Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 5.6e-37 157.1 82 100.0
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 5.6e-37 157.1 82 100.0
C09p46990 Brassica napus HOM05D002824 ORTHO05D007162 5.6e-37 157.1 82 100.0
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 7.3e-37 156.8 82 98.8
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 1.6e-36 155.6 82 98.8
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 1.6e-36 155.6 82 98.8
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 1.6e-36 155.6 82 98.8
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 1.6e-36 155.6 82 98.8
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 1.6e-36 155.6 82 98.8
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 1.6e-36 155.6 82 98.8
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 1.6e-36 155.6 82 98.8
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 2.1e-36 155.2 82 98.8
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 2.1e-36 155.2 82 98.8
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 2.1e-36 155.2 82 98.8
Thhalv10027382m.g Eutrema salsugineum HOM05D002824 ORTHO05D007162 2.8e-36 154.8 82 98.8
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 3.6e-36 154.5 82 98.8
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 8.1e-36 153.3 82 96.3
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 5.3e-35 150.6 82 96.3
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 9.9e-34 146.4 82 90.2
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.1e-31 138.7 82 84.1
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 3.0e-30 134.8 82 85.4
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.9e-30 134.4 82 81.7
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 6.6e-30 133.7 82 82.9
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.1e-29 132.9 80 82.5
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 1.5e-29 132.5 82 81.7
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 1.5e-29 132.5 82 82.9
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.5e-29 132.5 82 81.7
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.5e-29 132.5 82 81.7
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.3e-29 131.3 82 80.5
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 4.3e-29 131.0 82 80.5
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 5.6e-29 130.6 82 81.7
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 8.1e-28 126.7 82 81.7
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 8.1e-28 126.7 82 81.7
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 1.4e-27 125.9 82 81.7
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 1.8e-27 125.6 82 78.0
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.8e-27 125.6 80 78.8
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 1.8e-27 125.6 82 78.0
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 1.8e-27 125.6 82 78.0
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 1.8e-27 125.6 82 78.0
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 1.8e-27 125.6 82 78.0
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 1.8e-27 125.6 82 78.0
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 1.8e-27 125.6 82 78.0
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 1.8e-27 125.6 82 78.0
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 1.8e-27 125.6 82 78.0
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 3.1e-27 124.8 82 79.3
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 3.1e-27 124.8 82 78.0
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 5.3e-27 124.0 82 78.0
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 5.3e-27 124.0 80 77.5
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 9.0e-27 123.2 82 76.8
Gorai.013G136400 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.5e-26 122.5 70 85.7
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 2.6e-26 121.7 82 78.0
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 2.6e-26 121.7 82 78.0
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 3.4e-26 121.3 78 82.1
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.8e-26 120.6 84 77.4
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 7.6e-26 120.2 82 74.4
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 9.9e-26 119.8 79 81.0
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 9.9e-26 119.8 79 81.0
MBI05_g05353_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D007162 3.8e-25 117.9 77 76.6
Phvul.001G158000 Phaseolus vulgaris HOM05D002824 ORTHO05D007162 8.4e-25 116.7 82 70.7
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 2.4e-24 115.2 82 76.8
Gohir.D13G121750 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.2e-24 114.4 70 82.9
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 5.4e-24 114.0 74 78.4
BolSC56t61248H Brassica oleracea HOM05D002824 ORTHO05D007162 9.3e-24 113.2 58 98.3
BraSC59t46570Z Brassica rapa HOM05D002824 ORTHO05D007162 9.3e-24 113.2 58 98.3
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 9.3e-24 113.2 72 79.2
Lalb_Chr20g0114531 Lupinus albus HOM05D002824 ORTHO05D007162 3.9e-22 107.8 70 78.6
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 6.7e-22 107.1 82 67.1
Gohir.A08G063166 Gossypium hirsutum HOM05D002824 ORTHO05D007162 7.4e-21 103.6 58 87.9
BolSC35t60670H Brassica oleracea HOM05D002824 ORTHO05D007162 2.1e-20 102.1 58 89.7
BolSC49t61163H Brassica oleracea HOM05D002824 ORTHO05D007162 2.1e-20 102.1 53 98.1
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.8e-20 101.7 65 75.4
Nitab4.5_0020737g0030 Nicotiana tabacum HOM05D002824 ORTHO05D007162 2.8e-20 101.7 65 78.5
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.1e-20 100.1 61 83.6
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 8.1e-20 100.1 63 79.4
MELO3C027652.2 Cucumis melo HOM05D002824 ORTHO05D007162 1.4e-19 99.4 60 85.0
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.4e-19 99.4 62 77.4
BraSC103t45484Z Brassica rapa HOM05D002824 ORTHO05D007162 9.0e-19 96.7 59 86.4
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.5e-18 95.9 62 77.4
BraSC58t46502Z Brassica rapa HOM05D002824 ORTHO05D007162 4.5e-18 94.4 58 84.5
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 4.5e-18 94.4 56 82.1
HanXRQChr00c0593g0576371 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-17 92.4 58 81.0
HanXRQChr04g0127481 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-17 92.4 58 81.0
HanXRQChr11g0321101 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-17 92.4 58 81.0
Nitab4.5_0000173g0100 Nicotiana tabacum HOM05D000964 ORTHO05D001488 2.2e-17 92.0 55 83.6
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 2.9e-17 91.7 65 70.8
MELO3C026355.2 Cucumis melo HOM05D002824 ORTHO05D007162 4.9e-17 90.9 58 81.0
FAN18G2960 Fragaria x ananassa HOM05D015635 ORTHO05D007162 4.6e-15 84.3 56 76.8
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 1.3e-14 82.8 75 56.0
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.1e-13 79.7 43 90.7
MELO3C033570.2 Cucumis melo HOM05D002824 ORTHO05D007162 3.3e-13 78.2 60 73.3
BraSC143t45637Z Brassica rapa HOM05D002824 ORTHO05D007162 2.1e-12 75.5 39 97.4
SEGI_01834 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 3.7e-12 74.7 56 64.3
SEGI_02369 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 3.7e-12 74.7 56 64.3
SEGI_04931 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 3.7e-12 74.7 56 64.3
SEGI_09600 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 3.7e-12 74.7 56 64.3
SEGI_17120 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 3.7e-12 74.7 56 64.3
SEGI_22757 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 3.7e-12 74.7 56 64.3
SEGI_27642 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 3.7e-12 74.7 56 64.3
SEGI_30352 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 1.1e-11 73.2 56 62.5
SGA_v2.0_scaffold208G41997 Striga asiatica HOM05D002824 ORTHO05D007162 1.1e-11 73.2 50 76.0
Medtr3g035490 Medicago truncatula HOM05D001133 ORTHO05D000941 3.4e-10 68.2 40 80.0
arahy.Tifrunner.gnm1.ann1.CYZ3KW Arachis hypogaea HOM05D001828 ORTHO05D001745 1.0e-09 66.6 42 81.0
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 2.2e-09 65.5 48 72.9
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.8e-09 64.7 40 75.0
ClCG10G008280 Citrullus lanatus HOM05D002824 ORTHO05D007162 5.5e-08 60.8 36 86.1
Hund15214 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.8e-06 55.8 60 53.3


User provided reference genes

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