Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p45060 Brassica napus HOM05D001867 ORTHO05D001708 3.9e-57 224.6 113 100.0
C03p29860 Brassica napus HOM05D001867 ORTHO05D001708 1.6e-37 159.5 105 81.0
Carub.0004s2771 Capsella rubella HOM05D001867 ORTHO05D001708 1.5e-32 142.9 110 70.0
Sp4g27180 Schrenkiella parvula HOM05D001867 ORTHO05D001708 3.5e-29 131.7 110 63.6
Thhalv10001538m.g Eutrema salsugineum HOM05D001867 ORTHO05D001708 1.0e-28 130.2 111 64.0
AT2G45120 Arabidopsis thaliana HOM05D001867 ORTHO05D001708 6.6e-28 127.5 105 64.8
BolC3t15333H Brassica oleracea HOM05D001867 ORTHO05D001708 8.6e-28 127.1 105 67.6
BcaC01g05158 Brassica carinata HOM05D001867 ORTHO05D001708 3.6e-26 121.7 105 65.7
AL4G44210 Arabidopsis lyrata HOM05D001867 ORTHO05D001708 1.4e-25 119.8 106 63.2
A03p25020 Brassica napus HOM05D001867 ORTHO05D001708 6.8e-25 117.5 109 61.5
BraA03t11705Z Brassica rapa HOM05D001867 ORTHO05D001708 6.8e-25 117.5 109 61.5
AT3G60580 Arabidopsis thaliana HOM05D001867 ORTHO05D001708 1.2e-18 96.7 106 53.8
AL5G42890 Arabidopsis lyrata HOM05D001867 ORTHO05D001708 2.8e-18 95.5 106 53.8
A04p33630 Brassica napus HOM05D001867 ORTHO05D001708 4.7e-18 94.7 108 51.9
BraA04t18827Z Brassica rapa HOM05D001867 ORTHO05D001708 4.7e-18 94.7 108 51.9
CARHR170970 Cardamine hirsuta HOM05D001867 ORTHO05D001708 8.0e-18 94.0 111 50.5
Thhalv10006508m.g Eutrema salsugineum HOM05D001867 ORTHO05D001708 8.9e-17 90.5 111 56.8
BcaB01g03294 Brassica carinata HOM05D001867 ORTHO05D001708 2.6e-16 89.0 100 54.0
CARHR140350 Cardamine hirsuta HOM05D001867 ORTHO05D001708 2.6e-16 89.0 106 53.8
C04p32080 Brassica napus HOM05D001867 ORTHO05D001708 5.8e-16 87.8 110 50.0
BolC4t24761H Brassica oleracea HOM05D001867 ORTHO05D001708 5.8e-16 87.8 110 50.0
BcaC02g10160 Brassica carinata HOM05D001867 ORTHO05D001708 1.3e-15 86.7 110 49.1
BcaC08g45077 Brassica carinata HOM05D001867 ORTHO05D001708 2.2e-15 85.9 110 50.9
C06p26860 Brassica napus HOM05D001867 ORTHO05D001708 2.2e-15 85.9 110 50.9
BolC6t37860H Brassica oleracea HOM05D001867 ORTHO05D001708 2.2e-15 85.9 110 50.9
A09p52800 Brassica napus HOM05D001867 ORTHO05D001708 3.7e-15 85.1 111 53.2
BraA09t40712Z Brassica rapa HOM05D001867 ORTHO05D001708 4.9e-15 84.7 111 52.3
Sp5g02650 Schrenkiella parvula HOM05D001867 ORTHO05D001708 6.4e-15 84.3 97 52.6
BcaB02g07404 Brassica carinata HOM05D001867 ORTHO05D001708 8.3e-15 84.0 92 52.2
C08p35530 Brassica napus HOM05D001867 ORTHO05D001708 1.9e-14 82.8 109 49.5
BolC8t51145H Brassica oleracea HOM05D001867 ORTHO05D001708 1.9e-14 82.8 109 49.5
Carub.0005s2730 Capsella rubella HOM05D001867 ORTHO05D001708 1.6e-13 79.7 117 49.6
BcaC07g40579 Brassica carinata HOM05D001867 ORTHO05D001708 2.0e-13 79.3 108 51.9
Thhalv10015865m.g Eutrema salsugineum HOM05D001867 ORTHO05D001708 1.0e-12 77.0 72 61.1
C04p71390 Brassica napus HOM05D001867 ORTHO05D001708 1.3e-12 76.6 110 47.3
BcaB02g08164 Brassica carinata HOM05D001867 ORTHO05D001708 3.0e-12 75.5 111 43.2
Sabra02G0112100 Salix brachista HOM05D001867 ORTHO05D001708 3.9e-12 75.1 96 42.7
A07p25170 Brassica napus HOM05D001867 ORTHO05D001708 1.1e-11 73.6 112 48.2
BraA07t30159Z Brassica rapa HOM05D001867 ORTHO05D001708 1.1e-11 73.6 112 48.2
Manes.01G269300 Manihot esculenta HOM05D001867 ORTHO05D001708 1.5e-11 73.2 85 50.6
THA.LOC104817599 Tarenaya hassleriana HOM05D001867 ORTHO05D001708 1.9e-11 72.8 111 46.8
Thecc.01G384600 Theobroma cacao HOM05D001867 ORTHO05D001708 1.9e-11 72.8 90 46.7
COL.COLO4_12481 Corchorus olitorius HOM05D001867 ORTHO05D001708 2.5e-11 72.4 112 40.2
Potri.014G066100 Populus trichocarpa HOM05D001867 ORTHO05D001708 2.5e-11 72.4 102 42.2
BolC4t28646H Brassica oleracea HOM05D001867 ORTHO05D001708 4.3e-11 71.6 108 44.4
BcaC02g10161 Brassica carinata HOM05D001867 ORTHO05D001708 5.6e-11 71.2 107 47.7
Duzib138G0074 Durio zibethinus HOM05D001867 ORTHO05D001708 9.5e-11 70.5 88 46.6
Gohir.D07G153200 Gossypium hirsutum HOM05D001867 ORTHO05D001708 9.5e-11 70.5 89 46.1
BraA04t15878Z Brassica rapa HOM05D001867 ORTHO05D001708 1.6e-10 69.7 108 48.1
Gorai.001G175400 Gossypium raimondii HOM05D001867 ORTHO05D001708 1.6e-10 69.7 89 46.1
RcHm_v2.0_Chr1g0348921 Rosa chinensis HOM05D001867 ORTHO05D001708 1.6e-10 69.7 114 38.6
TWI14G1211 Tripterygium wilfordii HOM05D001867 ORTHO05D001708 1.6e-10 69.7 99 44.4
TWI59G0547 Tripterygium wilfordii HOM05D001867 ORTHO05D001708 1.6e-10 69.7 107 42.1
Gohir.D08G157900 Gossypium hirsutum HOM05D001867 ORTHO05D001708 2.1e-10 69.3 95 40.0
TWI23G0083 Tripterygium wilfordii HOM05D001867 ORTHO05D001708 2.1e-10 69.3 105 41.9
Aa31LG1G26680 Aethionema arabicum HOM05D001867 ORTHO05D001708 2.8e-10 68.9 106 45.3
CSS0033702 Camellia sinensis var. sinensis HOM05D001867 ORTHO05D001708 2.8e-10 68.9 92 40.2
Lj7P537T47 Lonicera japonica HOM05D001867 ORTHO05D001708 3.6e-10 68.6 81 44.4
Gohir.A07G147200 Gossypium hirsutum HOM05D001867 ORTHO05D001708 4.7e-10 68.2 89 44.9
FAN06G0704 Fragaria x ananassa HOM05D001867 ORTHO05D001708 1.1e-09 67.0 111 37.8
FAN06G3486 Fragaria x ananassa HOM05D001867 ORTHO05D001708 1.1e-09 67.0 111 37.8
CiPaw.14G025100 Carya illinoinensis HOM05D001867 ORTHO05D001708 1.4e-09 66.6 100 45.0
FAN03G2065 Fragaria x ananassa HOM05D001867 ORTHO05D001708 1.4e-09 66.6 111 37.8
FAN10G2581 Fragaria x ananassa HOM05D001867 ORTHO05D001708 1.4e-09 66.6 111 37.8
Duzib133G0217 Durio zibethinus HOM05D001867 ORTHO05D001708 1.8e-09 66.2 104 43.3
FAN10G0443 Fragaria x ananassa HOM05D001867 ORTHO05D001708 1.8e-09 66.2 111 36.0
Gorai.004G164000 Gossypium raimondii HOM05D001867 ORTHO05D001708 1.8e-09 66.2 95 38.9
Gorai.008G106500 Gossypium raimondii HOM05D001867 ORTHO05D001708 1.8e-09 66.2 77 49.4
A04p01570 Brassica napus HOM05D001867 ORTHO05D001708 2.3e-09 65.9 108 44.4
Sabra14G0046100 Salix brachista HOM05D001867 ORTHO05D001708 2.3e-09 65.9 102 40.2
FvH4_7g10990 Fragaria vesca HOM05D001867 ORTHO05D001708 4.0e-09 65.1 111 36.9
Actinidia33483 Actinidia chinensis HOM05D001867 ORTHO05D001708 6.8e-09 64.3 86 47.7
Cfa008149 Carpinus fangiana HOM05D001867 ORTHO05D001708 6.8e-09 64.3 75 48.0
Ciclev10020499m.g Citrus clementina HOM05D001867 ORTHO05D001708 6.8e-09 64.3 116 37.1
FAN01G2176 Fragaria x ananassa HOM05D001867 ORTHO05D001708 6.8e-09 64.3 110 37.3
Manes.05G049500 Manihot esculenta HOM05D001867 ORTHO05D001708 6.8e-09 64.3 90 43.3
Gohir.A08G137000 Gossypium hirsutum HOM05D001867 ORTHO05D001708 8.9e-09 63.9 95 38.9
Gohir.A12G095200 Gossypium hirsutum HOM05D001867 ORTHO05D001708 8.9e-09 63.9 83 47.0
Gohir.D12G097800 Gossypium hirsutum HOM05D001867 ORTHO05D001708 1.2e-08 63.5 77 48.1
Cpa.g.sc2070.1 Carica papaya HOM05D001867 ORTHO05D001708 1.5e-08 63.2 116 38.8
Atru.chr5.231 Acer truncatum HOM05D001867 ORTHO05D001708 2.0e-08 62.8 120 35.0
CANSAT21G0755 Cannabis sativa HOM05D001867 ORTHO05D001708 2.0e-08 62.8 118 35.6
Peaxi162Scf00350g00091 Petunia axillaris HOM05D001867 ORTHO05D001708 2.0e-08 62.8 81 42.0
Potri.002G143800 Populus trichocarpa HOM05D001867 ORTHO05D001708 2.0e-08 62.8 103 39.8
Prupe.2G136700 Prunus persica HOM05D001867 ORTHO05D001708 2.0e-08 62.8 96 39.6
CiPaw.13G031900 Carya illinoinensis HOM05D001867 ORTHO05D001708 2.6e-08 62.4 89 41.6
Dinv44115 Davidia involucrata HOM05D001867 ORTHO05D001708 2.6e-08 62.4 115 33.9
Actinidia12676 Actinidia chinensis HOM05D001867 ORTHO05D001708 3.4e-08 62.0 85 47.1
Lj1g0010457 Lotus japonicus HOM05D001867 ORTHO05D001708 4.4e-08 61.6 119 35.3
Medtr0160s0030 Medicago truncatula HOM05D001867 ORTHO05D001708 4.4e-08 61.6 131 33.6
MSTRG.28174 Avicennia marina HOM05D001867 ORTHO05D001708 5.8e-08 61.2 77 42.9
Lalb_Chr12g0207861 Lupinus albus HOM05D001867 ORTHO05D001708 5.8e-08 61.2 119 37.8
Glyma.01G134200 Glycine max HOM05D001867 ORTHO05D001708 7.5e-08 60.8 92 38.0
MD01G1182000 Malus domestica HOM05D001867 ORTHO05D001708 7.5e-08 60.8 84 41.7
vmacro21036 Vaccinium macrocarpon HOM05D001867 ORTHO05D001708 7.5e-08 60.8 84 38.1
Rhsim01G0135400 Rhododendron simsii HOM05D001867 ORTHO05D001708 9.9e-08 60.5 87 37.9
MELO3C005960.2 Cucumis melo HOM05D001867 ORTHO05D001708 1.3e-07 60.1 112 39.3
Thecc.03G250600 Theobroma cacao HOM05D001867 ORTHO05D001708 1.3e-07 60.1 85 41.2
CsaV3_3G007370 Cucumis sativus L. HOM05D001867 ORTHO05D001708 1.7e-07 59.7 101 40.6
Oeu064580.1 Olea europaea HOM05D001867 ORTHO05D001708 1.7e-07 59.7 111 35.1
MD02G1214100 Malus domestica HOM05D001867 ORTHO05D001708 3.7e-07 58.5 114 36.0
Phvul.008G143900 Phaseolus vulgaris HOM05D001867 ORTHO05D001708 4.9e-07 58.2 119 33.6
THA.LOC104817006 Tarenaya hassleriana HOM05D001867 ORTHO05D001708 4.9e-07 58.2 93 48.4
Glyma.01G079900 Glycine max HOM05D001867 ORTHO05D001708 6.4e-07 57.8 134 30.6
MD07G1114000 Malus domestica HOM05D001867 ORTHO05D001708 6.4e-07 57.8 104 35.6
Manes.01G081000 Manihot esculenta HOM05D001867 ORTHO05D001708 8.3e-07 57.4 98 39.8
Nn6g33954 Nelumbo nucifera HOM05D001867 ORTHO05D001708 8.3e-07 57.4 95 38.9
vmacro13448 Vaccinium macrocarpon HOM05D001867 ORTHO05D001708 8.3e-07 57.4 86 41.9
Aa31LG10G14860 Aethionema arabicum HOM05D001867 ORTHO05D001708 1.1e-06 57.0 75 45.3
Duzib068G0794 Durio zibethinus HOM05D001867 ORTHO05D001708 1.1e-06 57.0 80 42.5
CiPaw.03G020600 Carya illinoinensis HOM05D001867 ORTHO05D001708 1.4e-06 56.6 97 40.2
ClCG05G000220 Citrullus lanatus HOM05D001867 ORTHO05D001708 1.4e-06 56.6 117 36.8
Migut.B01588 Erythranthe guttata HOM05D001867 ORTHO05D001708 1.4e-06 56.6 110 38.2
MD07G1252200 Malus domestica HOM05D001867 ORTHO05D001708 1.4e-06 56.6 88 38.6
TAR629G0567 Trochodendron aralioides HOM05D001867 ORTHO05D001708 1.4e-06 56.6 94 39.4
VMungo1383G2168 Vigna mungo HOM05D001867 ORTHO05D001708 1.4e-06 56.6 121 32.2
DCAR_015875 Daucus carota HOM05D001867 ORTHO05D001708 1.9e-06 56.2 120 34.2
PGSC0003DMG400020929 Solanum tuberosum HOM05D001867 ORTHO05D001708 1.9e-06 56.2 82 37.8
PGSC0003DMG400026020 Solanum tuberosum HOM05D001867 ORTHO05D001708 1.9e-06 56.2 88 34.1
CDE09G0755 Ceratophyllum demersum HOM05D001867 ORTHO05D001708 2.4e-06 55.8 104 36.5
MSTRG.20726 Avicennia marina HOM05D001867 ORTHO05D001708 3.2e-06 55.5 105 35.2
Eucgr.D02497 Eucalyptus grandis HOM05D001867 ORTHO05D001708 3.2e-06 55.5 102 36.3
Nn1g00990 Nelumbo nucifera HOM05D001867 ORTHO05D001708 3.2e-06 55.5 92 41.3
Rhsim07G0031800 Rhododendron simsii HOM05D001867 ORTHO05D001708 4.1e-06 55.1 86 37.2
Solyc01g090840.3 Solanum lycopersicum HOM05D001867 ORTHO05D001708 4.1e-06 55.1 83 36.1
Sopen01g036570 Solanum pennellii HOM05D001867 ORTHO05D001708 4.1e-06 55.1 83 36.1
Cc02_g24700 Coffea canephora HOM05D001867 ORTHO05D001708 5.4e-06 54.7 97 36.1
Cpa.g.sc29.163 Carica papaya HOM05D001867 ORTHO05D001708 7.1e-06 54.3 80 45.0
ECA236G4312 Erigeron canadensis HOM05D001867 ORTHO05D001708 7.1e-06 54.3 78 35.9
Nitab4.5_0007709g0010 Nicotiana tabacum HOM05D001867 ORTHO05D001708 7.1e-06 54.3 111 34.2


User provided reference genes

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