Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p56640 Brassica napus HOM05D003240 ORTHO05D103622 8.7e-108 393.7 200 100.0
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 3.6e-69 265.4 286 56.6
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 3.6e-69 265.4 286 56.6
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 2.0e-67 259.6 285 55.8
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 2.0e-67 259.6 285 55.8
BolC7t42862H Brassica oleracea HOM05D003240 ORTHO05D017535 2.4e-65 252.7 285 55.4
C07p23280 Brassica napus HOM05D003240 ORTHO05D100423 4.1e-65 251.9 283 55.5
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 7.0e-65 251.1 286 55.2
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 7.0e-65 251.1 286 55.2
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 4.2e-62 241.9 270 55.6
BcaNung03344 Brassica carinata HOM05D003240 ORTHO05D017535 5.5e-62 241.5 286 53.5
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 1.0e-31 141.0 188 53.2
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 1.0e-31 141.0 232 46.1
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 4.3e-30 135.6 232 43.5
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 3.1e-28 129.4 181 50.8
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 3.1e-28 129.4 276 39.9
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 4.1e-25 119.0 209 47.4
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 7.8e-24 114.8 276 38.0
BcaC01g01758 Brassica carinata HOM05D003240 ORTHO05D032152 3.0e-23 112.8 283 37.1
C07p43830 Brassica napus HOM05D003240 ORTHO05D101579 6.6e-23 111.7 69 85.5
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 1.2e-21 107.5 281 34.9
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 2.8e-21 106.3 262 36.3
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 8.1e-21 104.8 196 40.8
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 8.1e-21 104.8 196 40.8
BcaNung00147 Brassica carinata HOM05D003240 ORTHO05D019881 1.1e-20 104.4 202 40.6
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 1.1e-20 104.4 281 34.2
C01p15500 Brassica napus HOM05D003240 ORTHO05D096677 1.8e-20 103.6 111 59.5
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 1.8e-20 103.6 230 40.9
C03p72200 Brassica napus HOM05D003240 ORTHO05D032152 5.2e-20 102.1 275 34.5
BolC3t19516H Brassica oleracea HOM05D003240 ORTHO05D032152 5.2e-20 102.1 275 34.5
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 1.5e-19 100.5 266 38.3
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 3.4e-19 99.4 91 63.7
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 3.4e-19 99.4 91 63.7
BcaC05g26508 Brassica carinata HOM05D003240 ORTHO05D023867 1.4e-17 94.0 98 61.2
BolC5t31284H Brassica oleracea HOM05D003240 ORTHO05D023867 1.4e-17 94.0 98 61.2
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 4.1e-17 92.4 98 60.2
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 1.2e-16 90.9 77 71.4
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 1.2e-16 90.9 77 71.4
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 1.2e-16 90.9 98 59.2
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 1.2e-16 90.9 77 71.4
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 1.6e-16 90.5 90 61.1
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 2.7e-16 89.7 264 36.0
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 6.0e-16 88.6 107 55.1
BcaNung01267 Brassica carinata HOM05D003240 ORTHO05D016738 7.8e-16 88.2 96 58.3
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 1.7e-15 87.0 77 68.8
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 1.7e-15 87.0 77 68.8
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 6.6e-15 85.1 98 58.2
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 1.1e-14 84.3 134 46.3
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 3.3e-14 82.8 189 40.7
C09p73110 Brassica napus HOM05D003240 ORTHO05D040560 3.3e-14 82.8 177 42.4
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 5.6e-14 82.0 94 55.3
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 5.6e-14 82.0 79 65.8
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 7.3e-14 81.6 79 65.8
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 2.1e-13 80.1 104 52.9
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 4.7e-13 79.0 62 72.6
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 8.1e-13 78.2 134 44.0
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 8.1e-13 78.2 79 63.3
BolC4t25181H Brassica oleracea HOM05D003240 ORTHO05D107020 8.1e-13 78.2 85 55.3
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 1.1e-12 77.8 56 76.8
BcaC03g17495 Brassica carinata HOM05D001104 ORTHO05D006624 2.4e-12 76.6 59 69.5
C04p42100 Brassica napus HOM05D003240 ORTHO05D099985 1.5e-11 73.9 102 51.0
C02p54520 Brassica napus HOM05D001104 ORTHO05D006624 3.4e-11 72.8 54 70.4
BolC2t11520H Brassica oleracea HOM05D001104 ORTHO05D006624 1.3e-10 70.9 54 68.5
BcaC01g00646 Brassica carinata HOM05D003240 ORTHO05D027650 2.2e-10 70.1 102 52.9
C02p63910 Brassica napus HOM05D003240 ORTHO05D027650 2.2e-10 70.1 102 52.9
C02p12300 Brassica napus HOM05D003240 ORTHO05D027650 6.4e-10 68.6 119 49.6
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 8.4e-10 68.2 84 48.8
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 8.4e-10 68.2 217 35.9
C07p16840 Brassica napus HOM05D003240 ORTHO05D027650 8.4e-10 68.2 119 48.7
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 8.4e-10 68.2 73 57.5
C02p54570 Brassica napus HOM05D001104 ORTHO05D006624 1.4e-09 67.4 54 66.7
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 2.4e-09 66.6 48 75.0
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 5.4e-09 65.5 84 47.6
BolC6t39565H Brassica oleracea HOM05D008956 ORTHO05D013254 7.1e-09 65.1 85 51.8
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 9.2e-09 64.7 83 45.8
BcaC08g43240 Brassica carinata HOM05D013416 ORTHO05D024230 1.2e-08 64.3 79 49.4
BcaC02g12174 Brassica carinata HOM05D003240 ORTHO05D094064 2.1e-08 63.5 97 53.6
C06p45070 Brassica napus HOM05D008956 ORTHO05D013254 2.1e-08 63.5 85 50.6
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 2.1e-08 63.5 97 48.5
BcaC02g11293 Brassica carinata HOM05D008956 ORTHO05D013254 3.5e-08 62.8 73 54.8
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 3.5e-08 62.8 215 35.8
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 4.6e-08 62.4 74 55.4
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 4.6e-08 62.4 85 49.4
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 4.6e-08 62.4 73 56.2
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 4.6e-08 62.4 85 49.4
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 4.6e-08 62.4 74 55.4
BcaB04g21282 Brassica carinata HOM05D010232 ORTHO05D016018 6.0e-08 62.0 74 55.4
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 6.0e-08 62.0 73 56.2
A09p34340 Brassica napus HOM05D012417 ORTHO05D019895 1.0e-07 61.2 98 45.9
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 1.0e-07 61.2 209 35.4
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 1.0e-07 61.2 209 35.4
BraA09t38980Z Brassica rapa HOM05D012417 ORTHO05D019895 1.0e-07 61.2 98 45.9
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 1.7e-07 60.5 71 57.7
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 1.7e-07 60.5 99 42.4
C09p34960 Brassica napus HOM05D010232 ORTHO05D016018 3.0e-07 59.7 74 54.1
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 3.9e-07 59.3 156 37.2
C06p21700 Brassica napus HOM05D008956 ORTHO05D100830 5.1e-07 58.9 80 50.0
C09p65770 Brassica napus HOM05D008956 ORTHO05D013254 6.6e-07 58.5 85 47.1
BolC9t59399H Brassica oleracea HOM05D008956 ORTHO05D105535 6.6e-07 58.5 85 47.1
BcaB07g33779 Brassica carinata HOM05D003240 ORTHO05D091816 1.5e-06 57.4 64 56.2
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 1.5e-06 57.4 230 33.5
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 1.5e-06 57.4 230 33.5
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 1.9e-06 57.0 93 47.3
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 2.5e-06 56.6 85 45.9
BcaC08g43321 Brassica carinata HOM05D010232 ORTHO05D023893 2.5e-06 56.6 76 48.7
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 3.3e-06 56.2 85 43.5
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 3.3e-06 56.2 85 43.5
BolC1t00828H Brassica oleracea HOM05D010232 ORTHO05D016018 4.3e-06 55.8 74 51.4
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 5.6e-06 55.5 71 54.9


User provided reference genes

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