Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p58560 Brassica napus HOM05D022627 ORTHO05D015478 3.4e-77 291.6 145 100.0
BolC9t58701H Brassica oleracea HOM05D000005 ORTHO05D021735 2.2e-44 182.6 133 75.9
BraA10t44181Z Brassica rapa HOM05D000005 ORTHO05D021735 7.1e-43 177.6 113 81.4
BolC9t58697H Brassica oleracea HOM05D000005 ORTHO05D021735 3.1e-38 162.2 144 65.3
BcaB08g36683 Brassica carinata HOM05D000005 ORTHO05D000449 1.2e-34 150.2 115 73.0
BcaC04g18696 Brassica carinata HOM05D000005 ORTHO05D021735 1.0e-33 147.1 113 71.7
BcaC04g18704 Brassica carinata HOM05D000005 ORTHO05D015478 1.9e-32 142.9 107 72.0
BcaB08g36685 Brassica carinata HOM05D000005 ORTHO05D021735 2.5e-32 142.5 113 68.1
C09p58330 Brassica napus HOM05D000005 ORTHO05D021735 4.3e-32 141.7 113 69.9
BcaC04g18695 Brassica carinata HOM05D000005 ORTHO05D000449 4.8e-31 138.3 108 71.3
BcaC04g18699 Brassica carinata HOM05D000005 ORTHO05D000294 1.4e-30 136.7 109 67.0
C09p58430 Brassica napus HOM05D000005 ORTHO05D015478 1.5e-29 133.3 131 62.6
BcaC04g18707 Brassica carinata HOM05D000005 ORTHO05D013238 7.6e-29 131.0 167 52.1
A10p21180 Brassica napus HOM05D000005 ORTHO05D000449 1.7e-28 129.8 106 69.8
C09p58380 Brassica napus HOM05D000005 ORTHO05D000449 7.1e-27 124.4 108 64.8
C09p58320 Brassica napus HOM05D000005 ORTHO05D028320 1.6e-26 123.2 128 61.7
BolC9t58704H Brassica oleracea HOM05D000005 ORTHO05D028320 6.0e-26 121.3 128 60.9
C02p09830 Brassica napus HOM05D000005 ORTHO05D000449 1.9e-16 89.7 86 58.1
BraA10t44142Z Brassica rapa HOM05D000005 ORTHO05D000449 2.5e-16 89.4 90 61.1
C09p58600 Brassica napus HOM05D022627 ORTHO05D015478 1.6e-15 86.7 55 69.1
BolC9t58702H Brassica oleracea HOM05D000005 ORTHO05D015478 1.1e-14 84.0 68 66.2
C09p58480 Brassica napus HOM05D022627 ORTHO05D015478 3.4e-13 79.0 66 60.6
BolC3t16444H Brassica oleracea HOM05D000005 ORTHO05D000449 3.8e-12 75.5 57 57.9
C02p09810 Brassica napus HOM05D000005 ORTHO05D000449 5.0e-12 75.1 89 49.4
BolC2t06889H Brassica oleracea HOM05D000005 ORTHO05D000449 5.0e-12 75.1 89 49.4
BcaC03g13587 Brassica carinata HOM05D000005 ORTHO05D000449 6.5e-12 74.7 159 34.0
BraA02t05442Z Brassica rapa HOM05D000005 ORTHO05D000449 6.5e-12 74.7 103 46.6
A02p04850 Brassica napus HOM05D000005 ORTHO05D000449 8.5e-12 74.3 74 52.7
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 3.2e-11 72.4 67 52.2
BraA03t12601Z Brassica rapa HOM05D000005 ORTHO05D000449 3.2e-11 72.4 69 53.6
C03p41710 Brassica napus HOM05D000005 ORTHO05D013238 7.2e-11 71.2 62 56.5
C06p08170 Brassica napus HOM05D000005 ORTHO05D040602 9.4e-11 70.9 68 52.9
BolC6t35898H Brassica oleracea HOM05D000005 ORTHO05D040602 9.4e-11 70.9 68 52.9
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 9.4e-11 70.9 61 54.1
C09p58520 Brassica napus HOM05D000005 ORTHO05D013238 2.1e-10 69.7 81 45.7
BcaB05g24569 Brassica carinata HOM05D000005 ORTHO05D000449 1.0e-09 67.4 66 50.0
Sp6g12570 Schrenkiella parvula HOM05D000005 ORTHO05D000449 1.0e-09 67.4 117 40.2
SpUn0039_0030 Schrenkiella parvula HOM05D000005 ORTHO05D000449 1.0e-09 67.4 117 40.2
CARHR194730 Cardamine hirsuta HOM05D000005 ORTHO05D013238 1.1e-08 63.9 58 48.3
CARHR255090 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.1e-08 63.9 116 40.5
A04p06070 Brassica napus HOM05D000005 ORTHO05D000449 1.5e-08 63.5 70 47.1
A09p18590 Brassica napus HOM05D000005 ORTHO05D000294 1.5e-08 63.5 54 53.7
CARHR194700 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.5e-08 63.5 49 55.1
AT5G18350 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 2.0e-08 63.2 65 44.6
Thhalv10023827m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 2.5e-08 62.8 58 50.0
C09p58470 Brassica napus HOM05D000005 ORTHO05D000449 4.3e-08 62.0 51 56.9
BcaB08g36686 Brassica carinata HOM05D000005 ORTHO05D000449 7.4e-08 61.2 82 47.6
CARHR195250 Cardamine hirsuta HOM05D000005 ORTHO05D013238 1.7e-07 60.1 112 39.3
A02p05300 Brassica napus HOM05D000005 ORTHO05D000449 3.7e-07 58.9 61 49.2
BraA04t16311Z Brassica rapa HOM05D000005 ORTHO05D000449 4.8e-07 58.5 47 53.2
C02p10420 Brassica napus HOM05D022627 ORTHO05D015478 6.3e-07 58.2 94 47.9
BolC2t06943H Brassica oleracea HOM05D022627 ORTHO05D015478 6.3e-07 58.2 94 47.9
A02p05030 Brassica napus HOM05D000005 ORTHO05D000449 1.8e-06 56.6 97 41.2
BraA02t05487Z Brassica rapa HOM05D000005 ORTHO05D000449 1.8e-06 56.6 59 50.8
CARHR179460 Cardamine hirsuta HOM05D000005 ORTHO05D000449 2.4e-06 56.2 71 46.5
SpUn0015_0070 Schrenkiella parvula HOM05D000005 ORTHO05D028320 3.1e-06 55.8 71 43.7
CARHR194670 Cardamine hirsuta HOM05D000005 ORTHO05D000449 5.3e-06 55.1 80 46.2
Thhalv10012477m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 5.3e-06 55.1 88 42.0
BcaC03g13589 Brassica carinata HOM05D000005 ORTHO05D000449 9.1e-06 54.3 80 45.0


User provided reference genes

Program Settings