carinata HOM05D009029 ORTHO05D009596 2.5e-50 202.2 166 61.4
A02p04140 Brassica napus HOM05D009029 ORTHO05D009596 2.5e-50 202.2 166 61.4
C02p08990 Brassica napus HOM05D009029 ORTHO05D009596 2.5e-50 202.2 166 61.4
BolC2t06808H Brassica oleracea HOM05D009029 ORTHO05D009596 2.5e-50 202.2 166 61.4
BraA02t05377Z Brassica rapa HOM05D009029 ORTHO05D009596 5.6e-50 201.1 166 60.8
Sp6g26880 Schrenkiella parvula HOM05D009029 ORTHO05D009596 9.6e-50 200.3 156 61.5
Thhalv10014860m.g Eutrema salsugineum HOM05D009029 ORTHO05D009596 1.3e-46 189.9 171 56.7
CARHR195870 Cardamine hirsuta HOM05D009029 ORTHO05D009596 3.2e-45 185.3 167 57.5
Carub.0006s1555 Capsella rubella HOM05D009029 ORTHO05D009596 2.3e-43 179.1 168 57.7
AL6G28410 Arabidopsis lyrata HOM05D009029 ORTHO05D009596 3.0e-43 178.7 167 58.1
AT5G17340 Arabidopsis thaliana HOM05D009029 ORTHO05D009596 1.3e-41 173.3 167 56.9
Carub.0006s1554 Capsella rubella HOM05D009029 ORTHO05D009596 1.1e-26 123.6 165 46.1
A10p22070 Brassica napus HOM05D009029 ORTHO05D009596 6.5e-22 107.8 164 40.2
BolC1t01146H Brassica oleracea HOM05D009029 ORTHO05D009596 3.2e-21 105.5 164 40.2
BcaC09g51570 Brassica carinata HOM05D009029 ORTHO05D009596 9.4e-21 104.0 168 39.9
C09p59840 Brassica napus HOM05D009029 ORTHO05D009596 9.4e-21 104.0 163 39.9
BcaC04g18803 Brassica carinata HOM05D009029 ORTHO05D009596 1.2e-20 103.6 162 40.1
C09p59860 Brassica napus HOM05D009029 ORTHO05D009596 3.9e-19 98.6 164 38.4
BraA10t44265Z Brassica rapa HOM05D009029 ORTHO05D009596 3.9e-19 98.6 82 59.8
BraA10t44266Z Brassica rapa HOM05D009029 ORTHO05D009596 3.9e-19 98.6 161 38.5
BcaB08g36782 Brassica carinata HOM05D009029 ORTHO05D009596 5.1e-19 98.2 164 38.4
BolC9t58822H Brassica oleracea HOM05D009029 ORTHO05D009596 2.9e-14 82.4 149 36.2
CARHR195880 Cardamine hirsuta HOM05D009029 ORTHO05D009596 2.5e-13 79.3 109 42.2
THA.LOC104827231 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 3.0e-11 72.4 165 32.7
Thhalv10015780m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 3.3e-10 68.9 149 32.9
Aa31LG11G12340 Aethionema arabicum HOM05D009029 ORTHO05D009596 2.8e-09 65.9 178 29.8
SpUn0004_0070 Schrenkiella parvula HOM05D009160 ORTHO05D009596 2.8e-09 65.9 145 34.5
SpUn0066_0020 Schrenkiella parvula HOM05D009160 ORTHO05D009596 2.8e-09 65.9 145 34.5
Sp6g26890 Schrenkiella parvula HOM05D009160 ORTHO05D009596 1.8e-08 63.2 142 33.1
THA.LOC104820858 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 5.3e-08 61.6 152 29.6
Thhalv10015886m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 2.6e-07 59.3 151 29.8
SpUn0004_0040 Schrenkiella parvula HOM05D009029 ORTHO05D009596 2.6e-07 59.3 82 47.6


User provided reference genes

Program Settings