Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-77 292.7 137 100.0
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-76 288.9 136 98.5
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-75 286.2 137 97.8
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-74 282.3 136 95.6
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 4.8e-73 277.7 136 94.1
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 4.8e-73 277.7 136 94.1
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 9.9e-71 270.0 136 92.6
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-70 269.6 136 93.4
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 6.4e-70 267.3 136 92.6
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-68 262.3 136 91.9
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.9e-58 229.2 151 72.2
C04p39160 Brassica napus HOM05D004128 ORTHO05D008395 3.3e-58 228.4 114 95.6
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 7.4e-58 227.3 108 98.1
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 7.6e-55 217.2 108 93.5
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 3.8e-54 214.9 151 68.2
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 4.2e-53 211.5 157 64.3
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 9.3e-53 210.3 101 97.0
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 3.0e-51 205.3 102 93.1
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 2.5e-50 202.2 102 92.2
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 6.3e-49 197.6 142 66.9
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 3.8e-46 188.3 130 69.2
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 3.8e-46 188.3 130 69.2
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 5.1e-35 151.4 127 57.5
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 4.4e-34 148.3 104 67.3
BraA05t21895Z Brassica rapa HOM05D004128 ORTHO05D008395 4.2e-29 131.7 65 95.4
Aa31LG10G9040 Aethionema arabicum HOM05D003554 ORTHO05D005130 5.5e-29 131.3 125 48.0
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 1.3e-25 120.2 154 41.6
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 6.3e-25 117.9 151 37.7
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 5.3e-24 114.8 151 40.4
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 9.1e-24 114.0 64 81.2
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 2.0e-23 112.8 129 41.9
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 2.6e-23 112.5 64 79.7
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-23 111.7 64 79.7
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 7.7e-23 110.9 64 79.7
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-22 110.5 64 79.7
Carub.0004s0685 Capsella rubella HOM05D003554 ORTHO05D005130 1.0e-22 110.5 134 41.8
BcaC03g16254 Brassica carinata HOM05D003554 ORTHO05D005130 1.7e-22 109.8 132 38.6
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 2.9e-22 109.0 155 36.8
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 2.9e-22 109.0 64 76.6
Aa31sc111G40 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.8e-22 108.6 132 40.9
Aa31LG11G8070 Aethionema arabicum HOM05D003554 ORTHO05D005130 6.5e-22 107.8 127 45.7
C02p33250 Brassica napus HOM05D003554 ORTHO05D005130 1.1e-21 107.1 141 37.6
AL2G17330 Arabidopsis lyrata HOM05D003554 ORTHO05D008395 3.2e-21 105.5 148 38.5
Aa31sc129G60 Aethionema arabicum HOM05D003554 ORTHO05D005130 5.5e-21 104.8 141 37.6
BcaB02g10637 Brassica carinata HOM05D003554 ORTHO05D005130 1.2e-20 103.6 125 37.6
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 1.2e-20 103.6 133 37.6
BcaB03g16128 Brassica carinata HOM05D003554 ORTHO05D005130 1.6e-20 103.2 154 37.0
BcaB05g23503 Brassica carinata HOM05D003554 ORTHO05D008395 1.6e-20 103.2 128 39.8
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 1.6e-20 103.2 133 37.6
BcaB02g11541 Brassica carinata HOM05D003554 ORTHO05D005130 2.1e-20 102.8 154 35.7
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 3.6e-20 102.1 149 38.3
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 3.6e-20 102.1 149 38.3
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 6.1e-20 101.3 133 38.3
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 8.0e-20 100.9 133 38.3
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 1.0e-19 100.5 133 36.8
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 1.0e-19 100.5 133 39.1
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 2.3e-19 99.4 133 39.1
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 4.0e-19 98.6 51 90.2
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 6.8e-19 97.8 49 91.8
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-18 97.1 48 93.8
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 3.4e-18 95.5 84 60.7
BcaB01g01280 Brassica carinata HOM05D003554 ORTHO05D005130 5.7e-18 94.7 155 34.2
BcaB04g17410 Brassica carinata HOM05D003554 ORTHO05D005130 7.5e-18 94.4 138 37.0
Carub.0003s3367 Capsella rubella HOM05D003554 ORTHO05D005130 7.5e-18 94.4 115 39.1
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 9.7e-18 94.0 131 37.4
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 4.1e-16 88.6 43 93.0
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 4.1e-16 88.6 74 51.4
BcaB08g35391 Brassica carinata HOM05D003554 ORTHO05D005130 9.1e-16 87.4 134 33.6
BolC3t13324H Brassica oleracea HOM05D003554 ORTHO05D008395 1.2e-15 87.0 151 33.1
Aa31sc347G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.6e-15 86.7 123 38.2
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-15 86.7 57 71.9
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 2.0e-15 86.3 77 53.2
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-15 86.3 57 71.9
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 2.7e-15 85.9 54 74.1
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 3.5e-15 85.5 67 53.7
Aa31sc538G10 Aethionema arabicum HOM05D003554 ORTHO05D008395 5.9e-15 84.7 129 36.4
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 7.7e-15 84.3 57 70.2
Aa31LG6G10050 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.0e-14 84.0 141 38.3
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 1.7e-14 83.2 54 72.2
BcaC08g42899 Brassica carinata HOM05D003554 ORTHO05D005130 2.2e-14 82.8 134 31.3
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 2.9e-14 82.4 100 42.0
BcaB08g35337 Brassica carinata HOM05D003554 ORTHO05D005130 3.8e-14 82.0 118 36.4
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 3.8e-14 82.0 100 42.0
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 3.8e-14 82.0 54 68.5
BcaB07g31822 Brassica carinata HOM05D003554 ORTHO05D032345 5.0e-14 81.6 138 33.3
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 5.0e-14 81.6 46 80.4
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 8.5e-14 80.9 121 36.4
Aa31sc454G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.5e-13 79.3 104 38.5
BolC3t19531H Brassica oleracea HOM05D003554 ORTHO05D005130 2.5e-13 79.3 104 36.5
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 1.2e-12 77.0 48 70.8
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 1.2e-12 77.0 48 70.8
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 1.2e-12 77.0 48 70.8
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 1.2e-12 77.0 58 63.8
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 1.2e-12 77.0 58 63.8
BcaB01g02862 Brassica carinata HOM05D003554 ORTHO05D005130 1.6e-12 76.6 109 33.9
Carub.0002s1014 Capsella rubella HOM05D003554 ORTHO05D005130 1.6e-12 76.6 154 33.1
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 2.7e-12 75.9 48 70.8
THA.LOC109116752 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.7e-12 75.9 137 33.6
BcaC01g00876 Brassica carinata HOM05D004128 ORTHO05D008395 3.6e-12 75.5 38 92.1
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 4.7e-12 75.1 58 62.1
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 4.7e-12 75.1 58 62.1
BcaB02g11366 Brassica carinata HOM05D007984 ORTHO05D013027 8.0e-12 74.3 138 31.9
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 8.0e-12 74.3 50 68.0
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-11 73.9 33 97.0
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 1.0e-11 73.9 33 97.0
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 1.8e-11 73.2 48 66.7
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 2.3e-11 72.8 33 93.9
C03p76590 Brassica napus HOM05D008062 ORTHO05D011707 3.0e-11 72.4 56 53.6
BolC9t53917H Brassica oleracea HOM05D008062 ORTHO05D011707 3.0e-11 72.4 56 53.6
BraA05t20613Z Brassica rapa HOM05D008062 ORTHO05D008395 3.0e-11 72.4 56 53.6
C02p14940 Brassica napus HOM05D008316 ORTHO05D021631 4.0e-11 72.0 86 39.5
Aa31LG1G6440 Aethionema arabicum HOM05D003554 ORTHO05D005130 5.2e-11 71.6 90 40.0
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 6.8e-11 71.2 33 93.9
BcaB05g24479 Brassica carinata HOM05D008316 ORTHO05D017243 8.8e-11 70.9 77 45.5
BolC3t17148H Brassica oleracea HOM05D014471 ORTHO05D017646 8.8e-11 70.9 101 38.6
Aa31sc137G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.2e-10 70.5 42 69.0
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-10 70.5 33 90.9
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-10 70.1 43 69.8
C02p57980 Brassica napus HOM05D017905 ORTHO05D017243 2.0e-10 69.7 85 41.2
BcaB06g26193 Brassica carinata HOM05D003554 ORTHO05D014926 3.4e-10 68.9 105 36.2
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 7.5e-10 67.8 66 50.0
Aa31LG6G9990 Aethionema arabicum HOM05D003554 ORTHO05D005130 9.8e-10 67.4 90 40.0
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 9.8e-10 67.4 33 87.9
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 1.3e-09 67.0 58 58.6
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 1.3e-09 67.0 64 56.2
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 1.3e-09 67.0 64 56.2
THA.LOC109116427 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.7e-09 66.6 151 29.8
BcaC01g04710 Brassica carinata HOM05D008825 ORTHO05D013031 2.2e-09 66.2 56 48.2
BcaB04g17902 Brassica carinata HOM05D003554 ORTHO05D005130 3.7e-09 65.5 127 29.9
Carub.0002s1016 Capsella rubella HOM05D003554 ORTHO05D005130 3.7e-09 65.5 152 31.6
Aa31sc182G60 Aethionema arabicum HOM05D003554 ORTHO05D008395 6.3e-09 64.7 121 33.1
BraA09t38864Z Brassica rapa HOM05D003554 ORTHO05D017243 8.3e-09 64.3 56 48.2
BcaB03g16118 Brassica carinata HOM05D003554 ORTHO05D005130 1.4e-08 63.5 119 31.9
Aa31LG10G9030 Aethionema arabicum HOM05D003554 ORTHO05D008395 1.8e-08 63.2 92 35.9
BcaC01g01745 Brassica carinata HOM05D003554 ORTHO05D014926 1.8e-08 63.2 106 32.1
BcaC08g45828 Brassica carinata HOM05D003554 ORTHO05D014926 2.4e-08 62.8 101 32.7
THA.LOC104821166 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.1e-08 62.0 132 30.3
THA.LOC104811336 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.4e-08 61.6 144 28.5
BcaC04g20884 Brassica carinata HOM05D009532 ORTHO05D013511 7.0e-08 61.2 69 40.6
THA.LOC104807864 Tarenaya hassleriana HOM05D003554 ORTHO05D015748 9.1e-08 60.8 127 31.5
C08p07220 Brassica napus HOM05D008316 ORTHO05D017243 1.6e-07 60.1 56 46.4
THA.LOC104807874 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.6e-07 60.1 127 29.1
Aa31sc318G10 Aethionema arabicum HOM05D028239 ORTHO05D005130 2.0e-07 59.7 36 66.7
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-07 59.7 34 73.5
BcaC08g43125 Brassica carinata HOM05D009532 ORTHO05D013511 2.0e-07 59.7 69 39.1
THA.LOC104799670 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.0e-07 59.7 121 30.6
BcaB02g11054 Brassica carinata HOM05D009532 ORTHO05D005130 2.7e-07 59.3 67 40.3
BcaB03g16082 Brassica carinata HOM05D026233 ORTHO05D005130 3.5e-07 58.9 58 48.3
THA.LOC104803192 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.5e-07 58.9 127 28.3
BolC6t37270H Brassica oleracea HOM05D004128 ORTHO05D008395 4.5e-07 58.5 48 56.2
THA.LOC104823081 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.5e-07 58.5 151 29.1
C05p06190 Brassica napus HOM05D003554 ORTHO05D005130 5.9e-07 58.2 35 57.1
BcaC01g02197 Brassica carinata HOM05D003554 ORTHO05D014926 1.0e-06 57.4 101 30.7
BcaC08g45909 Brassica carinata HOM05D003554 ORTHO05D014926 1.7e-06 56.6 99 31.3
Aa31LG7G10730 Aethionema arabicum HOM05D003554 ORTHO05D008395 2.3e-06 56.2 100 35.0
Thhalv10023867m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.9e-06 55.8 46 50.0
AT5G24275 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 3.8e-06 55.5 54 40.7
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 3.8e-06 55.5 49 46.9
BcaC02g10903 Brassica carinata HOM05D004128 ORTHO05D013239 5.0e-06 55.1 29 86.2
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 5.0e-06 55.1 37 62.2
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 5.0e-06 55.1 49 44.9
THA.LOC104825259 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.0e-06 55.1 82 36.6
Aa31LG9G11090 Aethionema arabicum HOM05D011111 ORTHO05D001112 6.6e-06 54.7 72 36.1
C02p40540 Brassica napus HOM05D007984 ORTHO05D014515 8.6e-06 54.3 75 40.0


User provided reference genes

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