Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p54520 Brassica napus HOM05D007886 ORTHO05D010538 5.4e-130 467.6 230 100.0
BcaC04g19546 Brassica carinata HOM05D007886 ORTHO05D010538 4.8e-126 454.5 232 97.0
BcaB08g36450 Brassica carinata HOM05D007886 ORTHO05D010538 4.2e-98 361.7 210 86.2
BraA10t43943Z Brassica rapa HOM05D007886 ORTHO05D010538 2.1e-97 359.4 220 83.6
BolC9t58319H Brassica oleracea HOM05D007886 ORTHO05D010538 9.1e-85 317.4 156 100.0
A10p18650 Brassica napus HOM05D007886 ORTHO05D010538 4.7e-81 305.1 158 96.2
BraA10t43942Z Brassica rapa HOM05D007886 ORTHO05D010538 5.3e-77 291.6 232 67.2
A10p18630 Brassica napus HOM05D007886 ORTHO05D010538 3.5e-76 288.9 232 65.9
BcaC04g19554 Brassica carinata HOM05D007886 ORTHO05D010538 8.0e-73 277.7 232 64.7
BolC9t58314H Brassica oleracea HOM05D007886 ORTHO05D010538 2.7e-68 262.7 218 65.1
Thhalv10016045m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 1.2e-52 210.7 204 53.9
C09p54450 Brassica napus HOM05D007886 ORTHO05D010538 1.1e-50 204.1 218 54.6
BcaB01g04738 Brassica carinata HOM05D007886 ORTHO05D010538 1.5e-50 203.8 208 53.4
Thhalv10015608m.g Eutrema salsugineum HOM05D007886 ORTHO05D010538 7.3e-50 201.4 160 61.2
BcaB01g04725 Brassica carinata HOM05D007886 ORTHO05D010538 6.2e-49 198.4 210 51.0
BcaC01g06599 Brassica carinata HOM05D007886 ORTHO05D010538 8.0e-49 198.0 213 52.1
BcaB01g04722 Brassica carinata HOM05D007886 ORTHO05D010538 5.8e-47 191.8 207 52.2
BcaB01g04728 Brassica carinata HOM05D007886 ORTHO05D010538 3.2e-45 186.0 205 50.2
BcaB01g04729 Brassica carinata HOM05D007886 ORTHO05D010538 2.7e-44 183.0 205 48.8
BcaB01g04735 Brassica carinata HOM05D007886 ORTHO05D010538 2.7e-44 183.0 205 48.8
BcaB04g20726 Brassica carinata HOM05D007886 ORTHO05D010538 1.3e-43 180.6 204 49.5
AL6G33140 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 6.6e-43 178.3 223 44.4
BolC3t13694H Brassica oleracea HOM05D007886 ORTHO05D010538 2.1e-41 173.3 155 59.4
BcaB01g04732 Brassica carinata HOM05D007886 ORTHO05D010538 8.1e-41 171.4 196 51.0
A03p10620 Brassica napus HOM05D007886 ORTHO05D010538 8.1e-41 171.4 155 58.1
BraA03t10374Z Brassica rapa HOM05D007886 ORTHO05D010538 8.1e-41 171.4 155 58.1
C03p12210 Brassica napus HOM05D007886 ORTHO05D010538 1.8e-40 170.2 157 58.0
Carub.0006s1989 Capsella rubella HOM05D007886 ORTHO05D010538 1.3e-38 164.1 227 42.3
Carub.0006s1981 Capsella rubella HOM05D007886 ORTHO05D010538 3.7e-38 162.5 223 46.2
AL6G33180 Arabidopsis lyrata HOM05D007886 ORTHO05D017386 2.7e-36 156.4 235 43.4
Carub.0006s1983 Capsella rubella HOM05D007886 ORTHO05D017386 4.6e-36 155.6 235 43.8
CARHR191360 Cardamine hirsuta HOM05D007886 ORTHO05D017386 4.0e-32 142.5 228 41.2
Carub.0006s1987 Capsella rubella HOM05D007886 ORTHO05D010538 3.4e-31 139.4 178 46.1
AL6G33190 Arabidopsis lyrata HOM05D007886 ORTHO05D010538 6.4e-30 135.2 159 42.8
AT5G22170 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 6.4e-30 135.2 224 39.7
AT5G22150 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 8.4e-30 134.8 156 46.8
Carub.0006s1990 Capsella rubella HOM05D007886 ORTHO05D010538 8.4e-30 134.8 149 52.3
Carub.0006s1985 Capsella rubella HOM05D007886 ORTHO05D010538 1.9e-29 133.7 228 38.6
Carub.0006s1992 Capsella rubella HOM05D007886 ORTHO05D017386 9.2e-29 131.3 231 39.8
AT5G22160 Arabidopsis thaliana HOM05D007886 ORTHO05D010538 9.9e-23 111.3 154 44.8
BraA10t43940Z Brassica rapa HOM05D007886 ORTHO05D017386 8.4e-22 108.2 229 34.5
A10p18610 Brassica napus HOM05D007886 ORTHO05D017386 1.1e-21 107.8 229 34.1
AL5G22320 Arabidopsis lyrata HOM05D007886 ORTHO05D038549 9.0e-16 88.2 192 33.9
AL6G33160 Arabidopsis lyrata HOM05D007886 ORTHO05D017386 3.8e-14 82.8 228 32.0
BcaB01g04734 Brassica carinata HOM05D007886 ORTHO05D096238 1.1e-13 81.3 93 50.5
AT3G44235 Arabidopsis thaliana HOM05D007886 ORTHO05D038549 1.2e-12 77.8 185 35.1
AT5G22190 Arabidopsis thaliana HOM05D007886 ORTHO05D017386 1.8e-11 73.9 123 37.4
BcaC04g19556 Brassica carinata HOM05D007886 ORTHO05D017386 4.0e-08 62.8 115 36.5


User provided reference genes

Program Settings