Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 1.0e-125 453.4 227 100.0
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 1.0e-104 383.6 226 87.6
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 1.5e-103 379.8 218 89.0
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-85 320.1 213 78.9
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 3.7e-78 295.4 205 74.1
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-75 286.2 221 72.4
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 1.8e-72 276.6 210 70.0
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 1.2e-65 253.8 229 63.3
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 2.2e-62 243.0 157 74.5
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-61 240.7 185 72.4
BcaB08g36045 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-58 230.3 157 74.5
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 5.3e-53 211.8 208 56.7
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 2.6e-52 209.5 224 53.6
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 3.4e-52 209.1 215 54.0
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 4.5e-52 208.8 208 55.3
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 6.5e-51 204.9 207 55.1
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 6.5e-51 204.9 207 55.1
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 1.1e-50 204.1 139 72.7
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 5.1e-48 195.3 194 57.2
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 5.1e-48 195.3 194 57.2
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-47 193.4 207 53.1
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 4.4e-47 192.2 194 56.2
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 9.7e-47 191.0 208 52.9
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 1.3e-46 190.7 208 54.3
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 4.1e-45 185.7 185 56.8
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 7.0e-45 184.9 198 51.5
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 8.5e-43 177.9 166 57.8
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 9.4e-42 174.5 207 49.3
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.8e-40 170.2 173 53.2
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 1.2e-36 157.5 151 56.3
C09p48560 Brassica napus HOM05D007210 ORTHO05D006152 1.6e-33 147.1 106 70.8
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.5e-31 140.6 198 44.9
BcaC01g06451 Brassica carinata HOM05D007210 ORTHO05D006152 3.0e-24 116.3 179 40.8
BolC9t57698H Brassica oleracea HOM05D007210 ORTHO05D006152 4.9e-22 109.0 71 76.1
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 1.4e-21 107.5 193 35.8
AL52U10010 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.4e-21 106.7 116 49.1
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 5.4e-21 105.5 188 36.2
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 7.7e-20 101.7 162 41.4
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.8e-19 99.4 147 37.4
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 8.6e-19 98.2 160 33.8
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-18 97.8 177 33.9
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 9.5e-18 94.7 166 33.7
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.6e-17 92.8 136 38.2
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.0e-16 89.4 136 37.5
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 4.0e-16 89.4 133 36.8
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 1.2e-15 87.8 177 35.0
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-15 87.0 161 33.5
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 2.0e-15 87.0 161 33.5
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 2.0e-15 87.0 147 34.7
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 2.6e-15 86.7 152 34.2
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.4e-15 86.3 156 35.9
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 3.4e-15 86.3 149 36.9
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 9.8e-15 84.7 136 35.3
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 9.8e-15 84.7 136 36.8
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 2.2e-14 83.6 136 35.3
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 2.2e-14 83.6 118 37.3
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.7e-14 82.8 141 35.5
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 3.7e-14 82.8 144 36.1
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.9e-14 82.4 131 35.1
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.3e-14 81.6 147 35.4
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-13 81.3 163 33.1
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-13 81.3 163 33.1
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.8e-13 80.5 156 34.0
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 3.2e-13 79.7 140 35.0
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 5.4e-13 79.0 115 38.3
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 5.4e-13 79.0 173 31.8
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 7.0e-13 78.6 171 30.4
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 7.0e-13 78.6 131 35.1
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 9.2e-13 78.2 139 36.0
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 9.2e-13 78.2 144 37.5
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 9.2e-13 78.2 136 33.8
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.2e-12 77.8 94 39.4
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-12 77.8 142 31.7
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.2e-12 77.8 135 34.8
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 1.6e-12 77.4 128 36.7
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.0e-12 77.0 165 32.7
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.5e-12 76.3 178 28.7
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 3.5e-12 76.3 129 32.6
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 4.6e-12 75.9 132 35.6
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 4.6e-12 75.9 132 35.6
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 5.9e-12 75.5 134 34.3
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 5.9e-12 75.5 157 33.1
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 7.8e-12 75.1 130 31.5
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 7.8e-12 75.1 128 35.2
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.0e-11 74.7 123 35.8
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 1.7e-11 73.9 153 32.7
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 1.7e-11 73.9 153 32.7
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.3e-11 73.6 139 33.1
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 2.3e-11 73.6 117 37.6
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 3.9e-11 72.8 132 34.8
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 5.0e-11 72.4 107 38.3
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 5.0e-11 72.4 132 36.4
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.1e-10 71.2 133 36.1
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.5e-10 70.9 80 41.2
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.9e-10 70.5 112 36.6
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 2.5e-10 70.1 105 38.1
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 4.3e-10 69.3 128 32.0
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.6e-09 67.4 95 35.8
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 1.6e-09 67.4 120 35.0
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 2.8e-09 66.6 96 38.5
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 1.0e-08 64.7 128 32.8
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 1.8e-08 63.9 103 36.9
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.1e-08 63.2 151 30.5
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 4.0e-08 62.8 103 31.1
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 4.0e-08 62.8 110 36.4
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 5.2e-08 62.4 111 32.4
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 5.2e-08 62.4 152 30.3
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 6.8e-08 62.0 104 33.7
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 6.8e-08 62.0 104 33.7
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 6.8e-08 62.0 104 33.7
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 6.8e-08 62.0 95 33.7
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 8.9e-08 61.6 137 31.4
THA.LOC104809406 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 8.9e-08 61.6 118 39.0
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 3.4e-07 59.7 89 36.0
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 4.4e-07 59.3 118 32.2
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 7.5e-07 58.5 89 32.6
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 1.3e-06 57.8 89 32.6
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 1.3e-06 57.8 89 32.6
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 1.3e-06 57.8 104 31.7
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.3e-06 57.8 97 34.0
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 2.9e-06 56.6 104 30.8
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 2.9e-06 56.6 104 30.8
Carub.0006s0396 Capsella rubella HOM05D008885 ORTHO05D006152 2.9e-06 56.6 132 31.8
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 3.7e-06 56.2 120 35.8
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 4.9e-06 55.8 152 30.9
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 4.9e-06 55.8 112 34.8
THA.LOC104809407 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 4.9e-06 55.8 119 36.1
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 6.4e-06 55.5 133 26.3


User provided reference genes

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