Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 2.6e-97 358.6 169 100.0
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.3e-96 356.3 167 100.0
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 9.0e-90 333.6 169 94.7
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 1.2e-89 333.2 169 94.1
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 4.5e-89 331.3 169 93.5
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 4.5e-89 331.3 169 93.5
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.0e-88 330.1 169 93.5
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.0e-88 330.1 169 92.9
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 1.3e-88 329.7 169 92.3
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 2.9e-88 328.6 169 92.3
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 1.1e-87 326.6 169 91.1
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 2.7e-86 322.0 169 89.3
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 1.3e-85 319.7 169 89.9
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 7.4e-76 287.3 169 78.1
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 1.4e-74 283.1 170 78.2
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 4.1e-74 281.6 169 75.1
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 3.4e-73 278.5 169 74.0
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 4.5e-73 278.1 169 74.6
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 4.5e-73 278.1 169 75.1
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 7.7e-73 277.3 170 76.5
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.3e-72 276.6 170 76.5
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.3e-72 276.6 168 72.6
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.7e-72 276.2 169 72.2
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.8e-72 275.0 169 72.2
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 5.0e-72 274.6 169 72.8
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 5.0e-72 274.6 164 76.8
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 6.5e-72 274.2 162 75.9
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 8.5e-72 273.9 167 73.7
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 8.5e-72 273.9 169 72.8
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.4e-71 273.1 156 80.1
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.4e-71 273.1 169 71.0
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.9e-71 272.7 166 73.5
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.9e-71 272.7 169 72.8
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.5e-71 272.3 167 74.9
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 2.5e-71 272.3 167 74.9
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 2.5e-71 272.3 169 74.0
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 4.2e-71 271.6 169 72.8
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 9.4e-71 270.4 167 74.3
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 9.4e-71 270.4 167 71.9
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.2e-70 270.0 169 71.6
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.6e-70 269.6 166 72.3
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.7e-70 268.9 166 72.3
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 2.7e-70 268.9 167 70.7
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 2.7e-70 268.9 166 71.1
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 4.7e-70 268.1 169 73.4
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 4.7e-70 268.1 169 71.6
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 6.1e-70 267.7 166 71.1
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 6.1e-70 267.7 169 71.6
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 6.1e-70 267.7 169 71.0
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 7.9e-70 267.3 168 70.8
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 7.9e-70 267.3 166 71.1
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 1.0e-69 266.9 166 71.1
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 1.0e-69 266.9 166 73.5
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.0e-69 266.9 166 73.5
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.0e-69 266.9 166 73.5
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 1.0e-69 266.9 169 73.4
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 1.4e-69 266.5 168 71.4
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 2.3e-69 265.8 160 74.4
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.3e-69 265.8 166 72.3
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 3.0e-69 265.4 162 73.5
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.0e-69 265.4 169 71.6
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.0e-69 265.4 169 71.6
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 3.0e-69 265.4 170 72.9
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 3.9e-69 265.0 169 71.0
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 3.9e-69 265.0 169 70.4
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 5.1e-69 264.6 169 70.4
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 5.1e-69 264.6 163 72.4
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 6.7e-69 264.2 169 70.4
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 8.8e-69 263.8 169 70.4
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 8.8e-69 263.8 162 73.5
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.1e-68 263.5 169 72.2
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 3.3e-68 261.9 170 70.0
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 9.7e-68 260.4 160 74.4
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 1.7e-67 259.6 169 70.4
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.7e-67 259.6 165 69.7
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 2.2e-67 259.2 169 68.0
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 2.8e-67 258.8 166 69.9
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 3.7e-67 258.5 169 71.6
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 4.8e-67 258.1 169 69.8
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.4e-66 256.5 160 71.2
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.4e-66 255.8 169 66.3
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.1e-66 255.4 169 69.2
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 5.3e-66 254.6 169 65.7
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 9.1e-66 253.8 168 70.8
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.2e-65 253.4 163 69.9
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 2.0e-65 252.7 170 67.6
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 2.6e-65 252.3 166 68.1
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 5.0e-64 248.1 163 68.1
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 4.2e-63 245.0 169 69.8
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 4.2e-63 245.0 222 53.2
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 5.5e-63 244.6 170 65.3
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 1.6e-62 243.0 156 73.1
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 2.1e-62 242.7 169 67.5
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 1.0e-61 240.4 164 67.1
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 3.9e-61 238.4 157 67.5
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 4.4e-60 235.0 143 74.1
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 2.2e-59 232.6 146 71.9
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 8.2e-59 230.7 163 64.4
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 7.0e-58 227.6 143 70.6
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 7.0e-58 227.6 143 70.6
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 2.6e-57 225.7 146 69.2
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 2.2e-56 222.6 146 70.5
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 3.6e-54 215.3 159 66.0
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 5.2e-53 211.5 125 76.8
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 6.3e-51 204.5 129 69.8
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 1.6e-49 199.9 165 66.7
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.6e-49 199.9 149 59.7
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.6e-49 199.9 191 55.0
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 2.2e-48 196.1 148 61.5
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.9e-48 195.7 124 71.8
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 2.9e-48 195.7 122 72.1
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 2.9e-48 195.7 161 55.3
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 3.8e-48 195.3 123 71.5
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.1e-47 193.7 149 58.4
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.0e-45 187.2 168 57.1
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 5.2e-45 184.9 102 77.5
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 6.8e-45 184.5 140 58.6
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 3.4e-44 182.2 122 68.0
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 1.8e-42 176.4 104 75.0
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 7.0e-42 174.5 103 75.7
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 1.6e-38 163.3 108 68.5
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 1.8e-34 149.8 140 55.0
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.1e-34 149.1 93 77.4
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 8.6e-32 141.0 143 51.7
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 7.3e-31 137.9 94 70.2
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.6e-25 120.2 81 70.4
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.1e-23 114.0 60 90.0
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.4e-18 97.1 52 75.0
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 1.5e-15 87.0 71 63.4


User provided reference genes

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