Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p44540 Brassica napus HOM05D005983 ORTHO05D007438 1.3e-190 669.5 328 100.0
C04p39670 Brassica napus HOM05D005983 ORTHO05D007438 1.7e-145 519.6 314 84.7
BolC4t25537H Brassica oleracea HOM05D005983 ORTHO05D007438 1.7e-145 519.6 314 84.7
BcaC02g09019 Brassica carinata HOM05D005983 ORTHO05D007438 1.1e-118 430.6 215 97.7
C02p21550 Brassica napus HOM05D005983 ORTHO05D007438 2.7e-98 362.8 278 69.1
BcaC09g50403 Brassica carinata HOM05D005983 ORTHO05D007438 1.7e-76 290.4 248 64.9
C01p25880 Brassica napus HOM05D005983 ORTHO05D007438 1.7e-76 290.4 248 64.9
BolC1t02533H Brassica oleracea HOM05D005983 ORTHO05D007438 1.7e-76 290.4 248 64.9
A01p20580 Brassica napus HOM05D005983 ORTHO05D007438 4.9e-76 288.9 248 64.5
BraA01t01986Z Brassica rapa HOM05D005983 ORTHO05D007438 4.9e-76 288.9 248 64.5
Sp7g15340 Schrenkiella parvula HOM05D005983 ORTHO05D007438 3.2e-75 286.2 248 63.7
BcaNung00159 Brassica carinata HOM05D005983 ORTHO05D007438 3.5e-74 282.7 248 64.5
Carub.0007s2469 Capsella rubella HOM05D005983 ORTHO05D007438 3.3e-72 276.2 248 60.9
CARHR223230 Cardamine hirsuta HOM05D005983 ORTHO05D007438 7.4e-72 275.0 240 63.8
AL7G38030 Arabidopsis lyrata HOM05D005983 ORTHO05D007438 1.6e-71 273.9 248 61.3
AT4G16700 Arabidopsis thaliana HOM05D005983 ORTHO05D007438 9.0e-70 268.1 248 59.7
BraA08t34844Z Brassica rapa HOM05D005983 ORTHO05D007438 1.6e-66 257.3 261 55.9
Aa31LG2G12890 Aethionema arabicum HOM05D005983 ORTHO05D007438 8.7e-65 251.5 239 58.6
BcaC03g14715 Brassica carinata HOM05D005983 ORTHO05D007438 2.9e-60 236.5 175 71.4
BolC2t08295H Brassica oleracea HOM05D005983 ORTHO05D007438 1.4e-59 234.2 210 61.9
THA.LOC104815498 Tarenaya hassleriana HOM05D005983 ORTHO05D007438 5.5e-59 232.3 223 57.0
Duzib084G0278 Durio zibethinus HOM05D005983 ORTHO05D007438 3.7e-55 219.5 232 53.4
MBI04_g09520_MAGBIO Magnolia biondii HOM05D005983 ORTHO05D007438 4.8e-55 219.2 251 49.0
Thecc.03G249100 Theobroma cacao HOM05D005983 ORTHO05D007438 4.8e-55 219.2 248 51.2
COL.COLO4_37146 Corchorus olitorius HOM05D005983 ORTHO05D007438 8.2e-55 218.4 232 53.0
HanXRQChr16g0510961 Helianthus annuus HOM05D005983 ORTHO05D007438 1.1e-54 218.0 234 53.4
MD06G1055900 Malus domestica HOM05D005983 ORTHO05D007438 1.4e-54 217.6 245 52.7
Gorai.003G172200 Gossypium raimondii HOM05D005983 ORTHO05D007438 4.1e-54 216.1 234 51.3
Eucgr.E00410 Eucalyptus grandis HOM05D005983 ORTHO05D007438 5.3e-54 215.7 241 52.3
Gohir.A03G007500 Gossypium hirsutum HOM05D005983 ORTHO05D007438 5.3e-54 215.7 234 51.7
Ah.12g054210 Amaranthus hybridus HOM05D005983 ORTHO05D007438 6.9e-54 215.3 243 51.4
Cc08_g12250 Coffea canephora HOM05D005983 ORTHO05D007438 6.9e-54 215.3 227 52.4
TWI15G0813 Tripterygium wilfordii HOM05D005983 ORTHO05D007438 9.1e-54 214.9 226 53.5
Gohir.D03G163500 Gossypium hirsutum HOM05D005983 ORTHO05D007438 1.2e-53 214.5 234 51.3
CAN.G62.33 Capsicum annuum HOM05D005983 ORTHO05D007438 4.5e-53 212.6 244 50.8
Dinv21647 Davidia involucrata HOM05D005983 ORTHO05D007438 4.5e-53 212.6 245 49.4
Manes.01G082200 Manihot esculenta HOM05D005983 ORTHO05D007438 4.5e-53 212.6 227 53.3
Nitab4.5_0000618g0100 Nicotiana tabacum HOM05D005983 ORTHO05D007438 7.7e-53 211.8 269 48.0
CANSAT21G0098 Cannabis sativa HOM05D005983 ORTHO05D007438 1.0e-52 211.5 239 50.6
Prupe.5G066800 Prunus persica HOM05D005983 ORTHO05D007438 1.0e-52 211.5 250 50.0
Solyc06g060780.4 Solanum lycopersicum HOM05D005983 ORTHO05D007438 1.0e-52 211.5 250 49.2
Sopen06g020900 Solanum pennellii HOM05D005983 ORTHO05D007438 1.0e-52 211.5 250 49.2
PGSC0003DMG402011882 Solanum tuberosum HOM05D005983 ORTHO05D007438 1.3e-52 211.1 243 50.6
Rhsim01G0100800 Rhododendron simsii HOM05D005983 ORTHO05D007438 1.7e-52 210.7 225 52.0
Sabra03G0048600 Salix brachista HOM05D005983 ORTHO05D007438 1.7e-52 210.7 228 52.6
Peaxi162Scf01022g00324 Petunia axillaris HOM05D005983 ORTHO05D007438 2.2e-52 210.3 276 47.1
DCAR_004965 Daucus carota HOM05D005983 ORTHO05D007438 6.5e-52 208.8 225 53.3
FAN08G1502 Fragaria x ananassa HOM05D005983 ORTHO05D007438 1.1e-51 208.0 243 51.0
ECA233G1798 Erigeron canadensis HOM05D005983 ORTHO05D007438 1.4e-51 207.6 228 53.9
Ca_24588_v3 Cicer arietinum L. HOM05D005983 ORTHO05D007438 1.9e-51 207.2 243 48.6
FAN04G1995 Fragaria x ananassa HOM05D005983 ORTHO05D007438 2.5e-51 206.8 243 50.6
FvH4_5g19150 Fragaria vesca HOM05D005983 ORTHO05D007438 5.5e-51 205.7 243 50.2
FAN18G0274 Fragaria x ananassa HOM05D005983 ORTHO05D007438 5.5e-51 205.7 243 50.2
EL10Ac5g12377 Beta vulgaris HOM05D005983 ORTHO05D007438 7.2e-51 205.3 244 48.4
Potri.003G078300 Populus trichocarpa HOM05D005983 ORTHO05D007438 9.4e-51 204.9 227 52.9
Glyma.01G207800 Glycine max HOM05D005983 ORTHO05D007438 1.2e-50 204.5 223 51.1
Thhalv10025592m.g Eutrema salsugineum HOM05D005983 ORTHO05D007438 1.6e-50 204.1 145 73.8
Hma1.2p1_0316F.1_g122960 Hydrangea macrophylla HOM05D005983 ORTHO05D007438 1.6e-50 204.1 236 49.6
Lj2g0002324 Lotus japonicus HOM05D005983 ORTHO05D007438 1.6e-50 204.1 225 52.4
AUR62019966 Chenopodium quinoa HOM05D005983 ORTHO05D007438 2.1e-50 203.8 250 47.2
Ciclev10020120m.g Citrus clementina HOM05D005983 ORTHO05D007438 2.1e-50 203.8 230 50.9
Migut.A01119 Erythranthe guttata HOM05D005983 ORTHO05D007438 2.1e-50 203.8 241 49.0
QL12p011684 Quercus lobata HOM05D005983 ORTHO05D007438 2.1e-50 203.8 273 46.5
AUR62007103 Chenopodium quinoa HOM05D005983 ORTHO05D007438 2.7e-50 203.4 250 47.2
TPR.G18111 Trifolium pratense HOM05D005983 ORTHO05D007438 2.7e-50 203.4 226 50.9
RcHm_v2.0_Chr7g0203641 Rosa chinensis HOM05D005983 ORTHO05D007438 3.6e-50 203.0 243 50.6
CiPaw.11G080800 Carya illinoinensis HOM05D005983 ORTHO05D007438 4.7e-50 202.6 250 46.8
PSO357G0330 Papaver somniferum HOM05D005983 ORTHO05D007438 4.7e-50 202.6 225 51.1
Lalb_Chr05g0214371 Lupinus albus HOM05D005983 ORTHO05D007438 6.1e-50 202.2 244 48.0
Sed0010070 Sechium edule HOM05D005983 ORTHO05D007438 6.1e-50 202.2 228 50.9
MELO3C005523.2 Cucumis melo HOM05D005983 ORTHO05D007438 7.9e-50 201.8 228 50.0
Sc01g0008340 Simmondsia chinensis HOM05D005983 ORTHO05D007438 1.0e-49 201.4 216 54.2
Medtr5g012880 Medicago truncatula HOM05D005983 ORTHO05D007438 1.4e-49 201.1 226 51.8
PSO170G1657 Papaver somniferum HOM05D005983 ORTHO05D007438 1.4e-49 201.1 225 51.1
Aqoxy5G03845 Aquilegia oxysepala HOM05D005983 ORTHO05D007438 2.3e-49 200.3 227 51.1
Nn1g00952 Nelumbo nucifera HOM05D005983 ORTHO05D007438 2.3e-49 200.3 242 46.7
VMungo1215G0088 Vigna mungo HOM05D005983 ORTHO05D007438 2.3e-49 200.3 226 51.8
arahy.Tifrunner.gnm1.ann1.NE97L5 Arachis hypogaea HOM05D005983 ORTHO05D007438 5.2e-49 199.1 246 49.2
CsaV3_5G004310 Cucumis sativus L. HOM05D005983 ORTHO05D007438 6.7e-49 198.7 228 48.7
Psat2g176840 Pisum sativum HOM05D005983 ORTHO05D007438 6.7e-49 198.7 226 50.4
CSS0015193 Camellia sinensis var. sinensis HOM05D005983 ORTHO05D007438 8.8e-49 198.4 280 45.0
Phvul.002G057200 Phaseolus vulgaris HOM05D005983 ORTHO05D007438 1.5e-48 197.6 226 50.9
Sed0018188 Sechium edule HOM05D005983 ORTHO05D007438 2.6e-48 196.8 228 49.6
PGR042G2168 Punica granatum HOM05D005983 ORTHO05D007438 5.7e-48 195.7 228 49.1
unitig_744.g24471 Utricularia gibba HOM05D005983 ORTHO05D007438 2.2e-47 193.7 227 50.2
GSVIVG01004724001 Vitis vinifera HOM05D005983 ORTHO05D007438 2.2e-47 193.7 218 50.9
Lsat_1_v5_gn_6_18021 Lactuca sativa HOM05D005983 ORTHO05D007438 2.8e-47 193.4 238 50.8
SalBow6G6019 Salvia bowleyana HOM05D005983 ORTHO05D007438 3.7e-47 193.0 291 44.0
Atru.chr9.1290 Acer truncatum HOM05D005983 ORTHO05D007438 4.8e-47 192.6 173 57.8
Cpa.g.sc29.178 Carica papaya HOM05D005983 ORTHO05D007438 8.2e-47 191.8 174 58.6
arahy.Tifrunner.gnm1.ann1.0NSC2B Arachis hypogaea HOM05D005983 ORTHO05D007438 3.1e-46 189.9 188 56.9
TAR713G0001 Trochodendron aralioides HOM05D005983 ORTHO05D007438 5.3e-46 189.1 173 59.0
Hund14571 Selenicereus undatus HOM05D005983 ORTHO05D007438 7.0e-46 188.7 218 50.5
HPP92_015120 Vanilla planifolia HOM05D005983 ORTHO05D007438 1.2e-45 188.0 239 45.6
Os03g0101900 Oryza sativa ssp. japonica HOM05D005983 ORTHO05D007438 5.0e-44 182.6 228 45.2
BcaC03g14714 Brassica carinata HOM05D005983 ORTHO05D032351 4.7e-42 176.0 90 94.4
Actinidia14415 Actinidia chinensis HOM05D005983 ORTHO05D007438 6.1e-42 175.6 172 53.5
CDE04G1583 Ceratophyllum demersum HOM05D005983 ORTHO05D007438 3.0e-41 173.3 223 47.5
Nitab4.5_0001076g0010 Nicotiana tabacum HOM05D005983 ORTHO05D007438 1.2e-40 171.4 245 44.9
ATR0317G025 Amborella trichopoda HOM05D005983 ORTHO05D007438 3.3e-40 169.9 219 44.3
SGA_v2.0_scaffold104G30169 Striga asiatica HOM05D005983 ORTHO05D007438 5.7e-40 169.1 325 36.9
Pp3c10_660 Physcomitrium patens HOM05D005983 ORTHO05D007438 1.6e-37 161.0 223 44.4
Actinidia02144 Actinidia chinensis HOM05D005983 ORTHO05D007438 2.7e-37 160.2 137 58.4
vmacro00190 Vaccinium macrocarpon HOM05D005983 ORTHO05D007438 3.8e-36 156.4 178 50.6
ClCG01G004150 Citrullus lanatus HOM05D005983 ORTHO05D007438 2.5e-35 153.7 238 40.8
Mapoly0144s0014 Marchantia polymorpha HOM05D005983 ORTHO05D007438 5.5e-35 152.5 229 41.9
CBR_g40206 Chara braunii HOM05D005983 ORTHO05D007438 7.5e-32 142.1 230 39.1
BcaC07g42540 Brassica carinata HOM05D005983 ORTHO05D007438 1.4e-30 137.9 119 62.2
Duzib205G1394 Durio zibethinus HOM05D005983 ORTHO05D007438 3.5e-29 133.3 247 38.9
SMO351G0559 Selaginella moellendorffii HOM05D005983 ORTHO05D007438 3.2e-27 126.7 210 39.5
Lj2A220G36 Lonicera japonica HOM05D005983 ORTHO05D007438 7.3e-19 99.0 104 53.8
BcaC02g09018 Brassica carinata HOM05D005983 ORTHO05D032351 1.6e-18 97.8 49 98.0
Haze_01069 Corylus avellana HOM05D005983 ORTHO05D007438 1.8e-17 94.4 111 50.5
Cfa023268 Carpinus fangiana HOM05D005983 ORTHO05D007438 1.1e-14 85.1 79 50.6
Glyma.11G034500 Glycine max HOM05D005983 ORTHO05D007438 4.1e-14 83.2 102 46.1
BraA03t09785Z Brassica rapa HOM05D005983 ORTHO05D032351 7.0e-14 82.4 42 85.7
PRCOL_00002495 Prasinoderma coloniale HOM05D000251 ORTHO05D007438 1.6e-13 81.3 207 30.9
Haze_01067 Corylus avellana HOM05D005983 ORTHO05D007438 5.6e-11 72.8 100 46.0
vmacro00191 Vaccinium macrocarpon HOM05D005983 ORTHO05D007438 4.0e-09 66.6 79 45.6
Pp3s32_287 Physcomitrium patens HOM05D003620 ORTHO05D007438 5.8e-08 62.8 198 26.8
Lj2A220G37 Lonicera japonica HOM05D005983 ORTHO05D007438 3.7e-07 60.1 84 44.0


User provided reference genes

Program Settings