Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p52640 Brassica napus HOM05D006507 ORTHO05D007296 0.0e+00 2290.4 1210 100.0
BolC9t58131H Brassica oleracea HOM05D006507 ORTHO05D007296 0.0e+00 2248.0 1212 98.7
A10p17300 Brassica napus HOM05D006507 ORTHO05D007296 0.0e+00 2134.4 1256 90.8
BraA10t43814Z Brassica rapa HOM05D006507 ORTHO05D007296 0.0e+00 2092.0 1210 92.2
Sp6g21800 Schrenkiella parvula HOM05D006507 ORTHO05D007296 0.0e+00 1499.6 1289 67.6
Thhalv10012478m.g Eutrema salsugineum HOM05D006507 ORTHO05D007296 0.0e+00 1382.5 1278 63.0
AL8G36760 Arabidopsis lyrata HOM05D006507 ORTHO05D007296 0.0e+00 1172.5 1340 54.5
CARHR273800 Cardamine hirsuta HOM05D006507 ORTHO05D007296 0.0e+00 1136.7 1359 53.9
AT5G60150 Arabidopsis thaliana HOM05D006507 ORTHO05D007296 0.0e+00 1127.9 1340 53.6
Carub.0008s2088 Capsella rubella HOM05D006507 ORTHO05D007296 0.0e+00 1107.8 1334 53.1
THA.LOC104810833 Tarenaya hassleriana HOM05D006507 ORTHO05D007296 6.3e-185 652.5 1362 37.6
Aa31LG1G12330 Aethionema arabicum HOM05D006507 ORTHO05D007296 5.9e-143 513.1 1328 34.6
Gorai.001G129300 Gossypium raimondii HOM05D006507 ORTHO05D007296 1.2e-53 216.5 1410 24.6
Duzib170G0831 Durio zibethinus HOM05D006507 ORTHO05D007296 7.5e-53 213.8 1427 25.8
Thecc.09G262500 Theobroma cacao HOM05D006507 ORTHO05D007296 3.7e-52 211.5 1478 24.4
Gohir.D07G120101 Gossypium hirsutum HOM05D006507 ORTHO05D007296 1.8e-51 209.1 1429 24.8
COL.COLO4_25271 Corchorus olitorius HOM05D006507 ORTHO05D007296 7.0e-51 207.2 1419 26.1
Cfa011382 Carpinus fangiana HOM05D006507 ORTHO05D007296 4.2e-48 198.0 1381 25.9
Gohir.A07G115600 Gossypium hirsutum HOM05D006507 ORTHO05D007296 8.0e-47 193.7 1291 24.0
Atru.chr3.3722 Acer truncatum HOM05D006507 ORTHO05D007296 3.4e-45 188.3 1397 26.8
CSS0009997 Camellia sinensis var. sinensis HOM05D006507 ORTHO05D007296 2.4e-43 182.2 1321 26.6
TWI79G0725 Tripterygium wilfordii HOM05D006507 ORTHO05D007296 6.5e-41 174.1 1348 25.5
PGR102G3212 Punica granatum HOM05D006507 ORTHO05D007296 4.7e-39 167.9 1349 24.0
Atru.chr3.3727 Acer truncatum HOM05D006507 ORTHO05D007296 1.5e-37 162.9 1565 24.2
Manes.11G139900 Manihot esculenta HOM05D006507 ORTHO05D007296 2.0e-37 162.5 1532 24.1
DCAR_006032 Daucus carota HOM05D006507 ORTHO05D007296 6.6e-33 147.5 1246 25.9
TAR633G2802 Trochodendron aralioides HOM05D006507 ORTHO05D007296 5.6e-32 144.4 1271 25.3
QL01p036413 Quercus lobata HOM05D006507 ORTHO05D007296 9.5e-32 143.7 521 31.9
CiPaw.13G105600 Carya illinoinensis HOM05D006507 ORTHO05D007296 5.7e-29 134.4 513 31.2
MELO3C025723.2 Cucumis melo HOM05D006507 ORTHO05D007296 9.8e-29 133.7 1453 23.5
ClCG02G020740 Citrullus lanatus HOM05D006507 ORTHO05D007296 2.9e-28 132.1 1445 23.5
BcaB05g22624 Brassica carinata HOM05D006507 ORTHO05D007296 3.7e-28 131.7 117 61.5
CANSAT54G2524 Cannabis sativa HOM05D006507 ORTHO05D007296 1.8e-27 129.4 1482 23.7
arahy.Tifrunner.gnm1.ann1.NP2AMW Arachis hypogaea HOM05D006507 ORTHO05D007296 7.0e-27 127.5 1380 24.1
Cpa.g.sc139.58 Carica papaya HOM05D006507 ORTHO05D007296 7.0e-27 127.5 210 41.4
arahy.Tifrunner.gnm1.ann1.M2HQ4Q Arachis hypogaea HOM05D006507 ORTHO05D007296 1.2e-26 126.7 1371 24.1
Aqoxy2G01879 Aquilegia oxysepala HOM05D006507 ORTHO05D007296 1.6e-26 126.3 1186 23.5
Dinv32808 Davidia involucrata HOM05D006507 ORTHO05D007296 1.6e-26 126.3 99 65.7
Rhsim13G0091300 Rhododendron simsii HOM05D006507 ORTHO05D007296 3.5e-26 125.2 1313 25.0
Ciclev10027733m.g Citrus clementina HOM05D006507 ORTHO05D007296 7.8e-26 124.0 145 46.2
Haze_23947 Corylus avellana HOM05D006507 ORTHO05D007296 1.0e-25 123.6 646 27.2
FAN16G3496 Fragaria x ananassa HOM05D006507 ORTHO05D007296 2.3e-25 122.5 1381 23.6
Cpa.g.sc139.57 Carica papaya HOM05D006507 ORTHO05D007296 5.0e-25 121.3 76 72.4
SalBow3G2105 Salvia bowleyana HOM05D006507 ORTHO05D007296 6.6e-25 120.9 1226 23.2
ECA238G2561 Erigeron canadensis HOM05D006507 ORTHO05D007296 4.3e-24 118.2 117 55.6
FAN11G1966 Fragaria x ananassa HOM05D006507 ORTHO05D007296 1.6e-23 116.3 1396 24.7
Sabra05G0106900 Salix brachista HOM05D006507 ORTHO05D007296 2.1e-23 115.9 151 46.4
Solyc06g075420.1 Solanum lycopersicum HOM05D006507 ORTHO05D007296 2.8e-23 115.5 129 51.9
MD03G1109500 Malus domestica HOM05D006507 ORTHO05D007296 4.7e-23 114.8 121 52.1
RcHm_v2.0_Chr5g0061361 Rosa chinensis HOM05D006507 ORTHO05D007296 4.7e-23 114.8 102 58.8
Glyma.12G072900 Glycine max HOM05D006507 ORTHO05D007296 6.2e-23 114.4 97 59.8
PSO384G3963 Papaver somniferum HOM05D006507 ORTHO05D007296 1.4e-22 113.2 69 75.4
Sc21g0000130 Simmondsia chinensis HOM05D006507 ORTHO05D007296 3.1e-22 112.1 1400 24.1
Prupe.6G092200 Prunus persica HOM05D006507 ORTHO05D007296 4.0e-22 111.7 229 36.2
RcHm_v2.0_Chr5g0061351 Rosa chinensis HOM05D006507 ORTHO05D007296 4.0e-22 111.7 204 41.2
Glyma.11G150661 Glycine max HOM05D006507 ORTHO05D007296 5.2e-22 111.3 73 71.2
SGA_v2.0_scaffold80G25739 Striga asiatica HOM05D006507 ORTHO05D007296 5.2e-22 111.3 66 75.8
vmacro03159 Vaccinium macrocarpon HOM05D006507 ORTHO05D007296 6.8e-22 110.9 97 56.7
HanXRQChr06g0183281 Helianthus annuus HOM05D006507 ORTHO05D007296 8.9e-22 110.5 245 33.5
PSO339G6510 Papaver somniferum HOM05D006507 ORTHO05D007296 1.2e-21 110.2 69 72.5
Actinidia08403 Actinidia chinensis HOM05D006507 ORTHO05D007296 1.5e-21 109.8 68 76.5
Potri.005G131500 Populus trichocarpa HOM05D006507 ORTHO05D007296 1.5e-21 109.8 1349 23.6
Actinidia24071 Actinidia chinensis HOM05D006507 ORTHO05D007296 2.0e-21 109.4 1282 23.4
VMungo1127G1622 Vigna mungo HOM05D006507 ORTHO05D007296 2.0e-21 109.4 98 58.2
MSTRG.12615 Avicennia marina HOM05D006507 ORTHO05D007296 3.4e-21 108.6 1195 24.1
Ca_19235_v3 Cicer arietinum L. HOM05D006507 ORTHO05D007296 7.5e-21 107.5 1367 23.0
Lalb_Chr19g0137501 Lupinus albus HOM05D006507 ORTHO05D007296 7.5e-21 107.5 110 52.7
SEGI_16529 Sequoiadendron giganteum HOM05D006507 ORTHO05D007296 1.3e-20 106.7 72 66.7
CAN.G1001.2 Capsicum annuum HOM05D006507 ORTHO05D007296 2.2e-20 105.9 129 46.5
Lj3g0018374 Lotus japonicus HOM05D006507 ORTHO05D007296 6.4e-20 104.4 92 56.5
Migut.N02633 Erythranthe guttata HOM05D006507 ORTHO05D007296 1.4e-19 103.2 309 31.7
Nitab4.5_0000270g0010 Nicotiana tabacum HOM05D006507 ORTHO05D007296 3.2e-19 102.1 1371 23.2
HPP92_026984 Vanilla planifolia HOM05D006507 ORTHO05D007296 4.1e-19 101.7 68 70.6
Lsat_1_v5_gn_2_25380 Lactuca sativa HOM05D006507 ORTHO05D007296 1.6e-18 99.8 84 61.9
HPP92_015411 Vanilla planifolia HOM05D006507 ORTHO05D007296 2.0e-18 99.4 68 69.1
Psat7g223080 Pisum sativum HOM05D006507 ORTHO05D007296 2.7e-18 99.0 141 45.4
AUR62025040 Chenopodium quinoa HOM05D006507 ORTHO05D007296 4.6e-18 98.2 185 37.8
GSVIVG01025113001 Vitis vinifera HOM05D038408 ORTHO05D007296 4.6e-18 98.2 1219 22.8
BcaB05g22625 Brassica carinata HOM05D006507 ORTHO05D007296 6.0e-18 97.8 88 64.8
AUR62006495 Chenopodium quinoa HOM05D006507 ORTHO05D007296 1.0e-17 97.1 513 25.0
Os12g0102700 Oryza sativa ssp. japonica HOM05D006507 ORTHO05D007296 3.0e-17 95.5 127 43.3
Sopen06g031820 Solanum pennellii HOM05D006507 ORTHO05D007296 3.9e-17 95.1 1247 23.8
Oeu022272.1 Olea europaea HOM05D006507 ORTHO05D007296 8.6e-17 94.0 1239 22.8
PGSC0003DMG400007499 Solanum tuberosum HOM05D006507 ORTHO05D007296 1.1e-16 93.6 1246 23.1
Sed0026220 Sechium edule HOM05D006507 ORTHO05D007296 4.3e-16 91.7 1354 23.1
CsaV3_6G021880 Cucumis sativus L. HOM05D006507 ORTHO05D007296 1.2e-15 90.1 1391 22.1
FvH4_3g33790 Fragaria vesca HOM05D006507 ORTHO05D007296 1.6e-15 89.7 299 34.8
Medtr4g061110 Medicago truncatula HOM05D006507 ORTHO05D007296 6.2e-15 87.8 445 25.8
Actinidia07103 Actinidia chinensis HOM05D006507 ORTHO05D007296 8.1e-15 87.4 62 64.5
FAN21G2403 Fragaria x ananassa HOM05D006507 ORTHO05D007296 8.1e-15 87.4 221 34.4
Hma1.2p1_2156F.1_g315450 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 1.1e-14 87.0 94 54.3
EL10Ac9g22402 Beta vulgaris HOM05D006507 ORTHO05D007296 3.1e-14 85.5 1151 22.2
vmacro03160 Vaccinium macrocarpon HOM05D006507 ORTHO05D007296 2.0e-13 82.8 294 35.0
HanXRQChr06g0183291 Helianthus annuus HOM05D006507 ORTHO05D007296 4.4e-13 81.6 202 37.1
Cc01_g11720 Coffea canephora HOM05D006507 ORTHO05D007296 5.8e-13 81.3 1228 23.0
Lj2A1039T65 Lonicera japonica HOM05D006507 ORTHO05D007296 7.5e-13 80.9 712 24.6
Lalb_Chr19g0137491 Lupinus albus HOM05D006507 ORTHO05D007296 8.3e-12 77.4 158 38.6
Hma1.2p1_0840F.1_g226520 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 2.4e-11 75.9 54 61.1
Nn2g12985 Nelumbo nucifera HOM05D006507 ORTHO05D007296 2.4e-11 75.9 275 32.7
MD03G1109700 Malus domestica HOM05D006507 ORTHO05D007296 4.1e-11 75.1 137 40.9
Pp3c16_7200 Physcomitrium patens HOM05D034648 ORTHO05D007296 4.1e-11 75.1 118 41.5
ATR1159G075 Amborella trichopoda HOM05D006507 ORTHO05D007296 1.2e-10 73.6 43 72.1
AagrBONN_evm.TU.Sc2ySwM_368.2680 Anthoceros agrestis HOM05D006507 ORTHO05D007296 1.2e-10 73.6 98 40.8
CAN.G1001.3 Capsicum annuum HOM05D006507 ORTHO05D007296 1.6e-10 73.2 86 53.5
Psat7g223120 Pisum sativum HOM05D006507 ORTHO05D007296 4.6e-10 71.6 230 34.8
CANSAT54G0008 Cannabis sativa HOM05D006507 ORTHO05D007296 6.0e-10 71.2 402 29.9
Solyc06g075410.4 Solanum lycopersicum HOM05D006507 ORTHO05D007296 1.7e-09 69.7 137 37.2
TPR.G2995 Trifolium pratense HOM05D006507 ORTHO05D007296 5.1e-09 68.2 1524 22.2
Nitab4.5_0001698g0050 Nicotiana tabacum HOM05D006507 ORTHO05D007296 6.6e-09 67.8 1393 21.8
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 6.6e-09 67.8 97 42.3
Mapoly0001s0188 Marchantia polymorpha HOM05D006507 ORTHO05D007296 1.5e-08 66.6 61 55.7
Sopen02g037960 Solanum pennellii HOM05D006507 ORTHO05D007296 4.3e-08 65.1 94 46.8
CBR_g19214 Chara braunii HOM05D006507 ORTHO05D007296 2.8e-07 62.4 103 40.8
Peaxi162Scf00072g00227 Petunia axillaris HOM05D006507 ORTHO05D007296 6.2e-07 61.2 124 37.9
Sopen02g037950 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-07 60.8 195 35.4
Migut.N02632 Erythranthe guttata HOM05D006507 ORTHO05D007296 1.4e-06 60.1 185 33.5
Peaxi162Scf00072g00226 Petunia axillaris HOM05D006507 ORTHO05D007296 4.0e-06 58.5 79 44.3
Potri.016G085600 Populus trichocarpa HOM05D003265 ORTHO05D003819 4.0e-06 58.5 173 34.1


User provided reference genes

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