Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p52570 Brassica napus HOM05D002350 ORTHO05D042275 2.1e-115 419.1 213 100.0
BolC9t58123H Brassica oleracea HOM05D002350 ORTHO05D042275 6.0e-91 337.8 179 97.8
BcaC04g19659 Brassica carinata HOM05D002350 ORTHO05D000091 8.1e-88 327.4 169 100.0
A10p17220 Brassica napus HOM05D002350 ORTHO05D000091 1.4e-60 236.9 169 78.7
BraA10t43806Z Brassica rapa HOM05D002350 ORTHO05D000091 6.1e-59 231.5 169 77.5
A09p59080 Brassica napus HOM05D002350 ORTHO05D000091 3.2e-52 209.1 175 67.4
BcaC07g41231 Brassica carinata HOM05D002350 ORTHO05D000091 9.4e-52 207.6 175 67.4
BolC8t51797H Brassica oleracea HOM05D002350 ORTHO05D000091 6.1e-51 204.9 175 67.4
C08p42360 Brassica napus HOM05D002350 ORTHO05D000091 2.3e-50 203.0 175 66.3
BraA09t41291Z Brassica rapa HOM05D002350 ORTHO05D000091 5.2e-50 201.8 175 66.3
BcaB08g34892 Brassica carinata HOM05D002350 ORTHO05D000091 5.5e-44 181.8 175 62.9
Thhalv10001896m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 7.0e-31 138.3 166 56.6
AT2G19920 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 1.9e-28 130.2 174 52.3
Carub.0003s3417 Capsella rubella HOM05D002350 ORTHO05D000091 1.0e-26 124.4 184 48.9
AL3G48290 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 1.8e-26 123.6 166 51.2
BolC7t40580H Brassica oleracea HOM05D002350 ORTHO05D000091 2.0e-25 120.2 170 48.8
AT2G19910 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 3.4e-25 119.4 157 53.5
Aa31LG8G16870 Aethionema arabicum HOM05D002350 ORTHO05D000091 4.4e-25 119.0 163 49.7
BraA07t27873Z Brassica rapa HOM05D002350 ORTHO05D000091 4.9e-24 115.5 174 47.1
A07p00750 Brassica napus HOM05D002350 ORTHO05D000091 8.3e-24 114.8 170 48.2
BcaC06g36656 Brassica carinata HOM05D002350 ORTHO05D000091 1.1e-23 114.4 170 47.6
AL3G48310 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 2.4e-23 113.2 165 50.3
C07p01760 Brassica napus HOM05D002350 ORTHO05D000091 5.4e-23 112.1 170 47.1
Sp3g33240 Schrenkiella parvula HOM05D002350 ORTHO05D000091 9.2e-23 111.3 156 51.3
AT2G19930 Arabidopsis thaliana HOM05D002350 ORTHO05D000091 3.0e-21 106.3 163 46.6
AL3G48270 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 5.0e-21 105.5 167 46.7
Thhalv10001897m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 6.6e-21 105.1 173 48.0
CARHR110370 Cardamine hirsuta HOM05D002350 ORTHO05D000091 2.8e-19 99.8 166 45.8
BcaB03g16778 Brassica carinata HOM05D002350 ORTHO05D000091 6.2e-19 98.6 172 40.7
THA.LOC104808318 Tarenaya hassleriana HOM05D002350 ORTHO05D000091 1.0e-18 97.8 167 43.7
BcaB03g16779 Brassica carinata HOM05D002350 ORTHO05D000091 1.5e-17 94.0 158 43.7
Carub.0003s3418 Capsella rubella HOM05D002350 ORTHO05D000091 7.0e-15 85.1 166 42.8
BraA07t27876Z Brassica rapa HOM05D002350 ORTHO05D000091 2.0e-14 83.6 162 40.1
BcaC06g36654 Brassica carinata HOM05D002350 ORTHO05D000091 3.5e-14 82.8 160 40.0
BolC7t40582H Brassica oleracea HOM05D002350 ORTHO05D000091 3.5e-14 82.8 160 40.0
C07p01790 Brassica napus HOM05D002350 ORTHO05D000091 4.6e-14 82.4 160 40.0
A07p00780 Brassica napus HOM05D002350 ORTHO05D000091 7.8e-14 81.6 166 39.8
BcaC06g36662 Brassica carinata HOM05D002350 ORTHO05D000091 2.5e-12 76.6 154 41.6
BolC7t40573H Brassica oleracea HOM05D002350 ORTHO05D000091 3.3e-12 76.3 152 42.1
A07p00720 Brassica napus HOM05D002350 ORTHO05D000091 5.6e-12 75.5 151 41.1
BraA07t27871Z Brassica rapa HOM05D002350 ORTHO05D000091 5.6e-12 75.5 151 41.1
BcaC07g40432 Brassica carinata HOM05D000032 ORTHO05D004701 2.2e-08 63.5 135 40.7
Potri.007G081300 Populus trichocarpa HOM05D002350 ORTHO05D000091 1.6e-06 57.4 161 31.7
GSVIVG01015313001 Vitis vinifera HOM05D002350 ORTHO05D000091 2.1e-06 57.0 149 30.2


User provided reference genes

Program Settings