Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 3.7e-239 831.2 455 100.0
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 9.5e-211 736.9 496 85.3
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 3.0e-204 715.3 474 87.3
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 1.5e-176 623.2 387 91.7
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 2.5e-158 562.8 403 79.9
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 3.6e-149 532.3 388 76.5
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 7.4e-147 524.6 387 76.2
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 9.7e-147 524.2 378 76.7
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 9.7e-147 524.2 380 75.3
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 9.7e-147 524.2 380 75.3
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 2.0e-144 516.5 382 75.9
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 6.7e-140 501.5 378 74.6
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 7.7e-136 488.0 377 71.4
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 1.5e-134 483.8 377 70.6
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 4.2e-134 482.3 380 74.7
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 4.7e-125 452.2 380 67.1
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 6.1e-109 398.7 381 57.7
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 1.5e-99 367.5 376 53.2
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 1.9e-97 360.5 377 51.7
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 5.4e-97 359.0 375 52.8
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 9.2e-97 358.2 382 50.5
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 3.5e-96 356.3 379 52.0
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 1.0e-95 354.8 373 53.4
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 2.5e-94 350.1 386 50.5
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.8e-93 346.7 398 48.7
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 3.6e-93 346.3 375 49.9
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 6.2e-93 345.5 402 48.3
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 8.1e-93 345.1 413 46.0
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.4e-92 344.4 388 46.9
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.8e-92 344.0 407 47.7
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 5.8e-91 339.0 376 48.9
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 1.7e-90 337.4 384 48.4
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 1.7e-90 337.4 380 48.2
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 6.4e-90 335.5 390 48.7
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 6.4e-90 335.5 378 50.3
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 2.4e-89 333.6 389 49.4
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 1.6e-88 330.9 392 48.5
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 2.7e-88 330.1 391 48.6
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 6.0e-88 328.9 383 48.6
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 1.0e-87 328.2 392 48.5
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 1.7e-87 327.4 391 47.6
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 1.1e-86 324.7 385 47.8
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 1.9e-86 323.9 383 47.8
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 3.6e-85 319.7 394 45.2
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 4.7e-85 319.3 392 44.4
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 4.7e-85 319.3 385 47.3
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 8.9e-84 315.1 378 46.3
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 1.2e-83 314.7 378 48.7
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 1.2e-83 314.7 482 40.0
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 4.4e-83 312.8 378 48.4
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 5.8e-83 312.4 376 47.3
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 7.6e-83 312.0 394 45.2
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 2.9e-82 310.1 395 44.6
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 3.8e-82 309.7 381 47.0
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 4.9e-82 309.3 382 46.9
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 5.4e-81 305.8 395 45.3
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 7.8e-80 302.0 383 47.0
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 7.3e-78 295.4 311 51.8
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 2.1e-77 293.9 381 43.0
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 6.2e-77 292.4 378 44.4
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 1.1e-76 291.6 410 41.7
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 9.0e-76 288.5 382 42.9
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 7.6e-75 285.4 379 44.6
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 1.1e-73 281.6 420 41.4
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 7.1e-73 278.9 348 48.6
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 9.3e-73 278.5 380 42.9
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 9.3e-73 278.5 407 42.0
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 1.2e-72 278.1 421 40.4
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 4.6e-72 276.2 429 38.9
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 7.8e-72 275.4 373 44.5
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 7.8e-72 275.4 417 41.5
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 1.0e-71 275.0 319 48.0
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 2.3e-71 273.9 401 42.9
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 8.7e-71 271.9 306 48.7
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 7.3e-70 268.9 440 39.3
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 2.9e-66 256.9 305 45.2
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 1.1e-65 255.0 282 49.3
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 3.2e-65 253.4 307 44.0
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 3.5e-64 250.0 312 45.5
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 1.0e-63 248.4 377 42.2
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 1.3e-63 248.1 330 43.3
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 6.7e-63 245.7 313 45.0
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 2.5e-62 243.8 322 43.8
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 2.6e-59 233.8 389 36.8
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.3e-58 231.5 334 43.7
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.3e-58 231.5 334 43.7
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 1.9e-54 217.6 379 36.7
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 1.1e-52 211.8 389 34.4
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 6.9e-52 209.1 313 41.9
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.0e-51 207.6 160 60.0
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 2.1e-48 197.6 309 40.5
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 1.0e-47 195.3 237 43.9
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 3.9e-47 193.4 237 43.5
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.4e-41 174.9 162 49.4
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 1.0e-39 168.7 147 51.7
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 2.3e-39 167.5 263 37.6
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 3.1e-36 157.1 426 29.8
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 1.5e-35 154.8 129 54.3
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 2.0e-27 127.9 302 33.4
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 2.3e-23 114.4 190 41.1
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 9.7e-22 109.0 114 51.8
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 1.1e-20 105.5 207 36.7
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 2.6e-19 100.9 363 27.0
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.1e-17 95.5 69 62.3
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.1e-17 95.5 69 62.3
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 1.8e-15 88.2 139 40.3
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 6.8e-15 86.3 187 35.8
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 8.3e-13 79.3 179 35.8
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 1.6e-11 75.1 166 36.1
Thhalv10015158m.g Eutrema salsugineum HOM05D017175 ORTHO05D018252 5.2e-07 60.1 61 62.3


User provided reference genes

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