Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p42590 Brassica napus HOM05D008825 ORTHO05D017243 4.4e-38 160.6 71 100.0
C08p07220 Brassica napus HOM05D008316 ORTHO05D017243 5.4e-36 153.7 70 94.3
C02p14940 Brassica napus HOM05D008316 ORTHO05D021631 2.5e-33 144.8 71 90.1
A08p06570 Brassica napus HOM05D008825 ORTHO05D017243 1.2e-32 142.5 71 90.1
BraA08t32673Z Brassica rapa HOM05D008825 ORTHO05D017243 1.2e-32 142.5 71 90.1
BolC9t56607H Brassica oleracea HOM05D008825 ORTHO05D017243 7.0e-28 126.7 61 91.8
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 3.3e-25 117.9 71 70.4
BraA09t38864Z Brassica rapa HOM05D003554 ORTHO05D017243 2.6e-22 108.2 53 86.8
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 1.6e-19 99.0 50 82.0
BcaC01g04710 Brassica carinata HOM05D008825 ORTHO05D013031 1.3e-18 95.9 50 76.0
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 3.0e-18 94.7 50 76.0
BcaB05g24479 Brassica carinata HOM05D008316 ORTHO05D017243 3.9e-18 94.4 50 76.0
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 1.1e-17 92.8 50 74.0
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 4.9e-13 77.4 71 53.5
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 2.4e-12 75.1 67 55.2
Carub.0002s1014 Capsella rubella HOM05D003554 ORTHO05D005130 3.2e-12 74.7 67 55.2
BolC7t42791H Brassica oleracea HOM05D008825 ORTHO05D005130 2.1e-11 72.0 32 93.8
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 3.5e-11 71.2 45 66.7
Carub.0004s0685 Capsella rubella HOM05D003554 ORTHO05D005130 3.5e-11 71.2 67 53.7
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 1.7e-10 68.9 70 48.6
BolC3t19531H Brassica oleracea HOM05D003554 ORTHO05D005130 3.9e-10 67.8 70 45.7
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 8.6e-10 66.6 53 54.7
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 8.6e-10 66.6 53 54.7
C02p57980 Brassica napus HOM05D017905 ORTHO05D017243 1.1e-09 66.2 39 71.8
Aa31sc129G60 Aethionema arabicum HOM05D003554 ORTHO05D005130 4.3e-09 64.3 70 44.3
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 4.3e-09 64.3 67 47.8
BcaB08g35337 Brassica carinata HOM05D003554 ORTHO05D005130 5.6e-09 63.9 50 56.0
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 9.5e-09 63.2 67 46.3
C02p33250 Brassica napus HOM05D003554 ORTHO05D005130 9.5e-09 63.2 67 41.8
BcaB04g17902 Brassica carinata HOM05D003554 ORTHO05D005130 1.2e-08 62.8 50 54.0
Aa31LG10G9030 Aethionema arabicum HOM05D003554 ORTHO05D008395 2.1e-08 62.0 56 51.8
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 2.1e-08 62.0 68 45.6
BcaB07g31822 Brassica carinata HOM05D003554 ORTHO05D032345 2.8e-08 61.6 53 50.9
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 6.2e-08 60.5 54 50.0
C02p40540 Brassica napus HOM05D007984 ORTHO05D014515 1.1e-07 59.7 50 54.0
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 1.1e-07 59.7 68 47.1
Carub.0002s1016 Capsella rubella HOM05D003554 ORTHO05D005130 1.4e-07 59.3 47 57.4
Aa31sc111G40 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.8e-07 58.9 65 46.2
BcaB01g02862 Brassica carinata HOM05D003554 ORTHO05D005130 1.8e-07 58.9 48 54.2
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 1.8e-07 58.9 68 47.1
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 1.8e-07 58.9 68 47.1
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 1.8e-07 58.9 68 47.1
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 3.1e-07 58.2 68 47.1
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 4.0e-07 57.8 45 57.8
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 6.8e-07 57.0 45 60.0
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 8.9e-07 56.6 68 45.6
BcaB03g16082 Brassica carinata HOM05D026233 ORTHO05D005130 1.2e-06 56.2 67 40.3
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 2.6e-06 55.1 45 57.8
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 2.6e-06 55.1 45 57.8
Aa31LG6G9990 Aethionema arabicum HOM05D003554 ORTHO05D005130 7.6e-06 53.5 67 41.8


User provided reference genes

Program Settings