Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p54590 Brassica napus HOM05D004241 ORTHO05D018769 3.7e-61 238.0 121 100.0
C04p53880 Brassica napus HOM05D004241 ORTHO05D018769 8.2e-61 236.9 121 99.2
BolC1t02697H Brassica oleracea HOM05D004241 ORTHO05D018769 1.6e-51 206.1 161 71.4
BraA07t28631Z Brassica rapa HOM05D004241 ORTHO05D018769 4.3e-25 118.2 66 89.4
A09p02030 Brassica napus HOM05D004241 ORTHO05D018769 1.2e-24 116.7 66 89.4
BraA02t07759Z Brassica rapa HOM05D004241 ORTHO05D018769 1.2e-24 116.7 66 89.4
Cpa.g.sc11.77 Carica papaya HOM05D004241 ORTHO05D006031 1.6e-24 116.3 64 85.9
BcaC09g50106 Brassica carinata HOM05D004241 ORTHO05D006031 3.2e-20 102.1 110 55.5
BolC1t02821H Brassica oleracea HOM05D004241 ORTHO05D006031 3.2e-20 102.1 110 55.5
BraA01t02235Z Brassica rapa HOM05D004241 ORTHO05D006031 3.2e-20 102.1 110 55.5
BcaB01g00474 Brassica carinata HOM05D004241 ORTHO05D006031 9.2e-20 100.5 110 54.5
BcaNung00368 Brassica carinata HOM05D004241 ORTHO05D006031 9.2e-20 100.5 110 54.5
A09p44970 Brassica napus HOM05D004241 ORTHO05D006031 9.2e-20 100.5 110 54.5
C08p27050 Brassica napus HOM05D004241 ORTHO05D006031 9.2e-20 100.5 110 54.5
BolC8t50320H Brassica oleracea HOM05D004241 ORTHO05D006031 9.2e-20 100.5 110 54.5
BraA09t39957Z Brassica rapa HOM05D004241 ORTHO05D006031 9.2e-20 100.5 110 54.5
Thhalv10010408m.g Eutrema salsugineum HOM05D004241 ORTHO05D006031 1.2e-19 100.1 110 54.5
Lj3A950T42 Lonicera japonica HOM05D004241 ORTHO05D006031 1.2e-19 100.1 110 54.5
Sp5g10450 Schrenkiella parvula HOM05D004241 ORTHO05D006031 1.2e-19 100.1 110 54.5
BcaB01g00414 Brassica carinata HOM05D004241 ORTHO05D006031 4.6e-19 98.2 110 53.6
A01p23250 Brassica napus HOM05D003030 ORTHO05D006031 4.6e-19 98.2 51 94.1
AL5G32280 Arabidopsis lyrata HOM05D004241 ORTHO05D006031 6.0e-19 97.8 110 52.7
Carub.0005s1817 Capsella rubella HOM05D004241 ORTHO05D006031 6.0e-19 97.8 110 52.7
Aa31LG10G9090 Aethionema arabicum HOM05D004241 ORTHO05D006031 7.8e-19 97.4 110 52.7
AT3G51820 Arabidopsis thaliana HOM05D004241 ORTHO05D006031 7.8e-19 97.4 110 52.7
CAN.G283.14 Capsicum annuum HOM05D004241 ORTHO05D006031 7.8e-19 97.4 110 51.8
CARHR161450 Cardamine hirsuta HOM05D004241 ORTHO05D006031 7.8e-19 97.4 110 52.7
Hma1.2p1_0362F.1_g136490 Hydrangea macrophylla HOM05D004241 ORTHO05D006031 7.8e-19 97.4 110 52.7
Nitab4.5_0000261g0130 Nicotiana tabacum HOM05D004241 ORTHO05D006031 7.8e-19 97.4 110 51.8
Nitab4.5_0008676g0010 Nicotiana tabacum HOM05D004241 ORTHO05D006031 7.8e-19 97.4 110 51.8
Solyc09g014760.4 Solanum lycopersicum HOM05D004241 ORTHO05D006031 7.8e-19 97.4 110 51.8
Sopen09g007610 Solanum pennellii HOM05D004241 ORTHO05D006031 7.8e-19 97.4 110 51.8
PGSC0003DMG400008481 Solanum tuberosum HOM05D004241 ORTHO05D006031 7.8e-19 97.4 110 51.8
arahy.Tifrunner.gnm1.ann1.8A66NB Arachis hypogaea HOM05D004241 ORTHO05D006031 1.0e-18 97.1 110 51.8
arahy.Tifrunner.gnm1.ann1.Z8S8NK Arachis hypogaea HOM05D004241 ORTHO05D006031 1.0e-18 97.1 110 51.8
C01p28890 Brassica napus HOM05D003030 ORTHO05D006031 1.0e-18 97.1 51 92.2
Cc06_g01120 Coffea canephora HOM05D004241 ORTHO05D006031 1.0e-18 97.1 110 51.8
Dinv13159 Davidia involucrata HOM05D004241 ORTHO05D006031 1.0e-18 97.1 110 52.7
Peaxi162Scf00890g00119 Petunia axillaris HOM05D004241 ORTHO05D006031 1.0e-18 97.1 110 52.7
THA.LOC104805975 Tarenaya hassleriana HOM05D004241 ORTHO05D006031 1.0e-18 97.1 110 51.8
Oeu038754.1 Olea europaea HOM05D004241 ORTHO05D006031 1.3e-18 96.7 110 52.7
Actinidia05359 Actinidia chinensis HOM05D004241 ORTHO05D006031 1.7e-18 96.3 110 51.8
Aqoxy2G00847 Aquilegia oxysepala HOM05D004241 ORTHO05D006031 1.7e-18 96.3 110 50.9
CSS0018345 Camellia sinensis var. sinensis HOM05D004241 ORTHO05D006031 1.7e-18 96.3 110 51.8
Oeu017800.1 Olea europaea HOM05D004241 ORTHO05D006031 1.7e-18 96.3 110 51.8
PSO339G5814 Papaver somniferum HOM05D004241 ORTHO05D006031 1.7e-18 96.3 110 50.9
PSO801G0614 Papaver somniferum HOM05D004241 ORTHO05D006031 1.7e-18 96.3 110 50.9
CANSAT35G0589 Cannabis sativa HOM05D004241 ORTHO05D006031 2.3e-18 95.9 110 51.8
Eucgr.A00535 Eucalyptus grandis HOM05D004241 ORTHO05D006031 2.3e-18 95.9 110 51.8
MD00G1061800 Malus domestica HOM05D004241 ORTHO05D006031 2.3e-18 95.9 110 51.8
Medtr7g069210 Medicago truncatula HOM05D004241 ORTHO05D006031 2.3e-18 95.9 110 51.8
Psat3g126440 Pisum sativum HOM05D004241 ORTHO05D006031 2.3e-18 95.9 139 45.3
PGR031G0770 Punica granatum HOM05D004241 ORTHO05D006031 2.3e-18 95.9 110 51.8
Sed0025380 Sechium edule HOM05D004241 ORTHO05D006031 2.3e-18 95.9 110 51.8
Sc07g0006700 Simmondsia chinensis HOM05D004241 ORTHO05D006031 2.3e-18 95.9 110 50.9
TPR.G35446 Trifolium pratense HOM05D004241 ORTHO05D006031 2.3e-18 95.9 110 51.8
CiPaw.09G211300 Carya illinoinensis HOM05D004241 ORTHO05D006031 3.0e-18 95.5 110 50.9
Ca_07660_v3 Cicer arietinum L. HOM05D004241 ORTHO05D006031 3.0e-18 95.5 110 51.8
Ciclev10011985m.g Citrus clementina HOM05D004241 ORTHO05D006031 3.0e-18 95.5 110 51.8
MELO3C026000.2 Cucumis melo HOM05D004241 ORTHO05D006031 3.0e-18 95.5 110 51.8
CsaV3_4G026340 Cucumis sativus L. HOM05D004241 ORTHO05D006031 3.0e-18 95.5 110 51.8
Lj1g0026131 Lotus japonicus HOM05D004241 ORTHO05D006031 3.0e-18 95.5 110 50.9
RcHm_v2.0_Chr3g0462631 Rosa chinensis HOM05D004241 ORTHO05D006031 3.0e-18 95.5 110 50.9
HPP92_013785 Vanilla planifolia HOM05D004241 ORTHO05D006031 3.0e-18 95.5 110 50.0
GSVIVG01011187001 Vitis vinifera HOM05D004241 ORTHO05D006031 3.0e-18 95.5 110 51.8
Lalb_Chr19g0124421 Lupinus albus HOM05D004241 ORTHO05D006031 3.9e-18 95.1 110 50.9
MD12G1171900 Malus domestica HOM05D004241 ORTHO05D006031 3.9e-18 95.1 110 50.9
Os05g0349700 Oryza sativa ssp. japonica HOM05D004241 ORTHO05D006031 3.9e-18 95.1 110 51.8
Prupe.6G280100 Prunus persica HOM05D004241 ORTHO05D006031 3.9e-18 95.1 110 50.9
Sabra06G0078400 Salix brachista HOM05D004241 ORTHO05D006031 3.9e-18 95.1 110 50.9
Atru.chr8.2269 Acer truncatum HOM05D004241 ORTHO05D006031 5.0e-18 94.7 110 51.8
Cfa017182 Carpinus fangiana HOM05D004241 ORTHO05D006031 5.0e-18 94.7 110 50.9
Migut.J00141 Erythranthe guttata HOM05D004241 ORTHO05D006031 5.0e-18 94.7 110 50.9
Glyma.07G152300 Glycine max HOM05D004241 ORTHO05D006031 5.0e-18 94.7 110 50.9
Potri.006G102100 Populus trichocarpa HOM05D004241 ORTHO05D006031 5.0e-18 94.7 110 50.0
TWI74G0606 Tripterygium wilfordii HOM05D004241 ORTHO05D006031 5.0e-18 94.7 110 50.9
EL10Ac5g12540 Beta vulgaris HOM05D004241 ORTHO05D006031 6.6e-18 94.4 110 50.0
AUR62030817 Chenopodium quinoa HOM05D004241 ORTHO05D006031 6.6e-18 94.4 110 50.0
Glyma.18G203400 Glycine max HOM05D004241 ORTHO05D006031 6.6e-18 94.4 110 50.9
HanXRQChr06g0182231 Helianthus annuus HOM05D004241 ORTHO05D006031 6.6e-18 94.4 110 51.8
Manes.09G106900 Manihot esculenta HOM05D004241 ORTHO05D006031 6.6e-18 94.4 110 50.0
SEGI_30165 Sequoiadendron giganteum HOM05D004241 ORTHO05D006031 6.6e-18 94.4 110 50.0
DCAR_015394 Daucus carota HOM05D004241 ORTHO05D006031 8.6e-18 94.0 110 50.9
Phvul.008G096500 Phaseolus vulgaris HOM05D004241 ORTHO05D006031 8.6e-18 94.0 110 50.0
VMungo1383G0980 Vigna mungo HOM05D004241 ORTHO05D006031 8.6e-18 94.0 110 50.0
Glyma.16G098000 Glycine max HOM05D004241 ORTHO05D006031 1.1e-17 93.6 110 50.0
Gohir.A04G092900 Gossypium hirsutum HOM05D004241 ORTHO05D006031 1.1e-17 93.6 110 49.1
Gohir.D04G132200 Gossypium hirsutum HOM05D004241 ORTHO05D006031 1.1e-17 93.6 110 49.1
MBI15_g19417_MAGBIO Magnolia biondii HOM05D004241 ORTHO05D006031 1.1e-17 93.6 110 49.1
CiPaw.10G157700 Carya illinoinensis HOM05D004241 ORTHO05D006031 1.5e-17 93.2 110 49.1
ClCG04G006920 Citrullus lanatus HOM05D004241 ORTHO05D006031 1.5e-17 93.2 109 51.4
Duzib128G1618 Durio zibethinus HOM05D004241 ORTHO05D006031 1.5e-17 93.2 110 49.1
Gorai.012G116000 Gossypium raimondii HOM05D004241 ORTHO05D006031 1.5e-17 93.2 111 48.6
Nn2g13169 Nelumbo nucifera HOM05D004241 ORTHO05D006031 1.5e-17 93.2 110 49.1
unitig_578.g15901 Utricularia gibba HOM05D004241 ORTHO05D006031 1.5e-17 93.2 110 48.2
ATR0681G392 Amborella trichopoda HOM05D004241 ORTHO05D006031 1.9e-17 92.8 110 48.2
CDE04G1685 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 1.9e-17 92.8 110 48.2
ECA236G0379 Erigeron canadensis HOM05D000031 ORTHO05D006031 1.9e-17 92.8 110 50.9
Thecc.05G012600 Theobroma cacao HOM05D004241 ORTHO05D006031 1.9e-17 92.8 110 49.1
CDE08G0537 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 2.5e-17 92.4 110 48.2
FvH4_6g11190 Fragaria vesca HOM05D004241 ORTHO05D006031 2.5e-17 92.4 110 50.0
FAN02G4369 Fragaria x ananassa HOM05D004241 ORTHO05D006031 2.5e-17 92.4 110 50.0
FAN05G3727 Fragaria x ananassa HOM05D004241 ORTHO05D006031 2.5e-17 92.4 110 50.0
FAN09G0733 Fragaria x ananassa HOM05D004241 ORTHO05D006031 2.5e-17 92.4 110 50.0
FAN14G2181 Fragaria x ananassa HOM05D004241 ORTHO05D006031 2.5e-17 92.4 110 50.0
SMO271G0089 Selaginella moellendorffii HOM05D004241 ORTHO05D006031 2.5e-17 92.4 110 49.1
TAR636G3470 Trochodendron aralioides HOM05D004241 ORTHO05D006031 2.5e-17 92.4 110 48.2
Dinv01710 Davidia involucrata HOM05D004241 ORTHO05D006031 3.3e-17 92.0 110 49.1
QL07p035079 Quercus lobata HOM05D004241 ORTHO05D006031 3.3e-17 92.0 110 49.1
MSTRG.18996 Avicennia marina HOM05D004241 ORTHO05D006031 4.3e-17 91.7 110 48.2
Dinv04461 Davidia involucrata HOM05D004241 ORTHO05D006031 4.3e-17 91.7 110 48.2
Dinv05780 Davidia involucrata HOM05D004241 ORTHO05D006031 4.3e-17 91.7 110 48.2
Lsat_1_v5_gn_8_101501 Lactuca sativa HOM05D004241 ORTHO05D006031 4.3e-17 91.7 110 49.1
Nn2g10892 Nelumbo nucifera HOM05D004241 ORTHO05D006031 4.3e-17 91.7 110 48.2
TAR633G2528 Trochodendron aralioides HOM05D004241 ORTHO05D006031 4.3e-17 91.7 110 47.3
Rhsim04G0126500 Rhododendron simsii HOM05D004241 ORTHO05D006031 5.6e-17 91.3 110 48.2
Potri.016G119400 Populus trichocarpa HOM05D004241 ORTHO05D006031 7.3e-17 90.9 110 47.3
Hund14874 Selenicereus undatus HOM05D004241 ORTHO05D006031 7.3e-17 90.9 110 47.3
AagrBONN_evm.TU.Sc2ySwM_228.1146 Anthoceros agrestis HOM05D004241 ORTHO05D006031 9.5e-17 90.5 109 49.5
AUR62030480 Chenopodium quinoa HOM05D004241 ORTHO05D006031 9.5e-17 90.5 49 87.8
Mapoly0045s0080 Marchantia polymorpha HOM05D004241 ORTHO05D006031 1.2e-16 90.1 110 47.3
Sabra16G0115300 Salix brachista HOM05D004241 ORTHO05D006031 1.2e-16 90.1 110 47.3
A02p27320 Brassica napus HOM05D004241 ORTHO05D018769 2.8e-16 89.0 63 74.6
FAN14G4537 Fragaria x ananassa HOM05D004241 ORTHO05D006031 2.8e-16 89.0 49 87.8
Ah.12g058810 Amaranthus hybridus HOM05D004241 ORTHO05D006031 3.6e-16 88.6 110 46.4
Haze_21025 Corylus avellana HOM05D004241 ORTHO05D006031 3.6e-16 88.6 49 85.7
vmacro08889 Vaccinium macrocarpon HOM05D004241 ORTHO05D006031 3.6e-16 88.6 109 46.8
COL.COLO4_03385 Corchorus olitorius HOM05D004241 ORTHO05D006031 1.1e-15 87.0 49 81.6
arahy.Tifrunner.gnm1.ann1.IR2XKV Arachis hypogaea HOM05D004241 ORTHO05D006031 1.4e-15 86.7 47 89.4
Cre06.g294750 Chlamydomonas reinhardtii HOM05D004241 ORTHO05D006031 1.4e-15 86.7 108 47.2
MCO16G058 Micromonas commoda HOM05D004241 ORTHO05D006031 1.4e-15 86.7 109 47.7
Lj2C71T11 Lonicera japonica HOM05D004241 ORTHO05D006031 4.0e-15 85.1 49 83.7
Duzib093G0784 Durio zibethinus HOM05D004241 ORTHO05D006031 1.2e-14 83.6 49 77.6
Pp3c13_13830 Physcomitrium patens HOM05D004241 ORTHO05D006031 2.0e-14 82.8 109 45.9
PSO339G4053 Papaver somniferum HOM05D004241 ORTHO05D006031 3.4e-14 82.0 110 41.8
CDE04G2983 Ceratophyllum demersum HOM05D004241 ORTHO05D006031 5.8e-14 81.3 110 42.7
arahy.Tifrunner.gnm1.ann1.F5Z0S5 Arachis hypogaea HOM05D004241 ORTHO05D006031 9.8e-14 80.5 110 43.6
Aqoxy4G02498 Aquilegia oxysepala HOM05D004241 ORTHO05D006031 1.7e-13 79.7 110 40.9
PSO384G4055 Papaver somniferum HOM05D004241 ORTHO05D006031 1.7e-13 79.7 109 41.3
CBR_g38410 Chara braunii HOM05D004241 ORTHO05D006031 2.2e-13 79.3 48 77.1
arahy.Tifrunner.gnm1.ann1.YJ5G8U Arachis hypogaea HOM05D004241 ORTHO05D006031 4.9e-13 78.2 116 41.4
A09p61840 Brassica napus HOM05D004241 ORTHO05D018769 3.2e-12 75.5 42 90.5
vmacro08890 Vaccinium macrocarpon HOM05D004241 ORTHO05D006031 7.8e-11 70.9 86 50.0
PRCOL_00003234 Prasinoderma coloniale HOM05D004241 ORTHO05D006031 1.7e-10 69.7 48 66.7


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