Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p46050 Brassica napus HOM05D004128 ORTHO05D013807 7.6e-32 139.8 67 100.0
BolC9t57475H Brassica oleracea HOM05D004128 ORTHO05D013807 1.7e-31 138.7 67 98.5
BcaC04g20236 Brassica carinata HOM05D008735 ORTHO05D013807 3.5e-29 131.0 67 94.0
BcaC06g35460 Brassica carinata HOM05D000054 ORTHO05D000171 5.3e-25 117.1 60 91.7
C03p70560 Brassica napus HOM05D008735 ORTHO05D013807 1.4e-22 109.0 67 82.1
BolC3t19332H Brassica oleracea HOM05D008735 ORTHO05D013807 1.4e-22 109.0 67 82.1
A09p29460 Brassica napus HOM05D008735 ORTHO05D013807 6.0e-21 103.6 70 78.6
A05p08790 Brassica napus HOM05D004128 ORTHO05D103552 4.5e-16 87.4 67 70.1
A09p48610 Brassica napus HOM05D004128 ORTHO05D013807 4.5e-16 87.4 67 70.1
BraA09t40313Z Brassica rapa HOM05D004128 ORTHO05D013807 4.5e-16 87.4 67 70.1
BraA09t36411Z Brassica rapa HOM05D004128 ORTHO05D013807 5.8e-16 87.0 67 68.7
BolC2t10454H Brassica oleracea HOM05D004128 ORTHO05D013807 1.7e-15 85.5 67 67.2
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 2.9e-15 84.7 67 67.2
C01p37540 Brassica napus HOM05D004128 ORTHO05D013239 2.9e-15 84.7 67 67.2
C03p49790 Brassica napus HOM05D004128 ORTHO05D013239 2.9e-15 84.7 67 67.2
BolC2t10106H Brassica oleracea HOM05D004128 ORTHO05D013807 2.9e-15 84.7 67 67.2
BolC4t25487H Brassica oleracea HOM05D004128 ORTHO05D013807 2.9e-15 84.7 67 67.2
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 2.9e-15 84.7 67 67.2
C08p27820 Brassica napus HOM05D004128 ORTHO05D013239 3.8e-15 84.3 67 67.2
C09p52710 Brassica napus HOM05D004128 ORTHO05D013239 3.8e-15 84.3 66 66.7
BolC5t30881H Brassica oleracea HOM05D004128 ORTHO05D041928 8.4e-15 83.2 66 65.2
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 8.4e-15 83.2 67 65.7
C04p23900 Brassica napus HOM05D004128 ORTHO05D101996 1.1e-14 82.8 67 65.7
BolC3t17275H Brassica oleracea HOM05D004128 ORTHO05D013807 2.4e-14 81.6 67 65.7
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 2.4e-14 81.6 66 63.6
C03p82160 Brassica napus HOM05D004128 ORTHO05D013807 3.2e-14 81.3 67 65.7
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 3.2e-14 81.3 67 68.7
BraA09t37800Z Brassica rapa HOM05D004128 ORTHO05D108612 2.1e-13 78.6 67 62.7
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 3.5e-13 77.8 65 61.5
C08p39070 Brassica napus HOM05D004128 ORTHO05D013239 3.5e-13 77.8 63 63.5
C01p25850 Brassica napus HOM05D004128 ORTHO05D041928 7.9e-13 76.6 67 62.7
BcaB07g32266 Brassica carinata HOM05D008735 ORTHO05D016012 3.3e-11 71.2 86 55.8
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 5.6e-11 70.5 62 64.5
BcaNung01893 Brassica carinata HOM05D008735 ORTHO05D008395 2.1e-10 68.6 86 54.7
BcaC05g28239 Brassica carinata HOM05D008735 ORTHO05D016012 6.2e-10 67.0 76 56.6
BcaC07g38508 Brassica carinata HOM05D008735 ORTHO05D090800 6.2e-10 67.0 76 56.6
C03p46960 Brassica napus HOM05D008735 ORTHO05D099308 6.2e-10 67.0 76 56.6
C03p80320 Brassica napus HOM05D008735 ORTHO05D097331 6.2e-10 67.0 76 56.6
C04p37860 Brassica napus HOM05D008735 ORTHO05D099266 6.2e-10 67.0 76 56.6
C05p39020 Brassica napus HOM05D008735 ORTHO05D103688 6.2e-10 67.0 76 56.6
BolC1t03988H Brassica oleracea HOM05D008735 ORTHO05D105559 6.2e-10 67.0 76 56.6
BolC4t25360H Brassica oleracea HOM05D008735 ORTHO05D016012 6.2e-10 67.0 76 56.6
BolC5t32640H Brassica oleracea HOM05D008735 ORTHO05D016012 6.2e-10 67.0 76 56.6
BolC5t33010H Brassica oleracea HOM05D008735 ORTHO05D016012 6.2e-10 67.0 76 56.6
C04p32450 Brassica napus HOM05D008735 ORTHO05D016012 1.8e-09 65.5 76 55.3
BolC2t10158H Brassica oleracea HOM05D008735 ORTHO05D016012 1.8e-09 65.5 76 55.3
BcaB03g15896 Brassica carinata HOM05D008735 ORTHO05D092493 4.0e-09 64.3 75 54.7
BcaC08g47485 Brassica carinata HOM05D008735 ORTHO05D016012 5.3e-09 63.9 76 55.3
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 5.3e-09 63.9 76 55.3
BolC6t40326H Brassica oleracea HOM05D008735 ORTHO05D016012 5.3e-09 63.9 76 55.3
C02p46650 Brassica napus HOM05D008735 ORTHO05D098808 6.9e-09 63.5 76 53.9
BolC4t26338H Brassica oleracea HOM05D008735 ORTHO05D106317 6.9e-09 63.5 76 53.9
C05p42820 Brassica napus HOM05D008735 ORTHO05D100509 1.5e-08 62.4 76 55.3
C09p44260 Brassica napus HOM05D008735 ORTHO05D016012 2.6e-08 61.6 76 52.6
BolC2t12040H Brassica oleracea HOM05D008735 ORTHO05D016012 2.6e-08 61.6 76 55.3
C03p79100 Brassica napus HOM05D008735 ORTHO05D101655 7.6e-08 60.1 74 54.1
BolC5t31084H Brassica oleracea HOM05D004128 ORTHO05D013807 1.7e-07 58.9 50 62.0
BcaB01g01860 Brassica carinata HOM05D008735 ORTHO05D095819 4.9e-07 57.4 73 52.1
BcaC04g21799 Brassica carinata HOM05D004128 ORTHO05D018561 6.5e-07 57.0 67 53.7
C09p19220 Brassica napus HOM05D004128 ORTHO05D102580 1.1e-06 56.2 39 74.4
C06p17690 Brassica napus HOM05D004128 ORTHO05D013807 4.2e-06 54.3 48 60.4
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 5.5e-06 53.9 50 56.0


User provided reference genes

Program Settings