Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p44350 Brassica napus HOM05D000977 ORTHO05D001094 9.7e-141 503.4 248 100.0
BolC8t48638H Brassica oleracea HOM05D000977 ORTHO05D001094 6.8e-102 374.4 236 78.8
BcaC07g37010 Brassica carinata HOM05D000977 ORTHO05D001094 6.0e-66 255.0 305 45.9
BcaC08g44291 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-62 244.2 305 44.6
BcaC09g50777 Brassica carinata HOM05D000977 ORTHO05D001094 1.8e-62 243.4 305 45.2
BcaC05g28638 Brassica carinata HOM05D000977 ORTHO05D001094 3.1e-62 242.7 305 44.6
BcaC04g21434 Brassica carinata HOM05D000977 ORTHO05D001094 2.0e-61 240.0 305 43.9
BolC5t31468H Brassica oleracea HOM05D000977 ORTHO05D001094 2.5e-56 223.0 289 43.3
BcaB06g29565 Brassica carinata HOM05D000977 ORTHO05D001094 1.8e-54 216.9 266 45.1
BcaC04g21808 Brassica carinata HOM05D000977 ORTHO05D001094 9.0e-54 214.5 292 43.2
BcaC05g27348 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-47 194.1 305 39.0
BcaC03g16184 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-46 191.0 292 41.4
BcaB06g28651 Brassica carinata HOM05D000977 ORTHO05D001094 9.0e-38 161.4 92 76.1
BolC8t47990H Brassica oleracea HOM05D000977 ORTHO05D001094 3.8e-36 156.0 91 74.7
BolC9t54029H Brassica oleracea HOM05D000977 ORTHO05D001094 4.9e-36 155.6 155 52.3
BolC6t36539H Brassica oleracea HOM05D000977 ORTHO05D001094 4.2e-35 152.5 153 52.3
AL1G57050 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 2.3e-33 146.7 299 32.4
AL5G16890 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 3.0e-33 146.4 299 32.4
AL1G58670 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 6.7e-33 145.2 299 32.1
AL1G58560 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 8.7e-33 144.8 299 32.1
AL5G27080 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 8.7e-33 144.8 299 31.8
AL1G30000 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 4.3e-32 142.5 299 31.8
AL8G14210 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 5.6e-32 142.1 303 31.4
Carub.0007s3164 Capsella rubella HOM05D000977 ORTHO05D001094 4.8e-31 139.0 300 32.3
BolC9t55635H Brassica oleracea HOM05D000977 ORTHO05D001094 6.9e-30 135.2 218 37.2
BolC4t25105H Brassica oleracea HOM05D000977 ORTHO05D001094 1.2e-26 124.4 301 27.6
BolC5t34129H Brassica oleracea HOM05D000977 ORTHO05D001094 1.6e-26 124.0 65 89.2
BcaB08g35410 Brassica carinata HOM05D000977 ORTHO05D001094 3.5e-26 122.9 304 28.0
BolC3t20156H Brassica oleracea HOM05D000977 ORTHO05D001094 3.5e-26 122.9 132 53.0
BolC9t57183H Brassica oleracea HOM05D000977 ORTHO05D001094 7.9e-26 121.7 326 27.0
C01p42930 Brassica napus HOM05D000977 ORTHO05D001094 1.8e-25 120.6 132 52.3
BraA03t15713Z Brassica rapa HOM05D000977 ORTHO05D001094 3.0e-25 119.8 156 43.6
BolC5t33108H Brassica oleracea HOM05D000977 ORTHO05D001094 8.7e-25 118.2 155 41.3
BcaB03g14367 Brassica carinata HOM05D000977 ORTHO05D001094 2.5e-24 116.7 304 27.0
C03p69480 Brassica napus HOM05D000977 ORTHO05D001094 4.3e-24 115.9 129 51.9
Carub.0008s0688 Capsella rubella HOM05D000977 ORTHO05D001094 4.3e-24 115.9 267 31.8
BolC5t31974H Brassica oleracea HOM05D000977 ORTHO05D001094 2.2e-23 113.6 251 32.7
Carub.0002s0947 Capsella rubella HOM05D000977 ORTHO05D001094 6.3e-23 112.1 260 31.9
BcaC09g50525 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-22 111.3 304 27.3
BolC2t11220H Brassica oleracea HOM05D000977 ORTHO05D001094 2.4e-22 110.2 304 27.3
BolC2t08846H Brassica oleracea HOM05D000977 ORTHO05D001094 3.1e-22 109.8 291 30.2
BolC8t47282H Brassica oleracea HOM05D000977 ORTHO05D001094 3.1e-22 109.8 218 33.5
Thhalv10002232m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 1.5e-21 107.5 278 25.5
BcaB06g29622 Brassica carinata HOM05D000977 ORTHO05D001094 5.9e-21 105.5 303 26.1
Thhalv10000674m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 2.2e-20 103.6 270 26.3
C09p43120 Brassica napus HOM05D000977 ORTHO05D001094 5.0e-20 102.4 285 25.6
BolC8t50327H Brassica oleracea HOM05D000977 ORTHO05D001094 8.5e-20 101.7 205 29.8
BolC1t04517H Brassica oleracea HOM05D000977 ORTHO05D001094 1.1e-19 101.3 244 28.3
Thhalv10000524m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 1.1e-19 101.3 270 26.3
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 1.4e-19 100.9 304 26.3
Carub.0007s3162 Capsella rubella HOM05D000977 ORTHO05D001094 1.4e-19 100.9 87 58.6
BolC3t15821H Brassica oleracea HOM05D000977 ORTHO05D001094 3.2e-19 99.8 278 27.3
BcaC07g36913 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-18 97.8 301 25.6
BcaC05g27350 Brassica carinata HOM05D000977 ORTHO05D001094 1.6e-18 97.4 304 24.7
AT2G07190 Arabidopsis thaliana HOM05D000977 ORTHO05D001094 2.1e-18 97.1 80 55.0
BolC9t56600H Brassica oleracea HOM05D000977 ORTHO05D001094 7.9e-18 95.1 106 46.2
BolC3t15509H Brassica oleracea HOM05D000977 ORTHO05D001094 1.0e-17 94.7 175 35.4
BolC4t27564H Brassica oleracea HOM05D000977 ORTHO05D001094 1.8e-17 94.0 106 46.2
C03p78210 Brassica napus HOM05D000977 ORTHO05D001094 3.0e-17 93.2 205 29.8
BolC5t33624H Brassica oleracea HOM05D000977 ORTHO05D001094 3.0e-17 93.2 272 28.7
BolC3t19702H Brassica oleracea HOM05D000977 ORTHO05D001094 5.1e-17 92.4 103 49.5
BolC7t41539H Brassica oleracea HOM05D000977 ORTHO05D001094 8.8e-17 91.7 221 31.2
BcaC09g49808 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-16 91.3 294 27.2
Thhalv10000631m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 1.5e-16 90.9 124 37.1
BolC8t47989H Brassica oleracea HOM05D000977 ORTHO05D001094 2.0e-16 90.5 61 72.1
C06p07370 Brassica napus HOM05D000977 ORTHO05D001094 3.3e-16 89.7 104 49.0
BolSC21t60291H Brassica oleracea HOM05D000977 ORTHO05D001094 4.3e-16 89.4 106 44.3
Carub.0027s0003 Capsella rubella HOM05D000977 ORTHO05D001094 4.3e-16 89.4 210 30.5
BolC6t36171H Brassica oleracea HOM05D000977 ORTHO05D001094 5.7e-16 89.0 251 25.9
BraA09t38566Z Brassica rapa HOM05D000977 ORTHO05D001094 9.7e-16 88.2 79 51.9
BcaC06g36215 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-15 87.0 304 23.0
BolC6t36478H Brassica oleracea HOM05D000977 ORTHO05D001094 2.2e-15 87.0 103 41.7
BcaC02g10149 Brassica carinata HOM05D000977 ORTHO05D001094 2.8e-15 86.7 304 23.0
BcaC03g15482 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-15 85.5 95 45.3
BolC8t48388H Brassica oleracea HOM05D000977 ORTHO05D001094 8.2e-15 85.1 103 41.7
BcaC02g09848 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-14 84.7 293 22.5
Thhalv10012268m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 2.4e-14 83.6 172 32.6
Thhalv10002788m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 6.9e-14 82.0 125 36.8
BcaC02g10227 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-13 81.3 258 26.7
C06p02270 Brassica napus HOM05D000977 ORTHO05D001094 1.2e-13 81.3 147 34.7
Thhalv10027085m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 1.5e-13 80.9 195 25.6
BcaC06g35928 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-13 80.1 103 40.8
BolC7t41395H Brassica oleracea HOM05D000977 ORTHO05D001094 2.6e-13 80.1 103 40.8
Thhalv10017736m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 3.4e-13 79.7 184 26.6
BolC9t55670H Brassica oleracea HOM05D000977 ORTHO05D001094 5.9e-13 79.0 101 43.6
A05p16280 Brassica napus HOM05D000977 ORTHO05D001094 1.0e-12 78.2 147 34.0
A06p02270 Brassica napus HOM05D000977 ORTHO05D001094 1.0e-12 78.2 147 34.0
C03p54170 Brassica napus HOM05D000977 ORTHO05D001094 1.0e-12 78.2 147 34.0
Carub.0004s0699 Capsella rubella HOM05D000977 ORTHO05D001094 1.0e-12 78.2 188 31.4
C03p31660 Brassica napus HOM05D000977 ORTHO05D001094 1.3e-12 77.8 168 33.9
Sp1g31020 Schrenkiella parvula HOM05D000977 ORTHO05D001094 1.7e-12 77.4 151 33.1
BcaB07g33073 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-12 77.0 98 40.8
BraA10t43802Z Brassica rapa HOM05D000977 ORTHO05D001094 2.2e-12 77.0 183 31.1
Thhalv10021960m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 2.2e-12 77.0 105 40.0
BcaC02g12311 Brassica carinata HOM05D000977 ORTHO05D001094 2.9e-12 76.6 78 46.2
BolC1t02514H Brassica oleracea HOM05D000977 ORTHO05D001094 3.8e-12 76.3 217 30.0
BraA04t16482Z Brassica rapa HOM05D000977 ORTHO05D001094 6.5e-12 75.5 246 24.0
Sp4g06570 Schrenkiella parvula HOM05D000977 ORTHO05D001094 6.5e-12 75.5 67 49.3
AL3G51940 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 1.4e-11 74.3 173 28.9
CARHR119610 Cardamine hirsuta HOM05D000977 ORTHO05D001094 1.4e-11 74.3 61 52.5
BcaC08g44528 Brassica carinata HOM05D000977 ORTHO05D001094 9.4e-11 71.6 91 41.8
Thhalv10027125m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 1.6e-10 70.9 103 35.0
BolC5t32181H Brassica oleracea HOM05D000977 ORTHO05D001094 3.6e-10 69.7 304 21.7
BcaNung02690 Brassica carinata HOM05D001953 ORTHO05D001904 6.1e-10 68.9 68 60.3
Thhalv10002248m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 6.1e-10 68.9 168 26.2
C04p44910 Brassica napus HOM05D000977 ORTHO05D001094 1.4e-09 67.8 155 28.4
BcaC05g28524 Brassica carinata HOM05D000977 ORTHO05D001094 5.1e-09 65.9 49 63.3
BolC7t40988H Brassica oleracea HOM05D000977 ORTHO05D001094 5.1e-09 65.9 147 30.6
BcaC03g13938 Brassica carinata HOM05D000977 ORTHO05D001094 6.7e-09 65.5 60 56.7
BcaC09g51271 Brassica carinata HOM05D000977 ORTHO05D001094 6.7e-09 65.5 150 26.7
BcaC09g50384 Brassica carinata HOM05D000977 ORTHO05D001094 8.8e-09 65.1 89 38.2
BolC2t09447H Brassica oleracea HOM05D000977 ORTHO05D001094 8.8e-09 65.1 89 38.2
BraA09t38605Z Brassica rapa HOM05D000977 ORTHO05D001094 1.5e-08 64.3 154 29.9
Thhalv10019765m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 1.5e-08 64.3 63 42.9
AL4G20020 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 3.3e-08 63.2 53 54.7
BraA07t28145Z Brassica rapa HOM05D000977 ORTHO05D001094 3.3e-08 63.2 116 27.6
BolC6t36562H Brassica oleracea HOM05D000977 ORTHO05D001094 4.4e-08 62.8 152 25.7
BcaB06g27532 Brassica carinata HOM05D008883 ORTHO05D011075 5.7e-08 62.4 45 64.4
BcaC01g01703 Brassica carinata HOM05D000977 ORTHO05D001094 7.4e-08 62.0 37 70.3
BcaNung06057 Brassica carinata HOM05D000977 ORTHO05D001094 7.4e-08 62.0 37 70.3
BolC9t57660H Brassica oleracea HOM05D000977 ORTHO05D001094 7.4e-08 62.0 249 22.1
BcaB04g17253 Brassica carinata HOM05D000977 ORTHO05D001094 9.7e-08 61.6 65 44.6
BcaC04g22822 Brassica carinata HOM05D000977 ORTHO05D001094 1.7e-07 60.8 143 26.6
A04p14250 Brassica napus HOM05D000977 ORTHO05D001094 1.7e-07 60.8 64 42.2
BcaB01g02120 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-07 60.5 91 36.3
BcaC03g14983 Brassica carinata HOM05D000977 ORTHO05D001094 2.8e-07 60.1 64 39.1
BcaC08g46177 Brassica carinata HOM05D000977 ORTHO05D001094 3.7e-07 59.7 160 30.6
BolC1t03673H Brassica oleracea HOM05D000977 ORTHO05D001094 3.7e-07 59.7 64 40.6
BolC4t24821H Brassica oleracea HOM05D000977 ORTHO05D010766 3.7e-07 59.7 124 34.7
Thhalv10015425m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 3.7e-07 59.7 53 45.3
BcaC04g19406 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-07 59.3 37 64.9
CARHR254760 Cardamine hirsuta HOM05D000977 ORTHO05D001094 6.3e-07 58.9 54 48.1
BolC4t27566H Brassica oleracea HOM05D000977 ORTHO05D001094 2.4e-06 57.0 132 26.5
BolC9t55864H Brassica oleracea HOM05D000977 ORTHO05D001094 2.4e-06 57.0 110 32.7
BcaC09g49565 Brassica carinata HOM05D000977 ORTHO05D001094 5.3e-06 55.8 97 34.0
C06p04110 Brassica napus HOM05D000977 ORTHO05D001094 5.3e-06 55.8 56 50.0
BolC1t04278H Brassica oleracea HOM05D000977 ORTHO05D001094 9.1e-06 55.1 129 28.7
BolC3t19005H Brassica oleracea HOM05D000977 ORTHO05D039581 9.1e-06 55.1 158 27.8


User provided reference genes

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