Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p48550 Brassica napus HOM05D009579 ORTHO05D019922 0.0e+00 1130.5 565 100.0
C02p11010 Brassica napus HOM05D009579 ORTHO05D019922 4.9e-156 555.4 321 87.9
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 6.4e-156 555.1 341 84.5
C08p22310 Brassica napus HOM05D009579 ORTHO05D019922 1.8e-126 457.2 253 90.5
BolC2t07171H Brassica oleracea HOM05D063622 ORTHO05D019922 2.0e-64 251.1 135 90.4
BolC9t57697H Brassica oleracea HOM05D009579 ORTHO05D019922 7.5e-64 249.2 134 97.8
BcaC05g29762 Brassica carinata HOM05D009579 ORTHO05D092626 1.7e-44 184.9 352 38.6
A04p33340 Brassica napus HOM05D000073 ORTHO05D000033 3.0e-44 184.1 178 55.6
BcaC07g40975 Brassica carinata HOM05D009579 ORTHO05D014125 3.6e-42 177.2 258 44.2
BcaC02g09063 Brassica carinata HOM05D009579 ORTHO05D014125 4.4e-32 143.7 222 44.6
BolC4t25373H Brassica oleracea HOM05D009579 ORTHO05D014125 4.4e-32 143.7 222 44.6
BcaC02g07321 Brassica carinata HOM05D008872 ORTHO05D011322 1.7e-31 141.7 510 30.4
BolC3t12905H Brassica oleracea HOM05D009579 ORTHO05D014125 2.4e-30 137.9 222 43.7
BcaB03g16517 Brassica carinata HOM05D009579 ORTHO05D014125 3.5e-29 134.0 216 44.0
A08p01540 Brassica napus HOM05D009579 ORTHO05D014125 7.3e-27 126.3 208 41.8
C02p46890 Brassica napus HOM05D008872 ORTHO05D032322 4.7e-26 123.6 515 30.7
BolC3t19826H Brassica oleracea HOM05D008872 ORTHO05D032322 1.4e-25 122.1 508 29.1
C04p37990 Brassica napus HOM05D009579 ORTHO05D014125 1.2e-24 119.0 166 46.4
C07p53080 Brassica napus HOM05D013189 ORTHO05D032411 1.2e-24 119.0 358 33.2
C09p62140 Brassica napus HOM05D009579 ORTHO05D021934 4.4e-24 117.1 277 33.6
C09p62210 Brassica napus HOM05D009579 ORTHO05D021934 5.8e-24 116.7 240 33.8
BraA05t20031Z Brassica rapa HOM05D021045 ORTHO05D027803 7.6e-24 116.3 216 39.8
A05p10860 Brassica napus HOM05D021045 ORTHO05D027803 2.9e-23 114.4 234 37.6
BcaNung03192 Brassica carinata HOM05D013189 ORTHO05D032411 8.4e-23 112.8 382 30.9
C01p19990 Brassica napus HOM05D009579 ORTHO05D014125 1.6e-21 108.6 180 40.6
BcaC08g45935 Brassica carinata HOM05D008872 ORTHO05D039599 1.3e-20 105.5 239 34.3
C06p37330 Brassica napus HOM05D008872 ORTHO05D039599 1.3e-20 105.5 239 34.3
BcaB01g03787 Brassica carinata HOM05D009579 ORTHO05D014125 1.2e-16 92.4 215 36.7
BcaC07g37406 Brassica carinata HOM05D006751 ORTHO05D008710 1.2e-16 92.4 189 36.5
C09p00850 Brassica napus HOM05D009579 ORTHO05D014125 1.2e-16 92.4 139 41.7
BolC9t53019H Brassica oleracea HOM05D009579 ORTHO05D014125 5.8e-16 90.1 139 41.0
BcaC02g09916 Brassica carinata HOM05D009579 ORTHO05D092397 2.9e-15 87.8 232 31.0
BcaC04g22210 Brassica carinata HOM05D008872 ORTHO05D011322 1.9e-14 85.1 527 26.9
C03p03660 Brassica napus HOM05D009579 ORTHO05D014125 1.9e-14 85.1 101 48.5
BcaC01g00092 Brassica carinata HOM05D008872 ORTHO05D032322 3.2e-14 84.3 332 29.2
C05p17110 Brassica napus HOM05D008872 ORTHO05D011322 1.6e-13 82.0 406 27.3
BolC3t14798H Brassica oleracea HOM05D009579 ORTHO05D014125 2.1e-13 81.6 139 39.6
BNapus_Darmor_BZH_scaffold_229p00090 Brassica napus HOM05D008872 ORTHO05D011322 3.5e-13 80.9 130 38.5
BcaC03g16816 Brassica carinata HOM05D008872 ORTHO05D011322 6.0e-13 80.1 196 36.7
A07p34770 Brassica napus HOM05D008872 ORTHO05D011322 1.0e-12 79.3 130 37.7
C07p08830 Brassica napus HOM05D009579 ORTHO05D021934 3.0e-12 77.8 111 43.2
BolC7t41296H Brassica oleracea HOM05D009579 ORTHO05D021934 5.1e-12 77.0 111 43.2
BolC3t19888H Brassica oleracea HOM05D021045 ORTHO05D011322 1.1e-11 75.9 132 36.4
BcaC07g41036 Brassica carinata HOM05D013189 ORTHO05D023891 9.6e-11 72.8 188 33.0
C08p40390 Brassica napus HOM05D013189 ORTHO05D023891 9.6e-11 72.8 188 33.0
C07p42690 Brassica napus HOM05D008872 ORTHO05D011322 2.8e-10 71.2 181 35.4
BcaB02g07818 Brassica carinata HOM05D009579 ORTHO05D091475 1.4e-09 68.9 123 39.0
BcaB04g20432 Brassica carinata HOM05D008872 ORTHO05D011322 2.0e-08 65.1 123 37.4
BraA01t00019Z Brassica rapa HOM05D013189 ORTHO05D023891 2.0e-08 65.1 150 33.3
C08p08820 Brassica napus HOM05D013189 ORTHO05D023891 1.3e-07 62.4 150 32.0
BolC8t47728H Brassica oleracea HOM05D013189 ORTHO05D023891 1.3e-07 62.4 150 32.0
BolC7t44799H Brassica oleracea HOM05D008872 ORTHO05D011322 4.9e-07 60.5 122 41.0
C03p17890 Brassica napus HOM05D008872 ORTHO05D011322 6.4e-07 60.1 201 31.8
BcaB03g16768 Brassica carinata HOM05D009579 ORTHO05D014125 8.4e-07 59.7 96 45.8
BcaC04g21648 Brassica carinata HOM05D009579 ORTHO05D092920 1.4e-06 58.9 114 36.0
BolC5t28809H Brassica oleracea HOM05D015039 ORTHO05D011322 1.4e-06 58.9 108 39.8
C03p83110 Brassica napus HOM05D015039 ORTHO05D011322 2.4e-06 58.2 108 38.9
A04p33690 Brassica napus HOM05D015039 ORTHO05D011322 5.4e-06 57.0 118 38.1
CARHR217540 Cardamine hirsuta HOM05D015039 ORTHO05D011322 7.1e-06 56.6 90 41.1
BolC3t20471H Brassica oleracea HOM05D008872 ORTHO05D011322 9.3e-06 56.2 128 40.6


User provided reference genes

Program Settings