Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p49510 Brassica napus HOM05D004175 ORTHO05D004664 3.7e-97 358.6 236 100.0
BolC2t08664H Brassica oleracea HOM05D004175 ORTHO05D004664 2.7e-92 342.4 232 89.2
C05p31230 Brassica napus HOM05D004175 ORTHO05D004664 3.5e-92 342.0 202 89.1
C03p72980 Brassica napus HOM05D004175 ORTHO05D004664 4.6e-92 341.7 202 89.1
C03p57560 Brassica napus HOM05D004175 ORTHO05D004664 8.2e-89 330.9 202 93.6
C02p31840 Brassica napus HOM05D004175 ORTHO05D004664 1.3e-86 323.6 203 95.1
BcaC01g02078 Brassica carinata HOM05D004175 ORTHO05D004664 8.4e-86 320.9 232 82.3
C07p36980 Brassica napus HOM05D004175 ORTHO05D004664 1.0e-83 313.9 217 96.8
BolC3t18031H Brassica oleracea HOM05D004175 ORTHO05D004664 1.5e-82 310.1 168 97.6
BNapus_Darmor_BZH_scaffold_38p02220 Brassica napus HOM05D004175 ORTHO05D004664 4.8e-73 278.5 204 86.8
BcaC04g19364 Brassica carinata HOM05D004175 ORTHO05D004664 3.4e-71 272.3 175 84.6
BcaC03g13699 Brassica carinata HOM05D004175 ORTHO05D004664 1.3e-70 270.4 175 93.1
A02p05730 Brassica napus HOM05D004175 ORTHO05D004664 5.0e-70 268.5 175 92.6
BraA02t05525Z Brassica rapa HOM05D004175 ORTHO05D004664 5.0e-70 268.5 175 92.6
BcaB05g23410 Brassica carinata HOM05D004175 ORTHO05D004664 1.1e-69 267.3 174 83.9
BraA10t44078Z Brassica rapa HOM05D004175 ORTHO05D004664 1.9e-69 266.5 204 85.3
A10p20040 Brassica napus HOM05D004175 ORTHO05D004664 7.2e-69 264.6 204 84.8
BolC9t58515H Brassica oleracea HOM05D004175 ORTHO05D004664 7.2e-69 264.6 204 84.3
Thhalv10014089m.g Eutrema salsugineum HOM05D004175 ORTHO05D004664 9.4e-69 264.2 174 82.2
BcaC04g19363 Brassica carinata HOM05D004175 ORTHO05D004664 1.8e-67 260.0 204 83.3
BcaC04g19365 Brassica carinata HOM05D004175 ORTHO05D004664 3.9e-67 258.8 204 83.8
C09p56500 Brassica napus HOM05D004175 ORTHO05D004664 3.9e-67 258.8 204 83.8
Sp6g24700 Schrenkiella parvula HOM05D004175 ORTHO05D004664 6.7e-67 258.1 175 87.4
Carub.0006s1803 Capsella rubella HOM05D004175 ORTHO05D004664 5.7e-66 255.0 174 78.2
AT5G19680 Arabidopsis thaliana HOM05D004175 ORTHO05D004664 7.4e-66 254.6 174 77.6
AL6G31190 Arabidopsis lyrata HOM05D004175 ORTHO05D004664 1.1e-64 250.8 174 78.2
CARHR193230 Cardamine hirsuta HOM05D004175 ORTHO05D004664 2.2e-62 243.0 168 78.6
Prupe.7G222100 Prunus persica HOM05D004175 ORTHO05D004664 3.2e-61 239.2 219 73.1
Atru.chr7.1440 Acer truncatum HOM05D004175 ORTHO05D004664 6.7e-59 231.5 175 72.6
Aa31LG1G8760 Aethionema arabicum HOM05D004175 ORTHO05D004664 1.1e-58 230.7 204 82.8
BolC7t44210H Brassica oleracea HOM05D004175 ORTHO05D004664 2.6e-58 229.6 122 100.0
BcaC06g33783 Brassica carinata HOM05D004175 ORTHO05D004664 3.3e-58 229.2 144 96.5
Lsat_1_v5_gn_5_143861 Lactuca sativa HOM05D004175 ORTHO05D004664 1.7e-57 226.9 175 70.9
C01p01530 Brassica napus HOM05D004175 ORTHO05D004664 3.7e-57 225.7 150 84.0
Cpa.g.sc40.51 Carica papaya HOM05D004175 ORTHO05D004664 4.8e-57 225.3 175 78.3
Ciclev10008855m.g Citrus clementina HOM05D004175 ORTHO05D004664 4.8e-57 225.3 204 72.1
CiPaw.03G226400 Carya illinoinensis HOM05D004175 ORTHO05D004664 1.1e-56 224.2 190 73.2
VMungo0251G2778 Vigna mungo HOM05D004175 ORTHO05D004664 1.8e-56 223.4 219 59.4
FAN26G0873 Fragaria x ananassa HOM05D004175 ORTHO05D004664 4.1e-56 222.2 175 77.1
FAN26G2762 Fragaria x ananassa HOM05D004175 ORTHO05D004664 4.1e-56 222.2 175 77.1
FAN28G2614 Fragaria x ananassa HOM05D004175 ORTHO05D004664 4.1e-56 222.2 175 77.1
FvH4_1g05880 Fragaria vesca HOM05D004175 ORTHO05D004664 9.1e-56 221.1 175 78.3
MD15G1194400 Malus domestica HOM05D004175 ORTHO05D004664 1.2e-55 220.7 175 77.7
FAN23G2598 Fragaria x ananassa HOM05D004175 ORTHO05D004664 4.5e-55 218.8 175 77.1
Thecc.09G102700 Theobroma cacao HOM05D004175 ORTHO05D004664 1.0e-54 217.6 175 76.6
CANSAT56G2035 Cannabis sativa HOM05D004175 ORTHO05D004664 1.7e-54 216.9 175 76.6
CSS0007429 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 2.9e-54 216.1 175 73.1
CSS0045871 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 2.9e-54 216.1 175 73.1
Duzib168G0201 Durio zibethinus HOM05D004175 ORTHO05D004664 2.9e-54 216.1 175 75.4
Lj3g0019618 Lotus japonicus HOM05D004175 ORTHO05D004664 2.9e-54 216.1 190 62.6
BcaC01g02978 Brassica carinata HOM05D004175 ORTHO05D004664 3.8e-54 215.7 236 64.0
Medtr8g102770 Medicago truncatula HOM05D004175 ORTHO05D004664 3.8e-54 215.7 175 67.4
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 5.0e-54 215.3 174 65.5
DCAR_012049 Daucus carota HOM05D004175 ORTHO05D004664 6.5e-54 214.9 174 65.5
HanXRQChr10g0318361 Helianthus annuus HOM05D004175 ORTHO05D004664 6.5e-54 214.9 174 70.1
Gohir.A06G066500 Gossypium hirsutum HOM05D004175 ORTHO05D004664 8.5e-54 214.5 175 74.3
Sc08g0007900 Simmondsia chinensis HOM05D004175 ORTHO05D004664 1.1e-53 214.2 175 74.9
Cc06_g10300 Coffea canephora HOM05D004175 ORTHO05D004664 1.5e-53 213.8 204 68.1
COL.COLO4_34774 Corchorus olitorius HOM05D004175 ORTHO05D004664 1.5e-53 213.8 139 79.1
Dinv36699 Davidia involucrata HOM05D004175 ORTHO05D004664 1.5e-53 213.8 181 68.5
Nn8g39121 Nelumbo nucifera HOM05D004175 ORTHO05D004664 1.5e-53 213.8 174 73.6
ECA247G2452 Erigeron canadensis HOM05D004175 ORTHO05D004664 2.5e-53 213.0 175 66.3
Gohir.D06G065000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 5.5e-53 211.8 175 73.7
Sabra18G0074500 Salix brachista HOM05D004175 ORTHO05D004664 5.5e-53 211.8 174 75.9
vmacro10860 Vaccinium macrocarpon HOM05D004175 ORTHO05D004664 7.2e-53 211.5 175 73.1
Actinidia09442 Actinidia chinensis HOM05D001936 ORTHO05D002296 9.4e-53 211.1 175 73.7
Potri.018G086200 Populus trichocarpa HOM05D004175 ORTHO05D004664 1.6e-52 210.3 189 72.0
THA.LOC104811087 Tarenaya hassleriana HOM05D004175 ORTHO05D004664 1.6e-52 210.3 174 75.3
Hund09241 Selenicereus undatus HOM05D004175 ORTHO05D004664 2.7e-52 209.5 175 64.0
Glyma.08G034700 Glycine max HOM05D004175 ORTHO05D004664 3.6e-52 209.1 189 70.9
Duzib187G1630 Durio zibethinus HOM05D004175 ORTHO05D004664 4.7e-52 208.8 175 73.1
Gohir.A13G195800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 4.7e-52 208.8 174 73.6
Manes.16G110500 Manihot esculenta HOM05D004175 ORTHO05D004664 8.0e-52 208.0 189 71.4
RcHm_v2.0_Chr2g0091621 Rosa chinensis HOM05D004175 ORTHO05D004664 8.0e-52 208.0 189 72.5
C04p04320 Brassica napus HOM05D004175 ORTHO05D004664 1.0e-51 207.6 173 76.3
ClCG11G002240 Citrullus lanatus HOM05D004175 ORTHO05D004664 1.8e-51 206.8 189 72.0
BcaC03g15042 Brassica carinata HOM05D004175 ORTHO05D004664 2.3e-51 206.5 144 82.6
Gohir.D13G201000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 4.0e-51 205.7 174 72.4
Gorai.010G076100 Gossypium raimondii HOM05D004175 ORTHO05D004664 4.0e-51 205.7 170 74.1
Gorai.013G229800 Gossypium raimondii HOM05D004175 ORTHO05D004664 4.0e-51 205.7 174 72.4
PSO210G6864 Papaver somniferum HOM05D004175 ORTHO05D004664 5.2e-51 205.3 204 63.7
Sopen05g014800 Solanum pennellii HOM05D004175 ORTHO05D004664 5.2e-51 205.3 175 72.6
ECA234G4006 Erigeron canadensis HOM05D004175 ORTHO05D004664 6.8e-51 204.9 174 71.8
CAN.G274.4 Capsicum annuum HOM05D004175 ORTHO05D004664 1.5e-50 203.8 175 71.4
Nn2g11614 Nelumbo nucifera HOM05D004175 ORTHO05D004664 1.5e-50 203.8 204 75.0
Aqoxy7G03896 Aquilegia oxysepala HOM05D004175 ORTHO05D004664 2.0e-50 203.4 204 64.7
CsaV3_2G001990 Cucumis sativus L. HOM05D004175 ORTHO05D004664 2.6e-50 203.0 174 74.1
MD02G1060900 Malus domestica HOM05D004175 ORTHO05D004664 3.4e-50 202.6 219 61.2
Solyc05g018150.3 Solanum lycopersicum HOM05D004175 ORTHO05D004664 3.4e-50 202.6 175 72.0
SGA_v2.0_scaffold10G05161 Striga asiatica HOM05D004175 ORTHO05D004664 3.4e-50 202.6 175 67.4
MELO3C004581.2 Cucumis melo HOM05D004175 ORTHO05D004664 5.7e-50 201.8 188 70.7
Eucgr.C03782 Eucalyptus grandis HOM05D004175 ORTHO05D004664 5.7e-50 201.8 175 73.7
CDE02G1631 Ceratophyllum demersum HOM05D004175 ORTHO05D004664 7.5e-50 201.4 174 73.0
Ah.14g083210 Amaranthus hybridus HOM05D004175 ORTHO05D004664 1.3e-49 200.7 174 73.0
CAN.G525.1 Capsicum annuum HOM05D004175 ORTHO05D004664 1.3e-49 200.7 175 72.6
Peaxi162Scf00001g00131 Petunia axillaris HOM05D004175 ORTHO05D004664 2.2e-49 199.9 175 71.4
TAR383G0226 Trochodendron aralioides HOM05D004175 ORTHO05D004664 2.2e-49 199.9 175 70.3
MBI04_g40471_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 4.8e-49 198.7 175 71.4
PSO210G7624 Papaver somniferum HOM05D004175 ORTHO05D004664 8.3e-49 198.0 204 66.7
Haze_25808 Corylus avellana HOM05D004175 ORTHO05D004664 1.1e-48 197.6 219 57.1
ATR0705G211 Amborella trichopoda HOM05D004175 ORTHO05D004664 1.8e-48 196.8 174 65.5
Sed0003540 Sechium edule HOM05D004175 ORTHO05D004664 1.8e-48 196.8 174 71.8
Glyma.05G227700 Glycine max HOM05D004175 ORTHO05D004664 2.4e-48 196.4 190 67.4
GSVIVG01015319001 Vitis vinifera HOM05D004175 ORTHO05D004664 3.1e-48 196.1 175 69.7
TWI32G1108 Tripterygium wilfordii HOM05D004175 ORTHO05D004664 4.1e-48 195.7 225 64.4
arahy.Tifrunner.gnm1.ann1.2Q2DTK Arachis hypogaea HOM05D004175 ORTHO05D004664 9.1e-48 194.5 175 68.0
arahy.Tifrunner.gnm1.ann1.5M1SBB Arachis hypogaea HOM05D004175 ORTHO05D004664 9.1e-48 194.5 175 68.0
Cfa003199 Carpinus fangiana HOM05D004175 ORTHO05D004664 1.2e-47 194.1 219 60.7
Oeu000358.1 Olea europaea HOM05D004175 ORTHO05D004664 1.2e-47 194.1 174 65.5
Migut.J01107 Erythranthe guttata HOM05D004175 ORTHO05D004664 2.0e-47 193.4 175 69.1
Phvul.002G310000 Phaseolus vulgaris HOM05D004175 ORTHO05D004664 2.0e-47 193.4 190 61.1
Potri.006G163900 Populus trichocarpa HOM05D004175 ORTHO05D004664 2.7e-47 193.0 195 65.6
Oeu017825.1 Olea europaea HOM05D004175 ORTHO05D004664 3.5e-47 192.6 174 69.0
Lalb_Chr05g0223141 Lupinus albus HOM05D004175 ORTHO05D004664 4.5e-47 192.2 204 57.8
MSTRG.6019 Avicennia marina HOM05D004175 ORTHO05D004664 5.0e-46 188.7 174 68.4
Ca_17354_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 6.5e-46 188.3 190 56.8
Ca_29618_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 6.5e-46 188.3 190 56.8
SGA_v2.0_scaffold62G21556 Striga asiatica HOM05D004175 ORTHO05D004664 3.2e-45 186.0 175 69.1
Psat7g016360 Pisum sativum HOM05D004175 ORTHO05D004664 4.2e-45 185.7 175 69.1
Zm00001eb204970 Zea mays HOM05D004175 ORTHO05D004664 4.0e-43 179.1 175 64.6
Os02g0230100 Oryza sativa ssp. japonica HOM05D004175 ORTHO05D004664 5.2e-43 178.7 172 65.7
RcHm_v2.0_Chr2g0091541 Rosa chinensis HOM05D004175 ORTHO05D004664 8.8e-43 177.9 189 56.6
BolC3t19136H Brassica oleracea HOM05D004175 ORTHO05D004664 2.2e-41 173.3 139 77.0
QL02p042164 Quercus lobata HOM05D004175 ORTHO05D004664 1.1e-40 171.0 175 56.6
SHI11434 Sapria himalayana HOM05D004175 ORTHO05D004664 4.5e-39 165.6 206 50.0
Rhsim05G0041300 Rhododendron simsii HOM05D004175 ORTHO05D004664 7.7e-39 164.9 184 51.1
A07p01400 Brassica napus HOM05D004175 ORTHO05D004664 1.2e-36 157.5 113 90.3
Hund26252 Selenicereus undatus HOM05D004175 ORTHO05D004664 1.6e-36 157.1 174 51.1
FAN19G1571 Fragaria x ananassa HOM05D004175 ORTHO05D004664 6.1e-36 155.2 204 51.5
Nitab4.5_0000012g0030 Nicotiana tabacum HOM05D004175 ORTHO05D004664 2.6e-34 149.8 139 59.7
MBI04_g06580_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 2.9e-33 146.4 109 69.7
Gorai.001G184800 Gossypium raimondii HOM05D004175 ORTHO05D004664 6.4e-33 145.2 114 74.6
Mapoly0051s0012 Marchantia polymorpha HOM05D004175 ORTHO05D004664 1.4e-32 144.1 176 47.2
BraA03t14262Z Brassica rapa HOM05D004175 ORTHO05D004664 1.8e-32 143.7 107 91.6
Pp3c1_38690 Physcomitrium patens HOM05D004175 ORTHO05D004664 7.0e-32 141.7 175 49.1
EL10Ac8g18403 Beta vulgaris HOM05D004175 ORTHO05D004664 1.2e-31 141.0 175 48.0
Lalb_Chr09g0331471 Lupinus albus HOM05D004175 ORTHO05D004664 3.5e-31 139.4 197 52.3
Nitab4.5_0003199g0020 Nicotiana tabacum HOM05D004175 ORTHO05D004664 3.5e-31 139.4 103 68.9
SMO337G0008 Selaginella moellendorffii HOM05D004175 ORTHO05D004664 1.7e-30 137.1 180 52.8
TPR.G23501 Trifolium pratense HOM05D004175 ORTHO05D004664 2.3e-30 136.7 190 47.4
unitig_26.g8970 Utricularia gibba HOM05D004175 ORTHO05D004664 6.6e-30 135.2 105 63.8
Glyma.08G276800 Glycine max HOM05D004175 ORTHO05D004664 1.6e-28 130.6 154 53.2
Lj7A662T62 Lonicera japonica HOM05D004175 ORTHO05D004664 5.2e-27 125.6 114 72.8
SEGI_33191 Sequoiadendron giganteum HOM05D004175 ORTHO05D004664 1.5e-26 124.0 105 59.0
CBR_g36965 Chara braunii HOM05D004175 ORTHO05D004664 1.7e-25 120.6 175 50.3
Gorai.009G408400 Gossypium raimondii HOM05D004175 ORTHO05D004664 5.4e-24 115.5 109 73.4
MD03G1179500 Malus domestica HOM05D004175 ORTHO05D004664 7.0e-24 115.2 155 54.2
AagrBONN_evm.TU.Sc2ySwM_117.1201 Anthoceros agrestis HOM05D004175 ORTHO05D004664 1.1e-21 107.8 103 53.4
Pp3c2_9120 Physcomitrium patens HOM05D004175 ORTHO05D004664 4.7e-20 102.4 104 51.0
FAN10G1780 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.2e-17 93.6 75 68.0
FAN10G3383 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.2e-17 93.6 75 68.0
FAN10G3778 Fragaria x ananassa HOM05D004175 ORTHO05D004664 4.9e-17 92.4 75 66.7
Cre05.g234655 Chlamydomonas reinhardtii HOM05D004175 ORTHO05D004664 4.1e-16 89.4 134 41.8
FAN10G2625 Fragaria x ananassa HOM05D004175 ORTHO05D004664 5.1e-14 82.4 68 66.2
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 7.3e-13 78.6 91 54.9
FvH4_5g23601 Fragaria vesca HOM05D004175 ORTHO05D045656 1.1e-11 74.7 69 62.3
C03p68800 Brassica napus HOM05D004175 ORTHO05D004664 6.8e-11 72.0 56 64.3
PRCOL_00004941 Prasinoderma coloniale HOM05D004175 ORTHO05D004664 8.9e-11 71.6 141 36.9
FAN28G1141 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.2e-10 71.2 68 58.8
FAN20G2587 Fragaria x ananassa HOM05D000366 ORTHO05D000437 3.4e-10 69.7 70 57.1
FAN19G2726 Fragaria x ananassa HOM05D004175 ORTHO05D004664 4.9e-09 65.9 62 58.1
FvH4_3g18060 Fragaria vesca HOM05D004175 ORTHO05D004664 6.4e-09 65.5 81 50.6
Gohir.D04G104800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.7e-06 57.4 56 75.0


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