Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p55850 Brassica napus HOM05D005703 ORTHO05D006643 1.4e-142 509.6 260 100.0
BcaC04g19425 Brassica carinata HOM05D005703 ORTHO05D006643 1.9e-91 339.7 204 88.2
C04p21760 Brassica napus HOM05D005703 ORTHO05D006643 3.3e-91 339.0 208 87.0
BolC4t23697H Brassica oleracea HOM05D005703 ORTHO05D006643 4.3e-75 285.4 214 76.2
BcaB06g27102 Brassica carinata HOM05D005703 ORTHO05D006643 3.7e-74 282.3 208 75.0
C03p15450 Brassica napus HOM05D005703 ORTHO05D006643 2.0e-72 276.6 171 85.4
C01p09750 Brassica napus HOM05D005703 ORTHO05D006643 1.0e-47 194.5 188 63.3
C03p56750 Brassica napus HOM05D005703 ORTHO05D006643 4.0e-44 182.6 108 84.3
C08p41580 Brassica napus HOM05D005703 ORTHO05D006643 2.6e-43 179.9 208 54.8
Sp4g00560 Schrenkiella parvula HOM05D005703 ORTHO05D006643 5.7e-43 178.7 208 54.8
BolC8t51720H Brassica oleracea HOM05D005703 ORTHO05D006643 1.3e-42 177.6 208 53.8
A09p58290 Brassica napus HOM05D005703 ORTHO05D006643 1.4e-41 174.1 208 53.4
BraA09t41216Z Brassica rapa HOM05D005703 ORTHO05D006643 1.4e-41 174.1 208 53.4
Thhalv10000241m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 3.1e-41 172.9 208 52.9
AL4G10560 Arabidopsis lyrata HOM05D005703 ORTHO05D006643 3.5e-40 169.5 208 50.5
AT2G21385 Arabidopsis thaliana HOM05D005703 ORTHO05D006643 7.7e-40 168.3 208 50.5
Carub.0004s0043 Capsella rubella HOM05D005703 ORTHO05D006643 1.3e-39 167.5 208 50.0
CARHR112270 Cardamine hirsuta HOM05D005703 ORTHO05D006643 2.9e-39 166.4 208 51.4
Aa31LG7G15130 Aethionema arabicum HOM05D005703 ORTHO05D001153 9.4e-38 161.4 208 50.0
THA.LOC104824803 Tarenaya hassleriana HOM05D005703 ORTHO05D006643 3.0e-36 156.4 208 48.6
BraA01t01909Z Brassica rapa HOM05D005703 ORTHO05D006643 1.2e-35 154.5 208 51.0
C02p54250 Brassica napus HOM05D005703 ORTHO05D006643 5.7e-35 152.1 80 90.0
Thecc.02G078100 Theobroma cacao HOM05D005703 ORTHO05D006643 2.2e-34 150.2 214 44.9
Atru.chr5.3109 Acer truncatum HOM05D005703 ORTHO05D006643 4.8e-34 149.1 215 45.6
Cpa.g.sc150.43 Carica papaya HOM05D005703 ORTHO05D006643 1.4e-33 147.5 214 44.9
Eucgr.D00178 Eucalyptus grandis HOM05D005703 ORTHO05D006643 1.4e-33 147.5 214 44.9
Dinv23475 Davidia involucrata HOM05D005703 ORTHO05D006643 4.1e-33 146.0 209 45.5
Actinidia27862 Actinidia chinensis HOM05D005703 ORTHO05D006643 5.4e-33 145.6 214 45.3
Aqoxy5G01507 Aquilegia oxysepala HOM05D005703 ORTHO05D006643 7.0e-33 145.2 214 46.3
PSO170G4951 Papaver somniferum HOM05D005703 ORTHO05D006643 7.0e-33 145.2 214 44.4
Haze_02308 Corylus avellana HOM05D005703 ORTHO05D006643 1.2e-32 144.4 214 44.4
Rhsim05G0069500 Rhododendron simsii HOM05D005703 ORTHO05D006643 1.6e-32 144.1 208 45.7
Lj5C191G8 Lonicera japonica HOM05D005703 ORTHO05D006643 2.0e-32 143.7 210 45.2
Potri.004G160800 Populus trichocarpa HOM05D005703 ORTHO05D006643 2.0e-32 143.7 214 43.9
Actinidia02238 Actinidia chinensis HOM05D005703 ORTHO05D006643 2.7e-32 143.3 214 44.9
MELO3C013421.2 Cucumis melo HOM05D005703 ORTHO05D006643 2.7e-32 143.3 214 44.9
ClCG02G004580 Citrullus lanatus HOM05D005703 ORTHO05D006643 3.5e-32 142.9 217 44.2
BolC2t11489H Brassica oleracea HOM05D005703 ORTHO05D006643 7.7e-32 141.7 189 48.1
CsaV3_7G000370 Cucumis sativus L. HOM05D005703 ORTHO05D006643 1.0e-31 141.4 214 44.9
Hma1.2p1_0066F.1_g035910 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 1.0e-31 141.4 226 42.5
Hma1.2p1_0066F.1_g035920 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 1.0e-31 141.4 226 42.5
Peaxi162Scf00016g00231 Petunia axillaris HOM05D005703 ORTHO05D006643 1.0e-31 141.4 214 44.4
Solyc01g110160.4 Solanum lycopersicum HOM05D005703 ORTHO05D006643 1.3e-31 141.0 214 44.4
MD10G1066100 Malus domestica HOM05D005703 ORTHO05D006643 1.7e-31 140.6 214 43.0
RcHm_v2.0_Chr6g0266981 Rosa chinensis HOM05D005703 ORTHO05D006643 1.7e-31 140.6 214 43.0
Sopen01g052320 Solanum pennellii HOM05D005703 ORTHO05D006643 1.7e-31 140.6 214 44.4
COL.COLO4_26014 Corchorus olitorius HOM05D005703 ORTHO05D006643 2.9e-31 139.8 214 43.9
vmacro17444 Vaccinium macrocarpon HOM05D005703 ORTHO05D006643 2.9e-31 139.8 208 44.7
Lsat_1_v5_gn_5_125081 Lactuca sativa HOM05D005703 ORTHO05D006643 3.8e-31 139.4 215 44.7
Sabra04G0107600 Salix brachista HOM05D005703 ORTHO05D006643 3.8e-31 139.4 214 42.5
PGSC0003DMG400030971 Solanum tuberosum HOM05D005703 ORTHO05D006643 5.0e-31 139.0 214 43.9
Gohir.D12G030600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 6.5e-31 138.7 208 44.2
GSVIVG01024205001 Vitis vinifera HOM05D005703 ORTHO05D006643 6.5e-31 138.7 214 43.5
CSS0001334 Camellia sinensis var. sinensis HOM05D005703 ORTHO05D006643 8.6e-31 138.3 214 43.5
FAN20G2472 Fragaria x ananassa HOM05D005703 ORTHO05D006643 8.6e-31 138.3 211 44.1
MELO3C002791.2 Cucumis melo HOM05D005703 ORTHO05D006643 1.1e-30 137.9 214 43.5
FAN24G3327 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.1e-30 137.9 211 43.6
Manes.11G087800 Manihot esculenta HOM05D005703 ORTHO05D006643 1.1e-30 137.9 214 43.5
FvH4_2g10050 Fragaria vesca HOM05D005703 ORTHO05D006643 1.5e-30 137.5 214 43.0
FAN27G2042 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.5e-30 137.5 211 43.1
Ciclev10028680m.g Citrus clementina HOM05D005703 ORTHO05D006643 2.5e-30 136.7 208 44.2
Gorai.008G031500 Gossypium raimondii HOM05D005703 ORTHO05D006643 2.5e-30 136.7 208 43.3
QL11p045612 Quercus lobata HOM05D005703 ORTHO05D006643 3.3e-30 136.3 214 43.0
Cc02_g17090 Coffea canephora HOM05D005703 ORTHO05D006643 9.5e-30 134.8 214 42.1
TWI31G0330 Tripterygium wilfordii HOM05D005703 ORTHO05D006643 9.5e-30 134.8 214 41.6
SalBow6G5125 Salvia bowleyana HOM05D005703 ORTHO05D006643 1.2e-29 134.4 214 43.0
CiPaw.06G130900 Carya illinoinensis HOM05D005703 ORTHO05D006643 2.1e-29 133.7 214 42.1
DCAR_022931 Daucus carota HOM05D005703 ORTHO05D006643 2.8e-29 133.3 215 41.9
Nn6g32200 Nelumbo nucifera HOM05D005703 ORTHO05D006643 4.7e-29 132.5 214 43.5
SGA_v2.0_scaffold58G20483 Striga asiatica HOM05D005703 ORTHO05D006643 4.7e-29 132.5 214 42.1
Migut.B00193 Erythranthe guttata HOM05D005703 ORTHO05D006643 8.0e-29 131.7 214 41.6
CDE09G1081 Ceratophyllum demersum HOM05D005703 ORTHO05D006643 1.0e-28 131.3 214 43.0
Lalb_Chr03g0025421 Lupinus albus HOM05D005703 ORTHO05D006643 1.4e-28 131.0 208 42.8
ATR0661G148 Amborella trichopoda HOM05D005703 ORTHO05D006643 1.8e-28 130.6 214 41.6
ECA234G1754 Erigeron canadensis HOM05D005703 ORTHO05D006643 1.8e-28 130.6 208 43.3
Lj3g0017018 Lotus japonicus HOM05D005703 ORTHO05D006643 1.8e-28 130.6 214 39.7
arahy.Tifrunner.gnm1.ann1.R55P3J Arachis hypogaea HOM05D005703 ORTHO05D006643 2.3e-28 130.2 209 40.7
MSTRG.20056 Avicennia marina HOM05D005703 ORTHO05D006643 4.0e-28 129.4 214 42.5
arahy.Tifrunner.gnm1.ann1.YBLQ63 Arachis hypogaea HOM05D005703 ORTHO05D006643 8.9e-28 128.3 208 40.4
Glyma.11G112900 Glycine max HOM05D005703 ORTHO05D006643 2.0e-27 127.1 208 40.4
HPP92_025877 Vanilla planifolia HOM05D005703 ORTHO05D006643 2.6e-27 126.7 214 39.7
Hund00227 Selenicereus undatus HOM05D005703 ORTHO05D006643 3.4e-27 126.3 210 41.4
VMungo1127G0812 Vigna mungo HOM05D005703 ORTHO05D006643 4.4e-27 125.9 208 40.9
Phvul.011G040900 Phaseolus vulgaris HOM05D005703 ORTHO05D006643 1.3e-26 124.4 208 40.4
Sc14g0002020 Simmondsia chinensis HOM05D005703 ORTHO05D006643 1.3e-26 124.4 214 40.2
HanXRQChr12g0373591 Helianthus annuus HOM05D005703 ORTHO05D006643 2.8e-26 123.2 208 42.3
Ca_20918_v3 Cicer arietinum L. HOM05D005703 ORTHO05D006643 3.7e-26 122.9 215 38.6
FAN15G0097 Fragaria x ananassa HOM05D005703 ORTHO05D006643 4.9e-26 122.5 253 36.4
Os09g0531100 Oryza sativa ssp. japonica HOM05D005703 ORTHO05D006643 1.4e-25 120.9 214 40.2
Prupe.8G088000 Prunus persica HOM05D005703 ORTHO05D006643 5.4e-25 119.0 214 39.7
TPR.G16235 Trifolium pratense HOM05D005703 ORTHO05D006643 5.4e-25 119.0 215 37.2
Psat7g139960 Pisum sativum HOM05D005703 ORTHO05D006643 7.0e-25 118.6 215 39.1
Medtr4g071190 Medicago truncatula HOM05D005703 ORTHO05D006643 9.2e-25 118.2 215 37.7
Glyma.12G038800 Glycine max HOM05D005703 ORTHO05D006643 3.5e-24 116.3 208 38.0
unitig_0.g54 Utricularia gibba HOM05D005703 ORTHO05D006643 3.5e-24 116.3 216 37.5
AUR62010417 Chenopodium quinoa HOM05D005703 ORTHO05D006643 4.5e-24 115.9 225 36.4
EL10Ac9g21670 Beta vulgaris HOM05D005703 ORTHO05D006643 5.9e-24 115.5 236 36.0
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 5.0e-23 112.5 232 36.2
AUR62016798 Chenopodium quinoa HOM05D005703 ORTHO05D006643 6.6e-23 112.1 240 34.6
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 2.5e-22 110.2 214 37.4
Zm00001eb353590 Zea mays HOM05D005703 ORTHO05D006643 5.6e-22 109.0 215 38.1
Duzib132G0736 Durio zibethinus HOM05D005703 ORTHO05D006643 1.6e-21 107.5 153 45.8
BolC1t00937H Brassica oleracea HOM05D005703 ORTHO05D006643 8.0e-21 105.1 145 51.0
Mapoly0084s0041 Marchantia polymorpha HOM05D005703 ORTHO05D006643 1.4e-20 104.4 216 36.6
BcaC01g06448 Brassica carinata HOM05D005703 ORTHO05D006643 3.0e-20 103.2 87 67.8
Sed0007704 Sechium edule HOM05D005703 ORTHO05D006643 5.2e-20 102.4 147 45.6
Cfa005074 Carpinus fangiana HOM05D005703 ORTHO05D006643 9.8e-19 98.2 112 52.7
MBI01_g29867_MAGBIO Magnolia biondii HOM05D005703 ORTHO05D006643 2.9e-18 96.7 146 43.8
CANSAT11G2682 Cannabis sativa HOM05D005703 ORTHO05D006643 1.2e-16 91.3 106 55.7
Pp3c22_4620 Physcomitrium patens HOM05D005703 ORTHO05D006643 3.5e-16 89.7 208 34.1
Gohir.A12G041600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 6.0e-16 89.0 102 52.9
SMO290G0004 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 3.9e-15 86.3 215 33.5
SMO356G0278 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 3.9e-15 86.3 213 33.3
SMO356G0671 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 3.9e-15 86.3 215 33.5
SMO290G0013 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 6.6e-15 85.5 215 33.5
AagrBONN_evm.TU.Sc2ySwM_228.378 Anthoceros agrestis HOM05D005703 ORTHO05D006643 5.6e-14 82.4 110 45.5
C03p56740 Brassica napus HOM05D005703 ORTHO05D006643 1.1e-12 78.2 40 95.0
TAR381G0871 Trochodendron aralioides HOM05D005703 ORTHO05D006643 6.8e-12 75.5 146 37.7
Thhalv10005656m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 1.2e-11 74.7 38 94.7
BcaC09g52221 Brassica carinata HOM05D005703 ORTHO05D006643 1.5e-11 74.3 40 90.0
BolC1t00936H Brassica oleracea HOM05D005703 ORTHO05D006643 2.9e-10 70.1 40 87.5
SEGI_33335 Sequoiadendron giganteum HOM05D005703 ORTHO05D006643 6.0e-08 62.4 85 42.4
Potri.009G121902 Populus trichocarpa HOM05D005703 ORTHO05D006643 2.3e-07 60.5 143 32.9
QL11p045593 Quercus lobata HOM05D005703 ORTHO05D006643 6.6e-07 58.9 43 60.5


User provided reference genes

Program Settings