Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19365 Brassica carinata HOM05D004175 ORTHO05D004664 1.1e-136 490.3 329 100.0
C09p56500 Brassica napus HOM05D004175 ORTHO05D004664 1.1e-136 490.3 329 100.0
BolC9t58515H Brassica oleracea HOM05D004175 ORTHO05D004664 6.8e-134 481.1 329 98.2
A10p20040 Brassica napus HOM05D004175 ORTHO05D004664 1.5e-133 479.9 329 98.5
BraA10t44078Z Brassica rapa HOM05D004175 ORTHO05D004664 7.5e-133 477.6 329 98.2
Thhalv10014089m.g Eutrema salsugineum HOM05D004175 ORTHO05D004664 8.3e-124 447.6 329 91.5
BcaC04g19363 Brassica carinata HOM05D004175 ORTHO05D004664 2.5e-120 436.0 303 97.7
Carub.0006s1803 Capsella rubella HOM05D004175 ORTHO05D004664 2.5e-120 436.0 329 90.0
BNapus_Darmor_BZH_scaffold_38p02220 Brassica napus HOM05D004175 ORTHO05D004664 1.4e-118 430.3 319 91.8
AT5G19680 Arabidopsis thaliana HOM05D004175 ORTHO05D004664 1.8e-118 429.9 329 89.1
BcaB05g23410 Brassica carinata HOM05D004175 ORTHO05D004664 2.4e-118 429.5 322 91.9
AL6G31190 Arabidopsis lyrata HOM05D004175 ORTHO05D004664 5.8e-117 424.9 329 89.1
CARHR193230 Cardamine hirsuta HOM05D004175 ORTHO05D004664 3.0e-113 412.5 329 86.9
Sp6g24700 Schrenkiella parvula HOM05D004175 ORTHO05D004664 1.9e-112 409.8 329 88.1
BcaC03g13699 Brassica carinata HOM05D004175 ORTHO05D004664 4.9e-108 395.2 319 88.4
A02p05730 Brassica napus HOM05D004175 ORTHO05D004664 1.0e-105 387.5 319 86.2
BraA02t05525Z Brassica rapa HOM05D004175 ORTHO05D004664 1.0e-105 387.5 319 86.2
Prupe.7G222100 Prunus persica HOM05D004175 ORTHO05D004664 3.8e-100 369.0 328 78.0
BcaC04g19364 Brassica carinata HOM05D004175 ORTHO05D004664 1.6e-98 363.6 235 94.0
Aa31LG1G8760 Aethionema arabicum HOM05D004175 ORTHO05D004664 1.1e-94 350.9 326 79.4
Atru.chr7.1440 Acer truncatum HOM05D004175 ORTHO05D004664 1.7e-92 343.6 325 76.3
VMungo0251G2778 Vigna mungo HOM05D004175 ORTHO05D004664 1.4e-91 340.5 318 69.2
Lsat_1_v5_gn_5_143861 Lactuca sativa HOM05D004175 ORTHO05D004664 7.9e-90 334.7 311 77.2
CiPaw.03G226400 Carya illinoinensis HOM05D004175 ORTHO05D004664 1.0e-89 334.3 323 76.8
Medtr8g102770 Medicago truncatula HOM05D004175 ORTHO05D004664 2.3e-89 333.2 319 67.7
Lj3g0019618 Lotus japonicus HOM05D004175 ORTHO05D004664 3.0e-89 332.8 314 72.3
Aqoxy7G03896 Aquilegia oxysepala HOM05D004175 ORTHO05D004664 5.1e-89 332.0 321 74.1
DCAR_012049 Daucus carota HOM05D004175 ORTHO05D004664 3.3e-88 329.3 316 74.4
Cc06_g10300 Coffea canephora HOM05D004175 ORTHO05D004664 1.1e-86 324.3 323 72.1
MD02G1060900 Malus domestica HOM05D004175 ORTHO05D004664 1.5e-85 320.5 316 71.2
Ciclev10008855m.g Citrus clementina HOM05D004175 ORTHO05D004664 2.6e-85 319.7 336 66.1
Hund09241 Selenicereus undatus HOM05D004175 ORTHO05D004664 3.4e-85 319.3 334 62.3
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 5.8e-85 318.5 303 76.6
FAN28G2614 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.0e-84 317.8 316 74.7
FAN26G0873 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.3e-84 317.4 316 75.0
FAN26G2762 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.3e-84 317.4 316 75.0
THA.LOC104811087 Tarenaya hassleriana HOM05D004175 ORTHO05D004664 1.3e-84 317.4 326 73.3
Haze_25808 Corylus avellana HOM05D004175 ORTHO05D004664 2.2e-84 316.6 323 65.6
HanXRQChr10g0318361 Helianthus annuus HOM05D004175 ORTHO05D004664 2.2e-84 316.6 311 74.3
FvH4_1g05880 Fragaria vesca HOM05D004175 ORTHO05D004664 3.8e-84 315.8 316 74.7
TWI32G1108 Tripterygium wilfordii HOM05D004175 ORTHO05D004664 4.9e-84 315.5 320 72.5
Thecc.09G102700 Theobroma cacao HOM05D004175 ORTHO05D004664 8.4e-84 314.7 329 72.6
FAN23G2598 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.5e-83 313.2 316 74.4
MD15G1194400 Malus domestica HOM05D004175 ORTHO05D004664 9.3e-83 311.2 326 69.0
BcaC01g02078 Brassica carinata HOM05D004175 ORTHO05D004664 1.6e-82 310.5 216 83.3
Dinv36699 Davidia involucrata HOM05D004175 ORTHO05D004664 2.7e-82 309.7 320 70.6
Ca_17354_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 1.8e-81 307.0 315 66.0
Ca_29618_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 1.8e-81 307.0 315 66.0
SGA_v2.0_scaffold10G05161 Striga asiatica HOM05D004175 ORTHO05D004664 1.8e-81 307.0 320 72.5
Gohir.A13G195800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 5.1e-81 305.4 329 70.5
Phvul.002G310000 Phaseolus vulgaris HOM05D004175 ORTHO05D004664 5.7e-80 302.0 318 63.5
Lalb_Chr05g0223141 Lupinus albus HOM05D004175 ORTHO05D004664 7.4e-80 301.6 328 64.0
Gohir.D06G065000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 2.8e-79 299.7 329 66.0
CANSAT56G2035 Cannabis sativa HOM05D004175 ORTHO05D004664 3.7e-79 299.3 323 63.5
Duzib187G1630 Durio zibethinus HOM05D004175 ORTHO05D004664 3.7e-79 299.3 328 70.1
Glyma.08G034700 Glycine max HOM05D004175 ORTHO05D004664 8.2e-79 298.1 318 63.8
Gohir.A06G066500 Gossypium hirsutum HOM05D004175 ORTHO05D004664 8.2e-79 298.1 325 68.0
PSO210G6864 Papaver somniferum HOM05D004175 ORTHO05D004664 8.2e-79 298.1 326 63.2
Gohir.D13G201000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.4e-78 297.4 329 69.3
ATR0705G211 Amborella trichopoda HOM05D004175 ORTHO05D004664 1.8e-78 297.0 315 71.7
Oeu000358.1 Olea europaea HOM05D004175 ORTHO05D004664 5.3e-78 295.4 328 71.0
Manes.16G110500 Manihot esculenta HOM05D004175 ORTHO05D004664 1.2e-77 294.3 328 69.2
QL02p042164 Quercus lobata HOM05D004175 ORTHO05D004664 1.2e-77 294.3 310 65.5
TAR383G0226 Trochodendron aralioides HOM05D004175 ORTHO05D004664 1.2e-77 294.3 337 61.4
arahy.Tifrunner.gnm1.ann1.2Q2DTK Arachis hypogaea HOM05D004175 ORTHO05D004664 2.6e-77 293.1 327 65.4
arahy.Tifrunner.gnm1.ann1.5M1SBB Arachis hypogaea HOM05D004175 ORTHO05D004664 3.4e-77 292.7 327 66.7
CAN.G274.4 Capsicum annuum HOM05D004175 ORTHO05D004664 5.9e-77 292.0 319 63.0
PSO210G7624 Papaver somniferum HOM05D004175 ORTHO05D004664 5.9e-77 292.0 326 65.3
ECA247G2452 Erigeron canadensis HOM05D004175 ORTHO05D004664 1.3e-76 290.8 289 76.1
Cfa003199 Carpinus fangiana HOM05D004175 ORTHO05D004664 1.7e-76 290.4 323 62.5
Potri.006G163900 Populus trichocarpa HOM05D004175 ORTHO05D004664 1.7e-76 290.4 328 68.0
Eucgr.C03782 Eucalyptus grandis HOM05D004175 ORTHO05D004664 2.2e-76 290.0 311 67.5
Nn2g11614 Nelumbo nucifera HOM05D004175 ORTHO05D004664 3.8e-76 289.3 321 69.2
Peaxi162Scf00001g00131 Petunia axillaris HOM05D004175 ORTHO05D004664 8.5e-76 288.1 329 63.5
Glyma.05G227700 Glycine max HOM05D004175 ORTHO05D004664 1.1e-75 287.7 330 61.2
ECA234G4006 Erigeron canadensis HOM05D004175 ORTHO05D004664 1.4e-75 287.3 329 68.1
GSVIVG01015319001 Vitis vinifera HOM05D004175 ORTHO05D004664 1.4e-75 287.3 327 67.9
vmacro10860 Vaccinium macrocarpon HOM05D004175 ORTHO05D004664 1.9e-75 287.0 311 70.1
C05p31230 Brassica napus HOM05D004175 ORTHO05D004664 4.2e-75 285.8 174 85.6
CsaV3_2G001990 Cucumis sativus L. HOM05D004175 ORTHO05D004664 4.2e-75 285.8 318 69.5
Sopen05g014800 Solanum pennellii HOM05D004175 ORTHO05D004664 4.2e-75 285.8 329 61.1
C03p72980 Brassica napus HOM05D004175 ORTHO05D004664 5.5e-75 285.4 174 85.6
MELO3C004581.2 Cucumis melo HOM05D004175 ORTHO05D004664 1.2e-74 284.3 318 69.5
Solyc05g018150.3 Solanum lycopersicum HOM05D004175 ORTHO05D004664 1.2e-74 284.3 329 60.8
CAN.G525.1 Capsicum annuum HOM05D004175 ORTHO05D004664 2.1e-74 283.5 319 69.0
SHI11434 Sapria himalayana HOM05D004175 ORTHO05D004664 2.1e-74 283.5 356 57.9
CDE02G1631 Ceratophyllum demersum HOM05D004175 ORTHO05D004664 3.6e-74 282.7 323 69.0
Sed0003540 Sechium edule HOM05D004175 ORTHO05D004664 1.0e-73 281.2 322 67.7
Cpa.g.sc40.51 Carica papaya HOM05D004175 ORTHO05D004664 1.4e-73 280.8 300 73.7
Gorai.010G076100 Gossypium raimondii HOM05D004175 ORTHO05D004664 1.8e-73 280.4 329 63.2
Ah.14g083210 Amaranthus hybridus HOM05D004175 ORTHO05D004664 3.9e-73 279.3 331 66.5
Oeu017825.1 Olea europaea HOM05D004175 ORTHO05D004664 3.9e-73 279.3 326 68.7
Actinidia09442 Actinidia chinensis HOM05D001936 ORTHO05D002296 1.9e-72 276.9 320 68.8
BolC2t08664H Brassica oleracea HOM05D004175 ORTHO05D004664 1.9e-72 276.9 216 74.5
Sc08g0007900 Simmondsia chinensis HOM05D004175 ORTHO05D004664 1.9e-72 276.9 327 61.2
CSS0007429 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 3.3e-72 276.2 332 58.1
CSS0045871 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 3.3e-72 276.2 332 58.1
ClCG11G002240 Citrullus lanatus HOM05D004175 ORTHO05D004664 1.3e-71 274.2 348 51.7
Potri.018G086200 Populus trichocarpa HOM05D004175 ORTHO05D004664 2.8e-71 273.1 305 71.8
Psat7g016360 Pisum sativum HOM05D004175 ORTHO05D004664 3.7e-71 272.7 318 62.3
Migut.J01107 Erythranthe guttata HOM05D004175 ORTHO05D004664 4.8e-71 272.3 324 65.7
FAN19G1571 Fragaria x ananassa HOM05D004175 ORTHO05D004664 8.2e-71 271.6 316 61.7
Hund26252 Selenicereus undatus HOM05D004175 ORTHO05D004664 1.1e-70 271.2 310 69.4
SGA_v2.0_scaffold62G21556 Striga asiatica HOM05D004175 ORTHO05D004664 1.8e-70 270.4 323 60.4
RcHm_v2.0_Chr2g0091541 Rosa chinensis HOM05D004175 ORTHO05D004664 2.4e-70 270.0 301 71.1
Sabra18G0074500 Salix brachista HOM05D004175 ORTHO05D004664 9.1e-70 268.1 297 72.4
Nn8g39121 Nelumbo nucifera HOM05D004175 ORTHO05D004664 1.5e-69 267.3 296 70.6
MSTRG.6019 Avicennia marina HOM05D004175 ORTHO05D004664 2.6e-69 266.5 321 64.8
RcHm_v2.0_Chr2g0091621 Rosa chinensis HOM05D004175 ORTHO05D004664 3.4e-69 266.2 291 74.6
C02p31840 Brassica napus HOM05D004175 ORTHO05D004664 1.0e-68 264.6 216 80.6
C09p49510 Brassica napus HOM05D004175 ORTHO05D004664 3.2e-67 259.6 204 83.8
Gorai.013G229800 Gossypium raimondii HOM05D004175 ORTHO05D004664 3.2e-67 259.6 327 65.1
Zm00001eb204970 Zea mays HOM05D004175 ORTHO05D004664 7.2e-67 258.5 310 65.8
C07p36980 Brassica napus HOM05D004175 ORTHO05D004664 2.7e-66 256.5 204 81.9
TPR.G23501 Trifolium pratense HOM05D004175 ORTHO05D004664 3.6e-66 256.1 318 60.7
MBI04_g40471_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 3.9e-65 252.7 287 71.1
Os02g0230100 Oryza sativa ssp. japonica HOM05D004175 ORTHO05D004664 3.9e-65 252.7 320 64.4
C03p57560 Brassica napus HOM05D004175 ORTHO05D004664 8.8e-65 251.5 174 79.3
Rhsim05G0041300 Rhododendron simsii HOM05D004175 ORTHO05D004664 1.3e-63 247.7 326 56.7
C04p04320 Brassica napus HOM05D004175 ORTHO05D004664 1.1e-62 244.6 184 80.4
Duzib168G0201 Durio zibethinus HOM05D004175 ORTHO05D004664 2.4e-62 243.4 244 59.4
C01p01530 Brassica napus HOM05D004175 ORTHO05D004664 4.1e-62 242.7 149 86.6
BcaC03g15042 Brassica carinata HOM05D004175 ORTHO05D004664 5.3e-62 242.3 228 86.0
BolC3t18031H Brassica oleracea HOM05D004175 ORTHO05D004664 5.3e-62 242.3 153 85.6
Lalb_Chr09g0331471 Lupinus albus HOM05D004175 ORTHO05D004664 4.5e-61 239.2 293 64.2
BcaC06g33783 Brassica carinata HOM05D004175 ORTHO05D004664 1.6e-58 230.7 183 83.6
BcaC01g02978 Brassica carinata HOM05D004175 ORTHO05D004664 2.1e-58 230.3 216 69.4
SEGI_33191 Sequoiadendron giganteum HOM05D004175 ORTHO05D004664 2.7e-58 229.9 322 59.6
unitig_26.g8970 Utricularia gibba HOM05D004175 ORTHO05D004664 1.0e-57 228.0 324 54.9
COL.COLO4_34774 Corchorus olitorius HOM05D004175 ORTHO05D004664 1.8e-57 227.3 164 74.4
Mapoly0051s0012 Marchantia polymorpha HOM05D004175 ORTHO05D004664 5.7e-56 222.2 317 58.4
EL10Ac8g18403 Beta vulgaris HOM05D004175 ORTHO05D004664 3.7e-55 219.5 296 65.2
BolC3t19136H Brassica oleracea HOM05D004175 ORTHO05D004664 5.3e-54 215.7 151 83.4
AagrBONN_evm.TU.Sc2ySwM_117.1201 Anthoceros agrestis HOM05D004175 ORTHO05D004664 4.0e-49 199.5 315 50.2
SMO337G0008 Selaginella moellendorffii HOM05D004175 ORTHO05D004664 1.1e-46 191.4 316 56.6
Pp3c1_38690 Physcomitrium patens HOM05D004175 ORTHO05D004664 1.4e-46 191.0 310 48.4
BolC7t44210H Brassica oleracea HOM05D004175 ORTHO05D004664 5.9e-45 185.7 113 87.6
Gorai.001G184800 Gossypium raimondii HOM05D004175 ORTHO05D004664 5.0e-44 182.6 155 63.2
A07p01400 Brassica napus HOM05D004175 ORTHO05D004664 1.2e-40 171.4 156 64.1
Nitab4.5_0000012g0030 Nicotiana tabacum HOM05D004175 ORTHO05D004664 2.2e-39 167.2 168 58.9
CBR_g36965 Chara braunii HOM05D004175 ORTHO05D004664 8.3e-39 165.2 323 49.8
Pp3c2_9120 Physcomitrium patens HOM05D004175 ORTHO05D004664 1.8e-38 164.1 333 42.9
Lj7A662T62 Lonicera japonica HOM05D004175 ORTHO05D004664 4.1e-38 162.9 212 72.2
MBI04_g06580_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 2.7e-37 160.2 119 71.4
BraA03t14262Z Brassica rapa HOM05D004175 ORTHO05D004664 7.2e-35 152.1 150 61.3
Gorai.009G408400 Gossypium raimondii HOM05D004175 ORTHO05D004664 4.7e-34 149.4 207 65.7
Nitab4.5_0003199g0020 Nicotiana tabacum HOM05D004175 ORTHO05D004664 4.7e-34 149.4 158 55.1
MD03G1179500 Malus domestica HOM05D004175 ORTHO05D004664 8.3e-31 138.7 159 57.9
Gohir.D04G104800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 7.0e-30 135.6 181 69.6
Glyma.08G276800 Glycine max HOM05D004175 ORTHO05D004664 2.3e-28 130.6 169 50.3
FAN10G1780 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.7e-20 104.4 84 63.1
FAN10G3383 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.7e-20 104.4 84 63.1
BolC9t58072H Brassica oleracea HOM05D004175 ORTHO05D004664 8.6e-20 102.1 96 60.4
FAN10G3778 Fragaria x ananassa HOM05D004175 ORTHO05D004664 8.6e-20 102.1 84 63.1
C03p68800 Brassica napus HOM05D004175 ORTHO05D004664 7.3e-19 99.0 56 83.9
C09p52070 Brassica napus HOM05D004175 ORTHO05D004664 8.0e-18 95.5 102 56.9
Cre05.g234655 Chlamydomonas reinhardtii HOM05D004175 ORTHO05D004664 1.2e-16 91.7 144 41.0
FAN10G2625 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.2e-16 91.7 77 62.3
COL.COLO4_34775 Corchorus olitorius HOM05D004175 ORTHO05D004664 1.5e-16 91.3 96 53.1
FAN28G1141 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.2e-14 83.6 77 58.4
MBI04_g44954_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 1.2e-13 81.6 158 49.4
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.1e-11 75.1 67 62.7
FvH4_5g23601 Fragaria vesca HOM05D004175 ORTHO05D045656 2.5e-11 73.9 67 62.7
PRCOL_00004941 Prasinoderma coloniale HOM05D004175 ORTHO05D004664 3.3e-11 73.6 165 33.9
BolC4t22068H Brassica oleracea HOM05D004175 ORTHO05D004664 4.7e-10 69.7 39 82.1
FAN20G2587 Fragaria x ananassa HOM05D000366 ORTHO05D000437 6.8e-09 65.9 106 40.6
FvH4_3g18060 Fragaria vesca HOM05D004175 ORTHO05D004664 5.8e-08 62.8 46 65.2
FAN19G2726 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.1e-06 58.5 61 54.1


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