Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 3.8e-75 285.0 176 100.0
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 1.1e-74 283.5 176 98.9
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 1.9e-74 282.7 176 99.4
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 1.9e-74 282.7 176 99.4
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 7.7e-68 260.8 204 82.8
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 5.0e-67 258.1 177 91.0
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 3.7e-62 241.9 203 78.8
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 5.4e-61 238.0 179 87.2
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 1.6e-60 236.5 203 77.3
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 2.3e-59 232.6 183 80.9
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 1.1e-58 230.3 180 83.9
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 4.3e-58 228.4 178 83.1
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 1.2e-47 193.7 175 62.9
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 7.8e-36 154.5 181 54.7
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 3.1e-32 142.5 191 47.1
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 8.9e-32 141.0 190 47.4
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 8.4e-30 134.4 192 46.9
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 1.9e-29 133.3 189 46.0
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 2.4e-29 132.9 186 47.3
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.4e-29 132.9 192 46.4
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 3.2e-29 132.5 186 47.3
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 5.4e-29 131.7 192 45.8
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 1.2e-28 130.6 190 44.7
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 2.7e-28 129.4 189 46.0
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 2.7e-28 129.4 185 45.4
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 7.8e-28 127.9 190 45.3
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.0e-27 127.5 190 45.8
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 1.0e-27 127.5 189 44.4
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.3e-27 127.1 185 46.5
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 2.3e-27 126.3 189 45.0
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.9e-27 125.6 188 44.1
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.9e-27 125.6 188 44.1
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 3.9e-27 125.6 191 44.0
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 6.6e-27 124.8 192 44.8
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 6.6e-27 124.8 189 43.4
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 8.7e-27 124.4 191 42.4
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 1.1e-26 124.0 185 44.3
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.1e-26 124.0 191 44.5
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.1e-26 124.0 191 44.5
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 1.1e-26 124.0 189 43.4
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 1.5e-26 123.6 185 46.5
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.3e-26 122.5 183 45.4
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 5.6e-26 121.7 191 44.5
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 7.3e-26 121.3 187 42.8
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 9.6e-26 120.9 191 42.4
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 1.2e-25 120.6 175 43.4
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.2e-25 120.6 191 43.5
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.2e-25 120.6 185 43.2
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.6e-25 120.2 183 44.3
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 1.6e-25 120.2 179 43.6
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 2.8e-25 119.4 191 45.0
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 4.7e-25 118.6 175 42.9
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 6.2e-25 118.2 182 44.0
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 6.2e-25 118.2 192 43.8
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 1.1e-24 117.5 192 41.7
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.1e-24 117.5 190 42.6
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 1.4e-24 117.1 186 41.9
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.4e-24 117.1 191 42.9
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 1.4e-24 117.1 178 43.3
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.4e-24 117.1 190 43.2
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 1.4e-24 117.1 197 39.1
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 2.4e-24 116.3 197 38.1
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 3.1e-24 115.9 200 41.0
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 4.0e-24 115.5 191 40.8
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 4.0e-24 115.5 190 40.0
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 5.2e-24 115.2 190 40.5
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 3.4e-23 112.5 192 39.6
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 4.4e-23 112.1 191 41.4
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 7.6e-23 111.3 174 40.8
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 7.6e-23 111.3 187 40.6
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 2.9e-22 109.4 186 39.2
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 3.8e-22 109.0 181 39.8
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.8e-22 109.0 188 42.0
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 4.2e-21 105.5 190 38.4
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 5.4e-21 105.1 177 49.7
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 7.1e-21 104.8 188 41.0
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 9.3e-21 104.4 188 41.0
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 2.7e-20 102.8 188 40.4
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 4.6e-20 102.1 176 39.2
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 1.0e-19 100.9 188 39.4
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 2.3e-19 99.8 188 38.8
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 2.3e-19 99.8 179 39.7
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.3e-19 99.8 188 39.4
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 6.6e-19 98.2 177 37.3
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 8.7e-19 97.8 175 41.1
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 8.7e-19 97.8 188 38.8
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 1.5e-18 97.1 185 40.5
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 1.5e-18 97.1 184 34.2
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.9e-18 96.7 180 40.6
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 5.6e-18 95.1 188 37.2
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 5.6e-18 95.1 189 37.0
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 5.6e-18 95.1 185 41.1
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 9.6e-18 94.4 181 38.1
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 1.3e-17 94.0 188 34.6
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 1.3e-17 94.0 177 37.3
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 2.8e-17 92.8 189 38.1
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 4.8e-17 92.0 187 35.3
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 3.1e-16 89.4 190 35.8
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 4.0e-16 89.0 188 38.3
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 4.0e-16 89.0 180 35.6
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 4.0e-16 89.0 188 37.8
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 1.2e-15 87.4 196 36.2
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 1.5e-15 87.0 199 32.2
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 1.5e-15 87.0 188 37.2
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.5e-15 87.0 188 37.8
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 7.6e-15 84.7 194 30.9
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 1.3e-14 84.0 186 32.8
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 2.2e-14 83.2 183 35.5
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 2.9e-14 82.8 207 34.3
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 6.4e-14 81.6 183 37.2
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 6.4e-14 81.6 179 33.5
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 9.3e-13 77.8 166 31.9
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 1.2e-12 77.4 194 32.5
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 1.2e-12 77.4 191 34.6
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 2.1e-12 76.6 179 36.3
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 2.1e-12 76.6 185 33.5
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.0e-11 74.3 183 35.0
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.0e-11 74.3 168 36.9
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 1.8e-11 73.6 177 35.6
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 2.3e-11 73.2 184 34.2
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 5.1e-11 72.0 188 32.4
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 1.5e-10 70.5 176 33.5
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 2.5e-10 69.7 105 43.8
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 5.6e-10 68.6 170 33.5
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 5.6e-10 68.6 182 31.3
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 6.9e-08 61.6 160 29.4
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 3.4e-07 59.3 34 70.6
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 5.8e-07 58.5 165 32.7
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 7.6e-07 58.2 165 30.3
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 1.3e-06 57.4 106 39.6


User provided reference genes

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