Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 4.2e-44 181.0 96 100.0
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 3.2e-39 164.9 96 88.5
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 9.2e-39 163.3 96 89.6
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 1.2e-38 162.9 96 89.6
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 1.2e-38 162.9 96 88.5
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 2.0e-38 162.2 96 88.5
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 2.7e-38 161.8 96 87.5
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 3.5e-38 161.4 94 88.3
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 4.5e-38 161.0 94 88.3
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 4.5e-38 161.0 96 87.5
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 1.7e-37 159.1 94 88.3
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 1.7e-37 159.1 94 89.4
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 1.7e-37 159.1 94 89.4
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 2.1e-35 152.1 95 82.1
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 1.3e-32 142.9 92 76.1
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 4.9e-32 141.0 92 76.1
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 1.9e-31 139.0 94 81.9
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 1.9e-31 139.0 92 75.0
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 1.9e-31 139.0 92 75.0
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 3.2e-31 138.3 92 73.9
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 5.4e-31 137.5 92 72.8
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 9.2e-31 136.7 92 73.9
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 9.2e-31 136.7 92 75.0
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 2.0e-30 135.6 91 72.5
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 3.5e-30 134.8 90 74.4
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 3.5e-30 134.8 92 70.7
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 4.6e-30 134.4 92 72.8
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 6.0e-30 134.0 92 71.7
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 6.0e-30 134.0 92 75.0
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 7.8e-30 133.7 91 71.4
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 7.8e-30 133.7 90 73.3
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 7.8e-30 133.7 91 70.3
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 7.8e-30 133.7 91 71.4
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 7.8e-30 133.7 92 75.0
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 1.0e-29 133.3 153 54.9
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 1.3e-29 132.9 92 71.7
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 1.3e-29 132.9 92 69.6
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.3e-29 132.9 91 71.4
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 1.3e-29 132.9 92 70.7
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 1.7e-29 132.5 90 73.3
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 1.7e-29 132.5 91 72.5
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 1.7e-29 132.5 92 71.7
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.0e-29 131.7 91 69.2
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 3.9e-29 131.3 92 71.7
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 3.9e-29 131.3 95 68.4
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 5.0e-29 131.0 90 73.3
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 5.0e-29 131.0 90 70.0
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 5.0e-29 131.0 92 69.6
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 6.6e-29 130.6 90 71.1
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 1.1e-28 129.8 92 69.6
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 1.1e-28 129.8 92 70.7
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 1.1e-28 129.8 92 70.7
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.1e-28 129.8 91 70.3
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 1.1e-28 129.8 94 70.2
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.9e-28 129.0 92 68.5
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 1.9e-28 129.0 91 70.3
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 1.9e-28 129.0 92 70.7
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 1.9e-28 129.0 90 70.0
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 2.5e-28 128.6 92 69.6
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 3.3e-28 128.3 91 71.4
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 3.3e-28 128.3 91 69.2
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 5.6e-28 127.5 92 68.5
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 7.3e-28 127.1 90 70.0
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 7.3e-28 127.1 90 71.1
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 7.3e-28 127.1 91 68.1
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 9.5e-28 126.7 92 67.4
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.2e-27 126.3 92 64.1
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 2.1e-27 125.6 90 68.9
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 2.1e-27 125.6 92 67.4
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 2.1e-27 125.6 93 67.7
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 2.8e-27 125.2 92 68.5
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 2.8e-27 125.2 92 68.5
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 3.6e-27 124.8 92 70.7
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 6.2e-27 124.0 92 67.4
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 6.2e-27 124.0 89 71.9
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 1.4e-26 122.9 92 66.3
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 2.3e-26 122.1 92 66.3
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 3.1e-26 121.7 91 62.6
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 3.1e-26 121.7 92 65.2
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 4.0e-26 121.3 89 68.5
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 4.0e-26 121.3 92 66.3
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 8.9e-26 120.2 94 66.0
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 8.9e-26 120.2 92 64.1
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 2.6e-25 118.6 93 64.5
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 5.8e-25 117.5 90 65.6
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 7.5e-25 117.1 89 67.4
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 9.8e-25 116.7 92 63.0
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 1.7e-24 115.9 92 62.0
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 2.2e-24 115.5 92 60.9
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 2.9e-24 115.2 92 63.0
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 9.2e-23 110.2 76 71.1
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 3.5e-22 108.2 76 69.7
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 3.5e-22 108.2 76 71.1
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 6.0e-22 107.5 91 59.3
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 1.7e-21 105.9 76 71.1
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 1.7e-21 105.9 76 72.4
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 2.3e-21 105.5 80 67.5
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 3.0e-21 105.1 75 69.3
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 1.5e-20 102.8 91 56.0
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.9e-20 102.4 92 56.5
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 5.6e-20 100.9 75 65.3
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 3.6e-19 98.2 93 60.2
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 6.2e-19 97.4 56 92.9
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 8.1e-19 97.1 78 61.5
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 2.3e-18 95.5 74 63.5
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 6.8e-18 94.0 74 62.2
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 3.4e-17 91.7 75 66.7
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 3.4e-17 91.7 64 68.8
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 9.9e-17 90.1 90 54.4
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 2.2e-16 89.0 73 60.3
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 4.1e-15 84.7 64 65.6
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 2.7e-14 82.0 78 56.4
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 2.3e-13 79.0 100 48.0
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 1.5e-12 76.3 87 47.1
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 1.1e-10 70.1 62 59.7
BraA10t43605Z Brassica rapa HOM05D006914 ORTHO05D008583 8.9e-10 67.0 34 100.0
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 7.6e-09 63.9 87 41.4
BolC9t57826H Brassica oleracea HOM05D006914 ORTHO05D008583 3.8e-08 61.6 30 93.3
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 4.9e-08 61.2 86 46.5
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 1.9e-07 59.3 37 75.7


User provided reference genes

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