Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p58480 Brassica napus HOM05D022627 ORTHO05D015478 5.0e-38 160.6 80 100.0
C09p58330 Brassica napus HOM05D000005 ORTHO05D021735 1.7e-30 135.6 90 76.7
BolC9t58697H Brassica oleracea HOM05D000005 ORTHO05D021735 1.7e-30 135.6 90 76.7
BraA10t44181Z Brassica rapa HOM05D000005 ORTHO05D021735 8.5e-30 133.3 90 75.6
BcaB08g36685 Brassica carinata HOM05D000005 ORTHO05D021735 1.4e-29 132.5 90 75.6
BolC9t58701H Brassica oleracea HOM05D000005 ORTHO05D021735 4.2e-29 131.0 89 75.3
BcaC04g18696 Brassica carinata HOM05D000005 ORTHO05D021735 6.1e-28 127.1 84 77.4
BcaC04g18704 Brassica carinata HOM05D000005 ORTHO05D015478 2.0e-26 122.1 85 74.1
BcaC04g18699 Brassica carinata HOM05D000005 ORTHO05D000294 4.8e-25 117.5 90 68.9
C09p58380 Brassica napus HOM05D000005 ORTHO05D000449 1.4e-24 115.9 90 65.6
BcaC04g18695 Brassica carinata HOM05D000005 ORTHO05D000449 1.8e-24 115.5 84 69.0
C09p58430 Brassica napus HOM05D000005 ORTHO05D015478 4.1e-24 114.4 90 64.4
BcaC04g18707 Brassica carinata HOM05D000005 ORTHO05D013238 1.1e-21 106.3 97 59.8
BcaB08g36683 Brassica carinata HOM05D000005 ORTHO05D000449 9.4e-21 103.2 90 61.1
C09p58600 Brassica napus HOM05D022627 ORTHO05D015478 2.0e-18 95.5 79 60.8
C02p09830 Brassica napus HOM05D000005 ORTHO05D000449 1.7e-17 92.4 90 53.3
Thhalv10012477m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 4.5e-15 84.3 74 59.5
A10p21180 Brassica napus HOM05D000005 ORTHO05D000449 1.3e-14 82.8 99 50.5
BraA02t05442Z Brassica rapa HOM05D000005 ORTHO05D000449 5.0e-14 80.9 81 55.6
BcaC03g13587 Brassica carinata HOM05D000005 ORTHO05D000449 6.5e-14 80.5 81 51.9
A02p04850 Brassica napus HOM05D000005 ORTHO05D000449 1.1e-13 79.7 81 53.1
C09p58560 Brassica napus HOM05D022627 ORTHO05D015478 1.5e-13 79.3 66 60.6
C02p09810 Brassica napus HOM05D000005 ORTHO05D000449 2.5e-13 78.6 81 51.9
BolC2t06889H Brassica oleracea HOM05D000005 ORTHO05D000449 2.5e-13 78.6 81 51.9
BolC9t58704H Brassica oleracea HOM05D000005 ORTHO05D028320 5.5e-13 77.4 79 54.4
C09p58320 Brassica napus HOM05D000005 ORTHO05D028320 1.2e-12 76.3 79 54.4
CARHR194730 Cardamine hirsuta HOM05D000005 ORTHO05D013238 4.7e-12 74.3 81 49.4
C06p08170 Brassica napus HOM05D000005 ORTHO05D040602 8.0e-12 73.6 96 42.7
BolC6t35898H Brassica oleracea HOM05D000005 ORTHO05D040602 8.0e-12 73.6 96 42.7
C09p58520 Brassica napus HOM05D000005 ORTHO05D013238 2.3e-11 72.0 79 50.6
BolC3t16444H Brassica oleracea HOM05D000005 ORTHO05D000449 2.3e-11 72.0 79 49.4
BcaC03g13589 Brassica carinata HOM05D000005 ORTHO05D000449 5.2e-11 70.9 85 50.6
C03p41710 Brassica napus HOM05D000005 ORTHO05D013238 4.4e-10 67.8 84 47.6
Thhalv10015416m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 4.4e-10 67.8 79 48.1
A02p05030 Brassica napus HOM05D000005 ORTHO05D000449 5.7e-10 67.4 97 46.4
Thhalv10023827m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 5.7e-10 67.4 82 48.8
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 7.5e-10 67.0 87 44.8
Sp6g12570 Schrenkiella parvula HOM05D000005 ORTHO05D000449 9.7e-10 66.6 96 44.8
SpUn0015_0070 Schrenkiella parvula HOM05D000005 ORTHO05D028320 9.7e-10 66.6 96 44.8
SpUn0039_0030 Schrenkiella parvula HOM05D000005 ORTHO05D000449 9.7e-10 66.6 96 44.8
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 1.3e-09 66.2 82 46.3
A02p05300 Brassica napus HOM05D000005 ORTHO05D000449 2.8e-09 65.1 80 47.5
C09p58470 Brassica napus HOM05D000005 ORTHO05D000449 2.8e-09 65.1 80 47.5
BcaC03g13623 Brassica carinata HOM05D000005 ORTHO05D000449 3.7e-09 64.7 61 57.4
CARHR194670 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.8e-08 62.4 80 50.0
AT5G18370 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 2.4e-08 62.0 90 43.3
BolC9t58702H Brassica oleracea HOM05D000005 ORTHO05D015478 3.1e-08 61.6 71 49.3
BcaB05g24569 Brassica carinata HOM05D000005 ORTHO05D000449 5.3e-08 60.8 88 42.0
CARHR194700 Cardamine hirsuta HOM05D000005 ORTHO05D000449 5.3e-08 60.8 91 41.8
A09p18590 Brassica napus HOM05D000005 ORTHO05D000294 7.0e-08 60.5 71 49.3
A03p08770 Brassica napus HOM05D000005 ORTHO05D000449 9.1e-08 60.1 81 50.6
BraA03t12601Z Brassica rapa HOM05D000005 ORTHO05D000449 9.1e-08 60.1 84 47.6
CARHR195250 Cardamine hirsuta HOM05D000005 ORTHO05D013238 9.1e-08 60.1 101 42.6
C02p10420 Brassica napus HOM05D022627 ORTHO05D015478 1.2e-07 59.7 38 76.3
BolC2t06943H Brassica oleracea HOM05D022627 ORTHO05D015478 1.2e-07 59.7 38 76.3
A04p06070 Brassica napus HOM05D000005 ORTHO05D000449 2.0e-07 58.9 80 45.0
AT5G18350 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 5.9e-07 57.4 83 41.0
BcaB01g04906 Brassica carinata HOM05D000005 ORTHO05D000449 1.0e-06 56.6 82 45.1
BraA02t05487Z Brassica rapa HOM05D000005 ORTHO05D000449 1.0e-06 56.6 79 48.1
BraA03t10201Z Brassica rapa HOM05D000005 ORTHO05D000449 1.3e-06 56.2 85 44.7
BraA09t38270Z Brassica rapa HOM05D000005 ORTHO05D013238 1.7e-06 55.8 82 42.7
SpUn0155_0010 Schrenkiella parvula HOM05D000005 ORTHO05D000449 3.8e-06 54.7 75 44.0
CARHR255090 Cardamine hirsuta HOM05D000005 ORTHO05D000449 5.0e-06 54.3 82 47.6
BcaC04g21214 Brassica carinata HOM05D000005 ORTHO05D013238 8.5e-06 53.5 82 40.2
C09p34280 Brassica napus HOM05D000005 ORTHO05D013238 8.5e-06 53.5 82 40.2


User provided reference genes

Program Settings