Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p52110 Brassica napus HOM05D004375 ORTHO05D027250 2.0e-118 429.1 217 100.0
BolC9t58077H Brassica oleracea HOM05D004375 ORTHO05D027250 6.9e-58 228.0 116 98.3
BcaB08g35442 Brassica carinata HOM05D004375 ORTHO05D008558 5.5e-39 165.2 102 77.5
A07p43390 Brassica napus HOM05D004375 ORTHO05D008558 1.1e-36 157.5 107 72.9
BcaB06g26129 Brassica carinata HOM05D004375 ORTHO05D016039 1.9e-36 156.8 102 73.5
BcaB01g03337 Brassica carinata HOM05D004375 ORTHO05D016039 2.5e-36 156.4 102 73.5
BcaC08g43054 Brassica carinata HOM05D004375 ORTHO05D016039 4.3e-36 155.6 88 79.5
BcaC01g06041 Brassica carinata HOM05D004375 ORTHO05D008558 9.6e-36 154.5 92 77.2
BraA09t39239Z Brassica rapa HOM05D004375 ORTHO05D008558 9.6e-36 154.5 92 76.1
BcaC03g15251 Brassica carinata HOM05D004375 ORTHO05D008558 4.8e-35 152.1 102 68.6
BcaC03g15252 Brassica carinata HOM05D004375 ORTHO05D008558 4.8e-35 152.1 102 68.6
BcaB02g10241 Brassica carinata HOM05D004375 ORTHO05D008558 6.2e-35 151.8 92 73.9
A03p67640 Brassica napus HOM05D004375 ORTHO05D008558 1.1e-34 151.0 102 64.7
BolC2t08885H Brassica oleracea HOM05D004375 ORTHO05D008558 1.1e-34 151.0 102 68.6
BcaB05g23011 Brassica carinata HOM05D004375 ORTHO05D008558 1.4e-34 150.6 102 67.6
BolC3t21361H Brassica oleracea HOM05D004375 ORTHO05D008558 1.4e-34 150.6 102 68.6
BcaB07g33031 Brassica carinata HOM05D004375 ORTHO05D008558 3.1e-34 149.4 102 66.7
C01p14320 Brassica napus HOM05D004375 ORTHO05D008558 3.1e-34 149.4 102 67.6
C07p19300 Brassica napus HOM05D004375 ORTHO05D008558 3.1e-34 149.4 102 67.6
BcaB01g04420 Brassica carinata HOM05D004375 ORTHO05D008558 1.5e-33 147.1 102 66.7
BcaC03g15201 Brassica carinata HOM05D004375 ORTHO05D008558 1.5e-33 147.1 102 65.7
C01p25790 Brassica napus HOM05D004375 ORTHO05D008558 1.5e-33 147.1 102 66.7
BcaB05g23867 Brassica carinata HOM05D004375 ORTHO05D008558 2.6e-33 146.4 92 70.7
BolC1t02527H Brassica oleracea HOM05D004375 ORTHO05D008558 2.6e-33 146.4 102 66.7
C02p27860 Brassica napus HOM05D004375 ORTHO05D008558 3.4e-33 146.0 102 65.7
C09p31570 Brassica napus HOM05D004375 ORTHO05D008558 3.4e-33 146.0 92 70.7
BolC2t08831H Brassica oleracea HOM05D004375 ORTHO05D008558 3.4e-33 146.0 102 65.7
BolC9t56012H Brassica oleracea HOM05D004375 ORTHO05D008558 3.4e-33 146.0 92 70.7
BcaB05g24369 Brassica carinata HOM05D004375 ORTHO05D000395 4.5e-33 145.6 102 65.7
BcaC03g14982 Brassica carinata HOM05D004375 ORTHO05D008558 5.8e-33 145.2 102 63.7
BcaB05g21909 Brassica carinata HOM05D004375 ORTHO05D008558 1.9e-31 140.2 92 67.4
BcaB06g26290 Brassica carinata HOM05D004375 ORTHO05D008558 1.9e-31 140.2 92 67.4
BcaB05g22559 Brassica carinata HOM05D004375 ORTHO05D008558 2.5e-31 139.8 92 66.3
BcaC03g14687 Brassica carinata HOM05D004375 ORTHO05D008558 7.1e-31 138.3 83 74.7
A04p02330 Brassica napus HOM05D004375 ORTHO05D008558 1.6e-30 137.1 92 67.4
BraA05t20802Z Brassica rapa HOM05D004375 ORTHO05D008558 2.7e-30 136.3 98 66.3
BcaB01g03413 Brassica carinata HOM05D004375 ORTHO05D000395 4.6e-30 135.6 92 66.3
BcaB03g16500 Brassica carinata HOM05D004375 ORTHO05D008558 7.9e-30 134.8 93 66.7
C03p10830 Brassica napus HOM05D004375 ORTHO05D008558 2.8e-27 126.3 92 64.1
BcaC09g50012 Brassica carinata HOM05D004375 ORTHO05D016090 1.5e-25 120.6 92 59.8
BcaB05g23103 Brassica carinata HOM05D004375 ORTHO05D008558 2.9e-24 116.3 92 59.8
BcaC02g10129 Brassica carinata HOM05D004375 ORTHO05D008558 2.9e-24 116.3 102 54.9
BcaB05g23703 Brassica carinata HOM05D004375 ORTHO05D008558 3.8e-24 115.9 102 53.9
C03p82430 Brassica napus HOM05D004375 ORTHO05D027250 3.8e-24 115.9 71 76.1
C09p70730 Brassica napus HOM05D004375 ORTHO05D008558 1.1e-23 114.4 92 55.4
BcaC05g26718 Brassica carinata HOM05D004375 ORTHO05D008558 1.0e-21 107.8 75 69.3
BcaB01g02236 Brassica carinata HOM05D004375 ORTHO05D008558 1.8e-21 107.1 96 55.2
BcaB01g03503 Brassica carinata HOM05D004375 ORTHO05D008558 3.7e-19 99.4 102 48.0
BcaB03g15947 Brassica carinata HOM05D004375 ORTHO05D008558 1.1e-18 97.8 102 50.0
BcaC03g14455 Brassica carinata HOM05D004375 ORTHO05D027250 2.4e-18 96.7 57 78.9
BcaC04g23067 Brassica carinata HOM05D004375 ORTHO05D008558 3.1e-18 96.3 67 59.7
BolC7t43340H Brassica oleracea HOM05D004375 ORTHO05D032088 6.9e-18 95.1 70 62.9
C05p15730 Brassica napus HOM05D004375 ORTHO05D028061 3.4e-17 92.8 52 80.8
BolC5t30279H Brassica oleracea HOM05D004375 ORTHO05D028061 3.4e-17 92.8 52 80.8
BcaC03g14060 Brassica carinata HOM05D004375 ORTHO05D024058 4.5e-17 92.4 92 47.8
BolC1t02944H Brassica oleracea HOM05D004375 ORTHO05D016090 7.7e-17 91.7 75 54.7
BolC2t07029H Brassica oleracea HOM05D004375 ORTHO05D008558 1.0e-16 91.3 67 64.2
C02p40620 Brassica napus HOM05D004375 ORTHO05D028061 5.0e-16 89.0 52 75.0
C06p19530 Brassica napus HOM05D004375 ORTHO05D008558 1.9e-15 87.0 52 75.0
BolC2t10082H Brassica oleracea HOM05D004375 ORTHO05D028061 1.9e-15 87.0 52 76.9
Thhalv10003015m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 4.2e-15 85.9 99 48.5
Thhalv10022419m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 7.9e-14 81.6 98 46.9
BolC2t07404H Brassica oleracea HOM05D020498 ORTHO05D027565 1.4e-13 80.9 64 54.7
Thhalv10015691m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.3e-13 80.1 98 45.9
Thhalv10002299m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 3.9e-13 79.3 98 45.9
Thhalv10023977m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 6.7e-13 78.6 98 45.9
Thhalv10000713m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 8.8e-13 78.2 98 44.9
BcaC06g35536 Brassica carinata HOM05D004375 ORTHO05D008558 1.7e-11 73.9 102 41.2
Thhalv10015533m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 6.3e-11 72.0 96 43.8
BolC9t58076H Brassica oleracea HOM05D004375 ORTHO05D106224 1.4e-10 70.9 37 97.3
BolC2t11145H Brassica oleracea HOM05D001038 ORTHO05D043146 5.3e-10 68.9 98 41.8
Thhalv10029276m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 4.5e-09 65.9 81 42.0
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 5.9e-09 65.5 103 40.8
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 5.9e-09 65.5 103 40.8
BcaC04g20539 Brassica carinata HOM05D030300 ORTHO05D032481 5.9e-09 65.5 91 41.8
BcaB08g34623 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-08 64.3 103 39.8
C01p40340 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-08 64.3 93 36.6
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-08 64.3 93 36.6
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-08 63.2 93 34.4
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 2.9e-08 63.2 93 36.6
BcaB08g34364 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-08 62.8 93 36.6
AL5G24460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 6.5e-08 62.0 103 38.8
BolC4t23574H Brassica oleracea HOM05D001038 ORTHO05D000395 6.5e-08 62.0 93 36.6
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 8.5e-08 61.6 93 35.5
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-07 61.2 105 37.1
BolC3t16968H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-07 61.2 88 37.5
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-07 61.2 105 37.1
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-07 60.8 98 38.8
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-07 60.5 93 34.4
BolC3t20321H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-07 60.5 88 38.6
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-07 59.7 101 37.6
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 4.2e-07 59.3 88 37.5
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 4.2e-07 59.3 88 37.5
C09p37810 Brassica napus HOM05D004375 ORTHO05D031763 4.2e-07 59.3 45 60.0
BolC9t56614H Brassica oleracea HOM05D004375 ORTHO05D031763 4.2e-07 59.3 45 60.0
CARHR034790 Cardamine hirsuta HOM05D001038 ORTHO05D000395 4.2e-07 59.3 96 35.4
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 7.2e-07 58.5 101 34.7
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 7.2e-07 58.5 98 36.7
C09p68940 Brassica napus HOM05D001038 ORTHO05D000395 7.2e-07 58.5 93 34.4
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 7.2e-07 58.5 104 33.7
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 7.2e-07 58.5 98 37.8
BraA04t16796Z Brassica rapa HOM05D001038 ORTHO05D000395 9.4e-07 58.2 94 36.2
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 9.4e-07 58.2 90 35.6
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-06 57.8 93 31.2
Carub.0004s3021 Capsella rubella HOM05D001285 ORTHO05D000199 1.2e-06 57.8 108 34.3
AL8G20830 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.6e-06 57.4 91 33.0
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-06 57.4 100 34.0
Thhalv10000594m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.6e-06 57.4 90 38.9
Thhalv10010916m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.6e-06 57.4 90 40.0
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-06 57.0 100 35.0
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-06 57.0 107 32.7
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-06 57.0 98 35.7
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-06 57.0 93 35.5
BcaNung02282 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-06 57.0 93 33.3
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-06 57.0 107 32.7
C09p42380 Brassica napus HOM05D004375 ORTHO05D027565 2.1e-06 57.0 42 54.8
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 2.1e-06 57.0 107 32.7
BolC7t44786H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-06 57.0 93 33.3
BolC9t57118H Brassica oleracea HOM05D004375 ORTHO05D027565 2.1e-06 57.0 42 54.8
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-06 56.6 98 33.7
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-06 56.6 98 33.7
Thhalv10015721m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.7e-06 56.6 90 38.9
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-06 55.8 106 32.1
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-06 55.8 98 32.7
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 4.7e-06 55.8 98 32.7
BraA04t18197Z Brassica rapa HOM05D001038 ORTHO05D000395 4.7e-06 55.8 91 38.5
BraA09t38530Z Brassica rapa HOM05D002776 ORTHO05D000395 4.7e-06 55.8 98 37.8
Thhalv10010966m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.7e-06 55.8 93 37.6
Thhalv10022987m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.7e-06 55.8 88 39.8
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 6.1e-06 55.5 98 33.7
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 6.1e-06 55.5 98 34.7
Thhalv10001852m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.1e-06 55.5 90 40.0
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 7.9e-06 55.1 98 32.7
Thhalv10002958m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.9e-06 55.1 90 38.9
Thhalv10005454m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.9e-06 55.1 90 38.9


User provided reference genes

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