Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p44800 Brassica napus HOM05D003379 ORTHO05D003862 3.2e-122 441.8 230 100.0
C07p23110 Brassica napus HOM05D003379 ORTHO05D003862 1.1e-106 390.2 230 90.0
C01p04570 Brassica napus HOM05D003379 ORTHO05D003862 2.0e-92 342.8 203 87.7
C09p11640 Brassica napus HOM05D003379 ORTHO05D003862 4.8e-86 321.6 178 92.1
BcaNung03374 Brassica carinata HOM05D003379 ORTHO05D003862 1.8e-72 276.6 230 69.6
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 2.3e-72 276.2 230 68.3
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 3.0e-72 275.8 230 68.7
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 9.8e-71 270.8 230 68.3
BolC7t42848H Brassica oleracea HOM05D003379 ORTHO05D003862 1.0e-67 260.8 232 67.7
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 6.6e-67 258.1 231 66.2
BcaC04g20129 Brassica carinata HOM05D003379 ORTHO05D003862 3.0e-64 249.2 230 65.7
C09p09610 Brassica napus HOM05D003379 ORTHO05D003862 1.7e-54 216.9 123 93.5
C08p33300 Brassica napus HOM05D003379 ORTHO05D003862 2.2e-54 216.5 119 94.1
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 3.7e-54 215.7 231 57.6
C01p51670 Brassica napus HOM05D003379 ORTHO05D003862 8.3e-54 214.5 118 92.4
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 2.4e-53 213.0 234 54.7
BolC1t05110H Brassica oleracea HOM05D003379 ORTHO05D003862 6.0e-52 208.4 123 88.6
C08p31050 Brassica napus HOM05D003379 ORTHO05D003862 4.3e-50 202.2 118 88.1
BolC9t57591H Brassica oleracea HOM05D013459 ORTHO05D018689 5.8e-47 191.8 175 64.0
BolC2t08454H Brassica oleracea HOM05D003379 ORTHO05D003862 1.1e-45 187.6 123 80.5
CARHR200130 Cardamine hirsuta HOM05D003379 ORTHO05D003862 1.4e-45 187.2 231 52.4
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 2.3e-40 169.9 235 46.4
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 4.4e-39 165.6 232 49.6
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 1.4e-37 160.6 228 47.8
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 1.4e-37 160.6 235 46.4
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 3.4e-31 139.4 252 38.9
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 1.7e-30 137.1 249 39.0
BcaC09g48308 Brassica carinata HOM05D003379 ORTHO05D003862 3.8e-22 109.4 53 98.1
C09p60140 Brassica napus HOM05D003379 ORTHO05D003862 2.7e-20 103.2 53 94.3
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 5.6e-18 95.5 248 32.3
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 6.9e-16 88.6 254 31.5
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 1.5e-15 87.4 250 30.8
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 5.8e-15 85.5 245 31.0
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 7.6e-15 85.1 261 29.9
BolC9t53871H Brassica oleracea HOM05D003379 ORTHO05D003862 9.9e-15 84.7 44 95.5
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 1.3e-14 84.3 251 29.5
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 2.9e-14 83.2 246 29.3
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 4.9e-14 82.4 239 29.3
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 6.4e-14 82.0 252 29.8
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 1.9e-13 80.5 244 30.7
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 1.9e-13 80.5 257 30.0
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 1.9e-13 80.5 247 29.6
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 1.9e-13 80.5 251 30.3
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 2.4e-13 80.1 238 30.3
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 4.2e-13 79.3 252 29.0
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 4.2e-13 79.3 260 28.8
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 9.3e-13 78.2 254 29.1
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 9.3e-13 78.2 258 28.7
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 1.6e-12 77.4 237 29.1
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 2.7e-12 76.6 266 30.5
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 1.0e-11 74.7 247 29.1
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 1.0e-11 74.7 233 27.5
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 1.8e-11 73.9 237 29.1
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 2.3e-11 73.6 237 29.5
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 3.9e-11 72.8 262 27.5
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 1.5e-10 70.9 231 29.0
TWI36G1473 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 1.5e-10 70.9 137 38.0
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 2.5e-10 70.1 249 26.9
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 3.3e-10 69.7 265 27.2
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 4.3e-10 69.3 229 29.3
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 5.6e-10 68.9 258 27.9
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 7.4e-10 68.6 131 36.6
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 7.4e-10 68.6 248 27.4
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 2.1e-09 67.0 247 30.0
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 2.1e-09 67.0 238 31.1
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 2.8e-09 66.6 229 29.7
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 3.7e-09 66.2 261 28.7
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 3.7e-09 66.2 252 27.0
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 1.1e-08 64.7 264 27.3
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 1.4e-08 64.3 254 28.0
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 1.8e-08 63.9 257 27.2
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 3.1e-08 63.2 247 27.5
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 3.1e-08 63.2 154 33.8
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 4.0e-08 62.8 262 27.5
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 9.0e-08 61.6 211 28.0
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 2.6e-07 60.1 265 25.3
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 4.5e-07 59.3 152 34.9
BolC3t17016H Brassica oleracea HOM05D003379 ORTHO05D106986 7.6e-07 58.5 50 70.0
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 7.6e-07 58.5 246 27.6
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 7.6e-07 58.5 236 26.7
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 7.6e-07 58.5 247 27.1
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 1.3e-06 57.8 235 29.4
AUR62014693 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.3e-06 57.8 243 25.1
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 2.2e-06 57.0 261 28.0
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 3.8e-06 56.2 256 25.4
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 3.8e-06 56.2 265 24.5
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 8.4e-06 55.1 256 25.8
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 8.4e-06 55.1 258 27.1
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 8.4e-06 55.1 258 26.4


User provided reference genes

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